RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 LOC102723971A0A1B0GUV8 181 aa8.8□□□□□ -1
USP4-214ENST00000491791 C15orf61A6NNL5 157 aa8.8□□□□□ -1
USP4-214ENST00000491791 INS-IGF2F8WCM5 200 aa8.8□□□□□ -1
USP4-214ENST00000491791 TSPAN4O14817 238 aa8.8□□□□□ -1
USP4-214ENST00000491791 GPR37O15354 613 aa8.8□□□□□ -1
USP4-214ENST00000491791 FCN3O75636 299 aa8.8□□□□□ -1
USP4-214ENST00000491791 FOLR2P14207 255 aa8.8□□□□□ -1
USP4-214ENST00000491791 PPT1P50897 306 aa8.8□□□□□ -1
USP4-214ENST00000491791 DLX6P56179 175 aa8.8□□□□□ -1
USP4-214ENST00000491791 LINC00205P59089 165 aa8.8□□□□□ -1
USP4-214ENST00000491791 HSPE1P61604 102 aaKnown RBP8.8□□□□□ -1
USP4-214ENST00000491791 ICAM4Q14773 271 aa8.8□□□□□ -1
USP4-214ENST00000491791 HFEQ30201 348 aa8.8□□□□□ -1
USP4-214ENST00000491791 PRAMEF5Q5TYX0 476 aa8.8□□□□□ -1
USP4-214ENST00000491791 SLC25A24Q6NUK1 477 aa8.8□□□□□ -1
USP4-214ENST00000491791 ADAM5Q6NVV9 412 aa8.8□□□□□ -1
USP4-214ENST00000491791 TGIF2LYQ8IUE0 185 aa8.8□□□□□ -1
USP4-214ENST00000491791 DEFB108BQ8NET1 73 aa8.8□□□□□ -1
USP4-214ENST00000491791 SFT2D1Q8WV19 159 aa8.8□□□□□ -1
USP4-214ENST00000491791 RAB39BQ96DA2 213 aa8.8□□□□□ -1
USP4-214ENST00000491791 PLPPR2Q96GM1 343 aa8.8□□□□□ -1
USP4-214ENST00000491791 RCC1LQ96I51 464 aaKnown RBP8.8□□□□□ -1
USP4-214ENST00000491791 P2RX4Q99571 388 aa8.8□□□□□ -1
USP4-214ENST00000491791 RSG1Q9BU20 258 aa8.8□□□□□ -1
USP4-214ENST00000491791 SMCO4Q9NRQ5 59 aa8.8□□□□□ -1
USP4-214ENST00000491791 TMEM140Q9NV12 185 aa8.8□□□□□ -1
USP4-214ENST00000491791 DCAF16Q9NXF7 216 aa8.8□□□□□ -1
USP4-214ENST00000491791 WDR83OSQ9Y284 106 aa8.8□□□□□ -1
USP4-214ENST00000491791 FBXO7Q9Y3I1 522 aa8.8□□□□□ -1
USP4-214ENST00000491791 KLF2Q9Y5W3 355 aaPredicted RBP8.8□□□□□ -1
USP4-214ENST00000491791 CSMD1Q96PZ7 3565 aa8.8□□□□□ -1
USP4-214ENST00000491791 RAI1Q7Z5J4 1906 aaPredicted RBP8.8□□□□□ -1
USP4-214ENST00000491791 CEBPZOSA8MTT3 80 aa8.79□□□□□ -1
USP4-214ENST00000491791 TMPRSS2O15393 492 aa8.79□□□□□ -1
USP4-214ENST00000491791 NDUFB3O43676 98 aa8.79□□□□□ -1
USP4-214ENST00000491791 CT45A6P0DMU7 189 aa8.79□□□□□ -1
USP4-214ENST00000491791 CT45A5P0DMU8 189 aa8.79□□□□□ -1
USP4-214ENST00000491791 CT45A7P0DMV0 189 aa8.79□□□□□ -1
USP4-214ENST00000491791 LOXP28300 417 aaPredicted RBP8.79□□□□□ -1
USP4-214ENST00000491791 RIPPLY3P57055 190 aa8.79□□□□□ -1
USP4-214ENST00000491791 RPL31P62899 125 aaKnown RBP8.79□□□□□ -1
USP4-214ENST00000491791 DLK1P80370 383 aa8.79□□□□□ -1
USP4-214ENST00000491791 ZNF726P1Q15940 193 aa8.79□□□□□ -1
USP4-214ENST00000491791 LTC4SQ16873 150 aa8.79□□□□□ -1
USP4-214ENST00000491791 LRRC10Q5BKY1 277 aa8.79□□□□□ -1
USP4-214ENST00000491791 TMEM200BQ69YZ2 307 aa8.79□□□□□ -1
USP4-214ENST00000491791 Q8N7P7 452 aa8.79□□□□□ -1
USP4-214ENST00000491791 C15orf54Q8N8G6 183 aa8.79□□□□□ -1
USP4-214ENST00000491791 OR5AN1Q8NGI8 311 aa8.79□□□□□ -1
USP4-214ENST00000491791 ZNF714Q96N38 554 aa8.79□□□□□ -1
USP4-214ENST00000491791 PCGF1Q9BSM1 259 aa8.79□□□□□ -1
USP4-214ENST00000491791 BET1LQ9NYM9 111 aa8.79□□□□□ -1
USP4-214ENST00000491791 PRNDQ9UKY0 176 aa8.79□□□□□ -1
USP4-214ENST00000491791 TCF19Q9Y242 345 aa8.79□□□□□ -1
USP4-214ENST00000491791 OTOGQ6ZRI0 2925 aa8.78□□□□□ -1
USP4-214ENST00000491791 C2CD3Q4AC94 2353 aa8.78□□□□□ -1
USP4-214ENST00000491791 A0A087WWC5 75 aa8.78□□□□□ -1
USP4-214ENST00000491791 CTXND1A0A1B0GTU2 59 aa8.78□□□□□ -1
USP4-214ENST00000491791 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.78□□□□□ -1
USP4-214ENST00000491791 COLCA2A8K830 154 aa8.78□□□□□ -1
USP4-214ENST00000491791 SEC14L6B5MCN3 397 aa8.78□□□□□ -1
USP4-214ENST00000491791 H7C2Y5 167 aa8.78□□□□□ -1
USP4-214ENST00000491791 UPK2O00526 184 aa8.78□□□□□ -1
USP4-214ENST00000491791 MMP23AO75900 390 aa8.78□□□□□ -1
USP4-214ENST00000491791 RBP4P02753 201 aa8.78□□□□□ -1
USP4-214ENST00000491791 PPOXP50336 477 aa8.78□□□□□ -1
USP4-214ENST00000491791 FLI1Q01543 452 aaPredicted RBP8.78□□□□□ -1
USP4-214ENST00000491791 RTL8BQ17RB0 113 aa8.78□□□□□ -1
USP4-214ENST00000491791 RNF212Q495C1 297 aa8.78□□□□□ -1
USP4-214ENST00000491791 TMEM155Q4W5P6 130 aa8.78□□□□□ -1
USP4-214ENST00000491791 TMEM177Q53S58 311 aa8.78□□□□□ -1
USP4-214ENST00000491791 SOHLH1Q5JUK2 328 aa8.78□□□□□ -1
USP4-214ENST00000491791 UTF1Q5T230 341 aa8.78□□□□□ -1
USP4-214ENST00000491791 OR4A47Q6IF82 309 aa8.78□□□□□ -1
USP4-214ENST00000491791 LYG1Q8N1E2 194 aa8.78□□□□□ -1
USP4-214ENST00000491791 RPP25LQ8N5L8 163 aaKnown RBP8.78□□□□□ -1
USP4-214ENST00000491791 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.78□□□□□ -1
USP4-214ENST00000491791 OSR1Q8TAX0 266 aaPredicted RBP8.78□□□□□ -1
USP4-214ENST00000491791 RAB1CQ92928 201 aa8.78□□□□□ -1
USP4-214ENST00000491791 TNFRSF14Q92956 283 aa8.78□□□□□ -1
USP4-214ENST00000491791 ZDHHC16Q969W1 377 aa8.78□□□□□ -1
USP4-214ENST00000491791 ST6GALNAC6Q969X2 333 aa8.78□□□□□ -1
USP4-214ENST00000491791 TMEM186Q96B77 213 aa8.78□□□□□ -1
USP4-214ENST00000491791 RHOVQ96L33 236 aa8.78□□□□□ -1
USP4-214ENST00000491791 CLCC1Q96S66 551 aa8.78□□□□□ -1
USP4-214ENST00000491791 RARRES2Q99969 163 aa8.78□□□□□ -1
USP4-214ENST00000491791 NPCDR1Q9BY65 106 aa8.78□□□□□ -1
USP4-214ENST00000491791 FKBP11Q9NYL4 201 aa8.78□□□□□ -1
USP4-214ENST00000491791 SH3BGRL2Q9UJC5 107 aa8.78□□□□□ -1
USP4-214ENST00000491791 PLCE1Q9P212 2302 aa8.78□□□□□ -1
USP4-214ENST00000491791 IGHV1-69-2A0A0G2JMI3 117 aa8.77□□□□□ -1.01
USP4-214ENST00000491791 C7orf77A4D0Y5 90 aa8.77□□□□□ -1.01
USP4-214ENST00000491791 C17orf112F2Z3M2 114 aa8.77□□□□□ -1.01
USP4-214ENST00000491791 F12P00748 615 aaPredicted RBP8.77□□□□□ -1.01
USP4-214ENST00000491791 IFNA1P01562 189 aa8.77□□□□□ -1.01
USP4-214ENST00000491791 IFNA17P01571 189 aa8.77□□□□□ -1.01
USP4-214ENST00000491791 BCL2P10415 239 aa8.77□□□□□ -1.01
USP4-214ENST00000491791 COX6B1P14854 86 aa8.77□□□□□ -1.01
USP4-214ENST00000491791 NDUFB7P17568 137 aa8.77□□□□□ -1.01
USP4-214ENST00000491791 CD1BP29016 333 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms