RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 CT55Q8WUE5 264 aa3.68□□□□□ -1.82
TM9SF3-206ENST00000490192 MND1Q9BWT6 205 aa3.68□□□□□ -1.82
TM9SF3-206ENST00000490192 COMMD5Q9GZQ3 224 aa3.68□□□□□ -1.82
TM9SF3-206ENST00000490192 SMDT1Q9H4I9 107 aa3.68□□□□□ -1.82
TM9SF3-206ENST00000490192 R4GN34 69 aa3.68□□□□□ -1.82
TM9SF3-206ENST00000490192 COL18A1P39060 1754 aa3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 TRBV20OR9-2A0A075B6H5 130 aa3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 SOD1P00441 154 aa3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 ZNF705DP0CH99 300 aaPredicted RBP3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 ZNF22P17026 224 aaPredicted RBP3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 RAB14P61106 215 aa3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 HTR4Q13639 388 aa3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 ARHGAP11BQ3KRB8 267 aa3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 FAM229BQ4G0N7 80 aa3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 SMARCD3Q6STE5 483 aa3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 ZNF322Q6U7Q0 402 aaPredicted RBP3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 Q6ZS49 121 aa3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 OR10P1Q8NGE3 313 aa3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 WDR61Q9GZS3 305 aaKnown RBP3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 TRABDQ9H4I3 376 aa3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 CISHQ9NSE2 258 aa3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 ASF1BQ9NVP2 202 aa3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 PAQR5Q9NXK6 330 aaPredicted RBP3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 ATG2BQ96BY7 2078 aa3.67□□□□□ -1.82
TM9SF3-206ENST00000490192 IGHV3-73A0A0B4J1V6 119 aa3.66□□□□□ -1.82
TM9SF3-206ENST00000490192 A0A1W2PQ67 120 aa3.66□□□□□ -1.82
TM9SF3-206ENST00000490192 H0YJX3 145 aa3.66□□□□□ -1.82
TM9SF3-206ENST00000490192 NDUFB2O95178 105 aa3.66□□□□□ -1.82
TM9SF3-206ENST00000490192 RPL27AP46776 148 aaKnown RBP3.66□□□□□ -1.82
TM9SF3-206ENST00000490192 RAB13P51153 203 aa3.66□□□□□ -1.82
TM9SF3-206ENST00000490192 RPL30P62888 115 aaKnown RBP3.66□□□□□ -1.82
TM9SF3-206ENST00000490192 EIF4EBP2Q13542 120 aaPredicted RBP3.66□□□□□ -1.82
TM9SF3-206ENST00000490192 CST6Q15828 149 aa3.66□□□□□ -1.82
TM9SF3-206ENST00000490192 LY6EQ16553 131 aa3.66□□□□□ -1.82
TM9SF3-206ENST00000490192 TRIQKQ629K1 86 aa3.66□□□□□ -1.82
TM9SF3-206ENST00000490192 AMMECR1LQ6DCA0 310 aa3.66□□□□□ -1.82
TM9SF3-206ENST00000490192 TBC1D19Q8N5T2 526 aa3.66□□□□□ -1.82
TM9SF3-206ENST00000490192 ZNF283Q8N7M2 679 aa3.66□□□□□ -1.82
TM9SF3-206ENST00000490192 GDPD1Q8N9F7 314 aa3.66□□□□□ -1.82
TM9SF3-206ENST00000490192 OR13C8Q8NGS7 320 aa3.66□□□□□ -1.82
TM9SF3-206ENST00000490192 ABCG5Q9H222 651 aa3.66□□□□□ -1.82
TM9SF3-206ENST00000490192 NUP155O75694 1391 aa3.65□□□□□ -1.82
TM9SF3-206ENST00000490192 ABCC12Q96J65 1359 aa3.65□□□□□ -1.82
TM9SF3-206ENST00000490192 PRR14LQ5THK1 2151 aa3.65□□□□□ -1.82
TM9SF3-206ENST00000490192 KIF26AQ9ULI4 1882 aaPredicted RBP3.65□□□□□ -1.82
TM9SF3-206ENST00000490192 TMEM269A0A1B0GVZ9 245 aa3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 EXOC1LA0A1B0GW35 172 aa3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 A0A1B0GW54 56 aa3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 C17orf51A8MQB3 221 aa3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 C17orf98A8MV24 154 aa3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 I3L521 148 aa3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 SERPINE1P05121 402 aa3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 SRP19P09132 144 aaKnown RBP3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 LPAR6P43657 344 aa3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 ZNF141Q15928 474 aa3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 C12orf74Q32Q52 190 aa3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 C9orf64Q5T6V5 341 aa3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 SSX8Q7RTT4 187 aa3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 CNEP1R1Q8N9A8 125 aa3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 RSPO3Q9BXY4 272 aaPredicted RBP3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 TMEM222Q9H0R3 208 aa3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 FBXL12Q9NXK8 326 aa3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 MCTS1Q9ULC4 181 aaKnown RBP3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 UTP11Q9Y3A2 253 aaKnown RBP3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 TMEM56-RWDD3S4R434 201 aa3.65□□□□□ -1.83
TM9SF3-206ENST00000490192 ROBO3Q96MS0 1386 aa3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 GRIFINA4D1Z8 144 aa3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 PIRO00625 290 aa3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 ATG12O94817 140 aa3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 CPSF4O95639 269 aaKnown RBP3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 IFNA1P01562 189 aa3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 IGHV1-69P01742 117 aa3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 KRTAP5-9P26371 169 aa3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 CRYBA4P53673 196 aa3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 TAS2R41P59536 307 aa3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 TAS2R30P59541 319 aa3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 WDR59Q6PJI9 974 aa3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 TMPPEQ6ZT21 453 aa3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 MRPL30Q8TCC3 161 aaKnown RBP3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 ACOT12Q8WYK0 555 aa3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 OR8B2Q96RD0 313 aa3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 KLF6Q99612 283 aaPredicted RBP3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 TTTY13Q9BZ97 58 aa3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 C11orf68Q9H3H3 251 aaKnown RBP3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 CENPHQ9H3R5 247 aa3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 MARCOQ9UEW3 520 aaPredicted RBP3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 HEY1Q9Y5J3 304 aa3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 DOCK5Q9H7D0 1870 aa3.64□□□□□ -1.83
TM9SF3-206ENST00000490192 OR5K4A6NMS3 321 aa3.63□□□□□ -1.83
TM9SF3-206ENST00000490192 CIAO1O76071 339 aa3.63□□□□□ -1.83
TM9SF3-206ENST00000490192 ZNF14P17017 642 aaPredicted RBP3.63□□□□□ -1.83
TM9SF3-206ENST00000490192 S100A7P31151 101 aa3.63□□□□□ -1.83
TM9SF3-206ENST00000490192 RBM11P57052 281 aaKnown RBP3.63□□□□□ -1.83
TM9SF3-206ENST00000490192 TAS2R20P59543 309 aa3.63□□□□□ -1.83
TM9SF3-206ENST00000490192 ZNF117Q03924 483 aa3.63□□□□□ -1.83
TM9SF3-206ENST00000490192 KRTAP13-2Q52LG2 175 aa3.63□□□□□ -1.83
TM9SF3-206ENST00000490192 GNPDA2Q8TDQ7 276 aa3.63□□□□□ -1.83
TM9SF3-206ENST00000490192 EFCAB1Q9HAE3 211 aa3.63□□□□□ -1.83
TM9SF3-206ENST00000490192 CACNA1SQ13698 1873 aa3.62□□□□□ -1.83
TM9SF3-206ENST00000490192 SPATA31E1Q6ZUB1 1445 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms