RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SERPINA7P05543 415 aa1.21□□□□□ -2.22
CD46-216ENST00000490278 TPM3P06753 285 aa1.21□□□□□ -2.22
CD46-216ENST00000490278 LGALS1P09382 135 aaKnown RBP1.21□□□□□ -2.22
CD46-216ENST00000490278 OCM2P0CE71 109 aa1.21□□□□□ -2.22
CD46-216ENST00000490278 RPL12P30050 165 aaKnown RBP1.21□□□□□ -2.22
CD46-216ENST00000490278 RPL30P62888 115 aaKnown RBP1.21□□□□□ -2.22
CD46-216ENST00000490278 COMMD7Q86VX2 200 aa1.21□□□□□ -2.22
CD46-216ENST00000490278 SLC22A24Q8N4F4 322 aa1.21□□□□□ -2.22
CD46-216ENST00000490278 TMEM156Q8N614 296 aa1.21□□□□□ -2.22
CD46-216ENST00000490278 SGMS2Q8NHU3 365 aa1.21□□□□□ -2.22
CD46-216ENST00000490278 LLPHQ9BRT6 129 aaKnown RBP1.21□□□□□ -2.22
CD46-216ENST00000490278 OR51I2Q9H344 312 aa1.21□□□□□ -2.22
CD46-216ENST00000490278 CXorf21Q9HAI6 301 aa1.21□□□□□ -2.22
CD46-216ENST00000490278 GPR84Q9NQS5 396 aa1.21□□□□□ -2.22
CD46-216ENST00000490278 COQ4Q9Y3A0 265 aa1.21□□□□□ -2.22
CD46-216ENST00000490278 ATP6V1DQ9Y5K8 247 aa1.21□□□□□ -2.22
CD46-216ENST00000490278 SIPA1L1O43166 1804 aa1.2□□□□□ -2.22
CD46-216ENST00000490278 TRAV7A0A075B6U4 112 aa1.2□□□□□ -2.22
CD46-216ENST00000490278 TRAV38-1A0A0B4J264 116 aa1.2□□□□□ -2.22
CD46-216ENST00000490278 HMSDA8MTL9 139 aa1.2□□□□□ -2.22
CD46-216ENST00000490278 H7C2G1 150 aa1.2□□□□□ -2.22
CD46-216ENST00000490278 M0QZ92 97 aa1.2□□□□□ -2.22
CD46-216ENST00000490278 ARL14EPLP0DKL9 152 aa1.2□□□□□ -2.22
CD46-216ENST00000490278 RPL28P46779 137 aaKnown RBP1.2□□□□□ -2.22
CD46-216ENST00000490278 RAB14P61106 215 aa1.2□□□□□ -2.22
CD46-216ENST00000490278 TPM4P67936 248 aa1.2□□□□□ -2.22
CD46-216ENST00000490278 RSU1Q15404 277 aa1.2□□□□□ -2.22
CD46-216ENST00000490278 KIAA2026Q5HYC2 2103 aa1.2□□□□□ -2.22
CD46-216ENST00000490278 LRRN1Q6UXK5 716 aa1.2□□□□□ -2.22
CD46-216ENST00000490278 PIGXQ8TBF5 258 aa1.2□□□□□ -2.22
CD46-216ENST00000490278 XAGE1AQ9HD64 81 aa1.2□□□□□ -2.22
CD46-216ENST00000490278 AK3Q9UIJ7 227 aa1.2□□□□□ -2.22
CD46-216ENST00000490278 IGHV1-69-2A0A0G2JMI3 117 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 OR4C45A6NMZ5 311 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 CXCR6O00574 342 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 PLA2G10O15496 165 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 ANGP03950 147 aaKnown RBP1.19□□□□□ -2.22
CD46-216ENST00000490278 TFPTP0C1Z6 253 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 DEFA4P12838 97 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 GPX2P18283 190 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 CCL1P22362 96 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 HAAOP46952 286 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 HIST1H4AP62805 103 aaKnown RBP1.19□□□□□ -2.22
CD46-216ENST00000490278 BATFQ16520 125 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 ACSM3Q53FZ2 586 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 TNFAIP8L3Q5GJ75 292 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 C9orf64Q5T6V5 341 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 SLC36A1Q7Z2H8 476 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 TBC1D19Q8N5T2 526 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 CST9LQ9H4G1 147 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 FGFR1OP2Q9NVK5 253 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 USE1Q9NZ43 259 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 NAT8Q9UHE5 227 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 C3orf18Q9UK00 162 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 PXMP4Q9Y6I8 212 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 FLT4P35916 1363 aa1.19□□□□□ -2.22
CD46-216ENST00000490278 F8W036 122 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 H0Y980 276 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 LST1O00453 97 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 SLC16A4O15374 487 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 CIAO1O76071 339 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 DEXIO95424 95 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 NSA2O95478 260 aaKnown RBP1.18□□□□□ -2.22
CD46-216ENST00000490278 CCL5P13501 91 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 MYL12AP19105 171 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 MSNP26038 577 aaKnown RBP1.18□□□□□ -2.22
CD46-216ENST00000490278 AKR1C3P42330 323 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 MAGEA2P43356 314 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 AQP4P55087 323 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 POLR2GP62487 172 aaKnown RBP eCLIP1.18□□□□□ -2.22
CD46-216ENST00000490278 TNFAIP6P98066 277 aaPredicted RBP1.18□□□□□ -2.22
CD46-216ENST00000490278 FABP9Q0Z7S8 132 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 OGFRL1Q5TC84 451 aaPredicted RBP1.18□□□□□ -2.22
CD46-216ENST00000490278 C1orf195Q5TG92 126 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 SSX8Q7RTT4 187 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 RPP25LQ8N5L8 163 aaKnown RBP1.18□□□□□ -2.22
CD46-216ENST00000490278 Q96M85 177 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 HSPB9Q9BQS6 159 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 CHST6Q9GZX3 395 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 CYSTM1Q9H1C7 97 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 NKIRAS1Q9NYS0 192 aa1.18□□□□□ -2.22
CD46-216ENST00000490278 RP1L1Q8IWN7 2480 aaPredicted RBP1.18□□□□□ -2.22
CD46-216ENST00000490278 A0A0D9SEW6 157 aa1.17□□□□□ -2.22
CD46-216ENST00000490278 TRBV6-5A0A0K0K1A5 114 aa1.17□□□□□ -2.22
CD46-216ENST00000490278 LRRN3E7EW58 273 aa1.17□□□□□ -2.22
CD46-216ENST00000490278 LEPROTO15243 131 aa1.17□□□□□ -2.22
CD46-216ENST00000490278 PPBPP02775 128 aa1.17□□□□□ -2.22
CD46-216ENST00000490278 MSMBP08118 114 aa1.17□□□□□ -2.22
CD46-216ENST00000490278 CSN1S1P47710 185 aa1.17□□□□□ -2.22
CD46-216ENST00000490278 REG1BP48304 166 aa1.17□□□□□ -2.22
CD46-216ENST00000490278 RAB13P51153 203 aa1.17□□□□□ -2.22
CD46-216ENST00000490278 CLVS2Q5SYC1 327 aa1.17□□□□□ -2.22
CD46-216ENST00000490278 ZNF550Q7Z398 422 aa1.17□□□□□ -2.22
CD46-216ENST00000490278 DYNAPQ8N1N2 210 aa1.17□□□□□ -2.22
CD46-216ENST00000490278 TMEM86AQ8N2M4 240 aa1.17□□□□□ -2.22
CD46-216ENST00000490278 ACOT12Q8WYK0 555 aa1.17□□□□□ -2.22
CD46-216ENST00000490278 RAB8BQ92930 207 aa1.17□□□□□ -2.22
CD46-216ENST00000490278 DIRAS2Q96HU8 199 aa1.17□□□□□ -2.22
CD46-216ENST00000490278 TIMM22Q9Y584 194 aa1.17□□□□□ -2.22
CD46-216ENST00000490278 C21orf140B9A014 251 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms