RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 C15orf32Q32M92 178 aa13.11□□□□□ -0.31
SGMS1-204ENST00000492601 CASC10Q5T4H9 136 aa13.11□□□□□ -0.31
SGMS1-204ENST00000492601 LCN12Q6JVE5 192 aa13.11□□□□□ -0.31
SGMS1-204ENST00000492601 ZNF66Q6ZN08 573 aa13.11□□□□□ -0.31
SGMS1-204ENST00000492601 PUSL1Q8N0Z8 303 aaKnown RBP13.11□□□□□ -0.31
SGMS1-204ENST00000492601 NECAP1Q8NC96 275 aa13.11□□□□□ -0.31
SGMS1-204ENST00000492601 OR13F1Q8NGS4 319 aa13.11□□□□□ -0.31
SGMS1-204ENST00000492601 VSTM2AQ8TAG5 236 aa13.11□□□□□ -0.31
SGMS1-204ENST00000492601 TMEM167AQ8TBQ9 72 aa13.11□□□□□ -0.31
SGMS1-204ENST00000492601 PEMTQ9UBM1 199 aa13.11□□□□□ -0.31
SGMS1-204ENST00000492601 ZNF257Q9Y2Q1 563 aa13.11□□□□□ -0.31
SGMS1-204ENST00000492601 STARD9Q9P2P6 4700 aa13.11□□□□□ -0.31
SGMS1-204ENST00000492601 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.1□□□□□ -0.31
SGMS1-204ENST00000492601 A0A1B0GW64 132 aa13.1□□□□□ -0.31
SGMS1-204ENST00000492601 A8MZ25 164 aa13.1□□□□□ -0.31
SGMS1-204ENST00000492601 SCAND1P57086 179 aa13.1□□□□□ -0.31
SGMS1-204ENST00000492601 GTSCR1Q86UQ5 136 aa13.1□□□□□ -0.31
SGMS1-204ENST00000492601 SLC25A42Q86VD7 318 aa13.1□□□□□ -0.31
SGMS1-204ENST00000492601 HOGA1Q86XE5 327 aa13.1□□□□□ -0.31
SGMS1-204ENST00000492601 Q8N402 240 aa13.1□□□□□ -0.31
SGMS1-204ENST00000492601 THAP7Q9BT49 309 aaPredicted RBP13.1□□□□□ -0.31
SGMS1-204ENST00000492601 AUNIPQ9H7T9 357 aa13.1□□□□□ -0.31
SGMS1-204ENST00000492601 SIGLEC8Q9NYZ4 499 aa13.1□□□□□ -0.31
SGMS1-204ENST00000492601 MEIS3P1A6NDR6 274 aa13.09□□□□□ -0.31
SGMS1-204ENST00000492601 HRASP01112 189 aa13.09□□□□□ -0.31
SGMS1-204ENST00000492601 IGHV3-23P01764 117 aa13.09□□□□□ -0.31
SGMS1-204ENST00000492601 HLA-AP01891 365 aaKnown RBP13.09□□□□□ -0.31
SGMS1-204ENST00000492601 MYOD1P15172 320 aa13.09□□□□□ -0.31
SGMS1-204ENST00000492601 AREGP15514 252 aa13.09□□□□□ -0.31
SGMS1-204ENST00000492601 FXYD4P59646 89 aa13.09□□□□□ -0.31
SGMS1-204ENST00000492601 ADAMTSL5Q6ZMM2 481 aa13.09□□□□□ -0.31
SGMS1-204ENST00000492601 DIABLOQ9NR28 239 aa13.09□□□□□ -0.31
SGMS1-204ENST00000492601 FBXL7Q9UJT9 491 aa13.09□□□□□ -0.31
SGMS1-204ENST00000492601 S4R3C0 116 aa13.09□□□□□ -0.31
SGMS1-204ENST00000492601 RYR2Q92736 4967 aa13.09□□□□□ -0.31
SGMS1-204ENST00000492601 A0A0A6YYH2 397 aa13.08□□□□□ -0.32
SGMS1-204ENST00000492601 A6NJ64 397 aa13.08□□□□□ -0.32
SGMS1-204ENST00000492601 NPIPB5A8MRT5 1133 aa13.08□□□□□ -0.32
SGMS1-204ENST00000492601 AIREO43918 545 aa13.08□□□□□ -0.32
SGMS1-204ENST00000492601 PPYP01298 95 aa13.08□□□□□ -0.32
SGMS1-204ENST00000492601 ZNF735P0CB33 412 aa13.08□□□□□ -0.32
SGMS1-204ENST00000492601 LYL1P12980 280 aa13.08□□□□□ -0.32
SGMS1-204ENST00000492601 EDN2P20800 178 aa13.08□□□□□ -0.32
SGMS1-204ENST00000492601 MAS1LP35410 378 aa13.08□□□□□ -0.32
SGMS1-204ENST00000492601 TGFBR1P36897 503 aa13.08□□□□□ -0.32
SGMS1-204ENST00000492601 KIR2DS2P43631 304 aa13.08□□□□□ -0.32
SGMS1-204ENST00000492601 SPAG16Q8N0X2 631 aa13.08□□□□□ -0.32
SGMS1-204ENST00000492601 CITED4Q96RK1 184 aa13.08□□□□□ -0.32
SGMS1-204ENST00000492601 SLC5A7Q9GZV3 580 aa13.08□□□□□ -0.32
SGMS1-204ENST00000492601 TUBA4BQ9H853 241 aa13.08□□□□□ -0.32
SGMS1-204ENST00000492601 SLC2A9Q9NRM0 540 aa13.08□□□□□ -0.32
SGMS1-204ENST00000492601 SULT1C2O00338 296 aa13.07□□□□□ -0.32
SGMS1-204ENST00000492601 NDUFB8O95169 186 aa13.07□□□□□ -0.32
SGMS1-204ENST00000492601 OR2C1O95371 312 aa13.07□□□□□ -0.32
SGMS1-204ENST00000492601 REG1AP05451 166 aa13.07□□□□□ -0.32
SGMS1-204ENST00000492601 MECP2P51608 486 aaKnown RBP13.07□□□□□ -0.32
SGMS1-204ENST00000492601 RPL8P62917 257 aaKnown RBP13.07□□□□□ -0.32
SGMS1-204ENST00000492601 HAGHQ16775 308 aa13.07□□□□□ -0.32
SGMS1-204ENST00000492601 CD300EQ496F6 205 aaPredicted RBP13.07□□□□□ -0.32
SGMS1-204ENST00000492601 OR4A47Q6IF82 309 aa13.07□□□□□ -0.32
SGMS1-204ENST00000492601 TMEM17Q86X19 198 aa13.07□□□□□ -0.32
SGMS1-204ENST00000492601 FANCD2OSQ96PS1 177 aa13.07□□□□□ -0.32
SGMS1-204ENST00000492601 HRASLSQ9HDD0 168 aa13.07□□□□□ -0.32
SGMS1-204ENST00000492601 PALMDQ9NP74 551 aa13.07□□□□□ -0.32
SGMS1-204ENST00000492601 DMRT1Q9Y5R6 373 aa13.07□□□□□ -0.32
SGMS1-204ENST00000492601 HLA-GP17693 338 aa13.06□□□□□ -0.32
SGMS1-204ENST00000492601 PSMB6P28072 239 aa13.06□□□□□ -0.32
SGMS1-204ENST00000492601 CD81P60033 236 aa13.06□□□□□ -0.32
SGMS1-204ENST00000492601 MSMO1Q15800 293 aa13.06□□□□□ -0.32
SGMS1-204ENST00000492601 TIMM50Q3ZCQ8 353 aa13.06□□□□□ -0.32
SGMS1-204ENST00000492601 KCTD21Q4G0X4 260 aa13.06□□□□□ -0.32
SGMS1-204ENST00000492601 ZFAND6Q6FIF0 208 aa13.06□□□□□ -0.32
SGMS1-204ENST00000492601 ZBTB34Q8NCN2 500 aa13.06□□□□□ -0.32
SGMS1-204ENST00000492601 OR2K2Q8NGT1 345 aa13.06□□□□□ -0.32
SGMS1-204ENST00000492601 DYNLRB2Q8TF09 96 aa13.06□□□□□ -0.32
SGMS1-204ENST00000492601 KCTD12Q96CX2 325 aaKnown RBP13.06□□□□□ -0.32
SGMS1-204ENST00000492601 SPATA25Q9BR10 227 aa13.06□□□□□ -0.32
SGMS1-204ENST00000492601 PLEKHA3Q9HB20 300 aa13.06□□□□□ -0.32
SGMS1-204ENST00000492601 SELENOKQ9Y6D0 94 aa13.06□□□□□ -0.32
SGMS1-204ENST00000492601 LYSTQ99698 3801 aa13.06□□□□□ -0.32
SGMS1-204ENST00000492601 TRAV3A0A0B4J244 114 aa13.05□□□□□ -0.32
SGMS1-204ENST00000492601 C2orf70A6NJV1 201 aa13.05□□□□□ -0.32
SGMS1-204ENST00000492601 GGCTO75223 188 aaKnown RBP13.05□□□□□ -0.32
SGMS1-204ENST00000492601 CRYGCP07315 174 aa13.05□□□□□ -0.32
SGMS1-204ENST00000492601 ARL3P36405 182 aa13.05□□□□□ -0.32
SGMS1-204ENST00000492601 CBX5P45973 191 aa13.05□□□□□ -0.32
SGMS1-204ENST00000492601 CLEC19AQ6UXS0 136 aa13.05□□□□□ -0.32
SGMS1-204ENST00000492601 ZNF818PQ6ZRF7 136 aa13.05□□□□□ -0.32
SGMS1-204ENST00000492601 OR5AP2Q8NGF4 316 aa13.05□□□□□ -0.32
SGMS1-204ENST00000492601 OR51H1Q8NH63 302 aa13.05□□□□□ -0.32
SGMS1-204ENST00000492601 CCDC140Q96MF4 163 aa13.05□□□□□ -0.32
SGMS1-204ENST00000492601 IFT46Q9NQC8 304 aa13.05□□□□□ -0.32
SGMS1-204ENST00000492601 BET1LQ9NYM9 111 aa13.05□□□□□ -0.32
SGMS1-204ENST00000492601 CGB1A6NKQ9 187 aa13.04□□□□□ -0.32
SGMS1-204ENST00000492601 ZNF785A8K8V0 405 aa13.04□□□□□ -0.32
SGMS1-204ENST00000492601 DHFRP00374 187 aa13.04□□□□□ -0.32
SGMS1-204ENST00000492601 DEFA4P12838 97 aa13.04□□□□□ -0.32
SGMS1-204ENST00000492601 FOLR2P14207 255 aa13.04□□□□□ -0.32
SGMS1-204ENST00000492601 RPA2P15927 270 aa13.04□□□□□ -0.32
SGMS1-204ENST00000492601 CTRB1P17538 263 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms