RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 P2RX4Q99571 388 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 GPA33Q99795 319 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 TXNDC17Q9BRA2 123 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 TMEM208Q9BTX3 173 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 SUCNR1Q9BXA5 334 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 SAMD10Q9BYL1 202 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 KRTAP4-1Q9BYQ7 146 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 NMES1Q9C002 83 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 RAB33BQ9H082 229 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 SLC25A31Q9H0C2 315 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 GABARAPL1Q9H0R8 117 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 OR52D1Q9H346 318 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 WDR55Q9H6Y2 383 aaPredicted RBP1.54□□□□□ -2.16
HMGN1-218ENST00000490032 AUNIPQ9H7T9 357 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 PLEKHA1Q9HB21 404 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 ZNF160Q9HCG1 818 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 NDUFB11Q9NX14 153 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 FKBP11Q9NYL4 201 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 CKLFQ9UBR5 152 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 CYSLTR1Q9Y271 337 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 SLC35A3Q9Y2D2 325 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 NOP16Q9Y3C1 178 aaKnown RBP1.54□□□□□ -2.16
HMGN1-218ENST00000490032 OR10H1Q9Y4A9 318 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 OR51B2Q9Y5P1 312 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 NPTNQ9Y639 398 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 SSC5DA1L4H1 1573 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 DOCK2Q92608 1830 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 MYO5AQ9Y4I1 1855 aaKnown RBP1.54□□□□□ -2.16
HMGN1-218ENST00000490032 CACNA1AO00555 2505 aa1.54□□□□□ -2.16
HMGN1-218ENST00000490032 A0A087WUJ7 227 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 TRBV9A0A0B4J1U6 114 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 A0A0B4J2A0 478 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 CCL15-CCL14A0A0B4J2E2 113 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 ANKRD20A5PA0PJZ0 165 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 TSPAN11A1L157 253 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 TMEM213A2RRL7 107 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 C7orf71A4D174 169 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 OR6C6A6NF89 314 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 C9J4A7 227 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 FTCDNL1E5RQL4 147 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 F8W1H4 67 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 H7C1C5 153 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 K7EQM0 130 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 M0R1X1 148 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 UPK1AO00322 258 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 NME4O00746 187 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 PLA2G10O15496 165 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 EEF1E1O43324 174 aaKnown RBP1.53□□□□□ -2.16
HMGN1-218ENST00000490032 CNMDO75829 334 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 NDUFB6O95139 128 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 UTS2O95399 124 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 CLDN9O95484 217 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 SNAI1O95863 264 aaPredicted RBP1.53□□□□□ -2.16
HMGN1-218ENST00000490032 HPRT1P00492 218 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 NRASP01111 189 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 HRASP01112 189 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 KRASP01116 189 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 IGHV2-5P01817 119 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 CD74P04233 296 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 ISG15P05161 165 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 HLA-DQB2P05538 268 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 BCHEP06276 602 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 CD3GP09693 182 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 OR4Q2P0C623 313 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 SFTA3P0C7M3 94 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 SEC11BP0C7V7 166 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 OR12D1P0DN82 309 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 ESDP10768 282 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 CD37P11049 281 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 ERGP11308 486 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 CD79AP11912 226 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 CCL2P13500 99 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 KCNE1P15382 129 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 ZNF7P17097 686 aaPredicted RBP1.53□□□□□ -2.16
HMGN1-218ENST00000490032 AKR1C4P17516 323 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 HLA-GP17693 338 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 PMCHP20382 165 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 IL12BP29460 328 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 ADORA1P30542 326 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 OR1E1P30953 314 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 CAPZBP47756 277 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 DNASE1L1P49184 302 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 CYB561P49447 251 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 GNG4P50150 75 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 SULT1A1P50225 295 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 FABP6P51161 128 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 EMP2P54851 167 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 CLDN12P56749 244 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 TAS2R30P59541 319 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 RPS15P62841 145 aaKnown RBP1.53□□□□□ -2.16
HMGN1-218ENST00000490032 DYNLT1P63172 113 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 LCN2P80188 198 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 IFITM3Q01628 133 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 IRF8Q02556 426 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 LOXL1Q08397 574 aaPredicted RBP1.53□□□□□ -2.16
HMGN1-218ENST00000490032 PRDX4Q13162 271 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 SRSF6Q13247 344 aaKnown RBP1.53□□□□□ -2.16
HMGN1-218ENST00000490032 SLAMF1Q13291 335 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 SSX1Q16384 188 aa1.53□□□□□ -2.16
HMGN1-218ENST00000490032 BATFQ16520 125 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms