RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 KCTD12Q96CX2 325 aaKnown RBP6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 FANCD2OSQ96PS1 177 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 OR2A7Q96R45 310 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 ZC4H2Q9NQZ6 224 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 SSR3Q9UNL2 185 aa6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 MRPS7Q9Y2R9 242 aaKnown RBP6.34□□□□□ -1.39
SMARCB1-207ENST00000491967 PRH1P02810 166 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 CLEC2LP0C7M8 214 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 CTRB1P17538 263 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 PSMB9P28065 219 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 KIR2DS2P43631 304 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 GNG2P59768 71 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 DEFB114Q30KQ6 69 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 C15orf32Q32M92 178 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 CTRB2Q6GPI1 263 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 SGPP2Q8IWX5 399 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 VKORC1L1Q8N0U8 176 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 BEST4Q8NFU0 473 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 OR4S2Q8NH73 311 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 OR4A5Q8NH83 315 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 GIMAP1Q8WWP7 306 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 ACOT12Q8WYK0 555 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 CCDC140Q96MF4 163 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 PHB2Q99623 299 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 RSRP1Q9BUV0 290 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 AUNIPQ9H7T9 357 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 BET1LQ9NYM9 111 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 PEMTQ9UBM1 199 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 ANAPC10Q9UM13 185 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 CSMD3Q7Z407 3707 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 BIRC6Q9NR09 4857 aa6.33□□□□□ -1.4
SMARCB1-207ENST00000491967 IGLV11-55A0A075B6I3 123 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 TRAV18A0A075B6X5 111 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 HMX3A6NHT5 357 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 GGCTO75223 188 aaKnown RBP6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 ACTL6BO94805 426 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 HRASP01112 189 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 PPYP01298 95 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 LYL1P12980 280 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 PSMB6P28072 239 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 FCGR2CP31995 323 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 RPL8P62917 257 aaKnown RBP6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 EXOSC2Q13868 293 aaKnown RBP6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 CD300EQ496F6 205 aaPredicted RBP6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 KCTD21Q4G0X4 260 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 LCE2DQ5TA82 110 aaPredicted RBP6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 DHRS11Q6UWP2 260 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 GVQW1Q8N7I0 195 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 FYTTD1Q96QD9 318 aaKnown RBP6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 SPATA25Q9BR10 227 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 SRSF8Q9BRL6 282 aaKnown RBP6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 AIFM2Q9BRQ8 373 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 DCUN1D5Q9BTE7 237 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 Q9H521 79 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 RNF167Q9H6Y7 350 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 CCL28Q9NRJ3 127 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 TECRQ9NZ01 308 aaKnown RBP6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 SPATA2Q9UM82 520 aa6.32□□□□□ -1.4
SMARCB1-207ENST00000491967 LCE6AA0A183 80 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 C2orf70A6NJV1 201 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 A8MWP6 167 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 J3QRK9 145 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 MPPED1O15442 326 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 XRCC3O43542 346 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 OR2J3O76001 311 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 NDUFB8O95169 186 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 C8orf88P0DMB2 117 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 AREGP15514 252 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 HLA-GP17693 338 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 NAT1P18440 290 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 RPL27AP46776 148 aaKnown RBP6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 TAS2R31P59538 309 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 OR2B8PP59922 312 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 TIMM50Q3ZCQ8 353 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 OR4A47Q6IF82 309 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 GTSCR1Q86UQ5 136 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 OR5AP2Q8NGF4 316 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 OR13F1Q8NGS4 319 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 TCTEX1D2Q8WW35 142 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 GPHA2Q96T91 129 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 PLEKHA2Q9HB19 425 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 TAS2R8Q9NYW2 309 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 FBXL7Q9UJT9 491 aa6.31□□□□□ -1.4
SMARCB1-207ENST00000491967 RYR2Q92736 4967 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 TRBV7-1A0A0A6YYK4 115 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 IGLC7A0M8Q6 106 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 TMEM213A2RRL7 107 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 RBMY1BA6NDE4 496 aaKnown RBP6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 RBMY1EA6NEQ0 496 aaKnown RBP6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 PPP5D1E7EU14 171 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 UPK2O00526 184 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 OR2C1O95371 312 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 DHFRP00374 187 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 HPRT1P00492 218 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 RBMY1DP0C7P1 496 aaKnown RBP6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 PTHLHP12272 177 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 FOLR2P14207 255 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 HIST1H1BP16401 226 aaKnown RBP6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 CBLN1P23435 193 aa6.3□□□□□ -1.4
SMARCB1-207ENST00000491967 GNRHRP30968 328 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms