RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 KBTBD11O94819 623 aa11.88□□□□□ -0.51
PLOD3-216ENST00000489927 NDUFB8O95169 186 aa11.88□□□□□ -0.51
PLOD3-216ENST00000489927 HLA-DQB1P01920 261 aa11.88□□□□□ -0.51
PLOD3-216ENST00000489927 CD36P16671 472 aa11.88□□□□□ -0.51
PLOD3-216ENST00000489927 NFYAP23511 347 aaPredicted RBP11.88□□□□□ -0.51
PLOD3-216ENST00000489927 DTYMKP23919 212 aa11.88□□□□□ -0.51
PLOD3-216ENST00000489927 ZNF57Q68EA5 555 aaPredicted RBP11.88□□□□□ -0.51
PLOD3-216ENST00000489927 OR52B4Q8NGK2 314 aa11.88□□□□□ -0.51
PLOD3-216ENST00000489927 FANCD2OSQ96PS1 177 aa11.88□□□□□ -0.51
PLOD3-216ENST00000489927 FYTTD1Q96QD9 318 aaKnown RBP11.88□□□□□ -0.51
PLOD3-216ENST00000489927 OR2A7Q96R45 310 aa11.88□□□□□ -0.51
PLOD3-216ENST00000489927 OVOL2Q9BRP0 275 aa11.88□□□□□ -0.51
PLOD3-216ENST00000489927 ST6GALNAC5Q9BVH7 336 aa11.88□□□□□ -0.51
PLOD3-216ENST00000489927 GGTLC1Q9BX51 225 aa11.88□□□□□ -0.51
PLOD3-216ENST00000489927 SLC2A9Q9NRM0 540 aa11.88□□□□□ -0.51
PLOD3-216ENST00000489927 IGKV1D-13A0A0B4J2D9 117 aa11.87□□□□□ -0.51
PLOD3-216ENST00000489927 A8MWP6 167 aa11.87□□□□□ -0.51
PLOD3-216ENST00000489927 SCAF4O95104 1147 aaKnown RBP11.87□□□□□ -0.51
PLOD3-216ENST00000489927 CRYGCP07315 174 aa11.87□□□□□ -0.51
PLOD3-216ENST00000489927 ZNF735P0CB33 412 aa11.87□□□□□ -0.51
PLOD3-216ENST00000489927 IGKV1-13P0DP09 117 aa11.87□□□□□ -0.51
PLOD3-216ENST00000489927 AREGP15514 252 aa11.87□□□□□ -0.51
PLOD3-216ENST00000489927 RPL27AP46776 148 aaKnown RBP11.87□□□□□ -0.51
PLOD3-216ENST00000489927 AQP4P55087 323 aa11.87□□□□□ -0.51
PLOD3-216ENST00000489927 BRWD1-AS2P59051 145 aa11.87□□□□□ -0.51
PLOD3-216ENST00000489927 SSX1Q16384 188 aa11.87□□□□□ -0.51
PLOD3-216ENST00000489927 PRSS48Q7RTY5 328 aa11.87□□□□□ -0.51
PLOD3-216ENST00000489927 PUSL1Q8N0Z8 303 aaKnown RBP11.87□□□□□ -0.51
PLOD3-216ENST00000489927 UXS1Q8NBZ7 420 aa11.87□□□□□ -0.51
PLOD3-216ENST00000489927 OR4S2Q8NH73 311 aa11.87□□□□□ -0.51
PLOD3-216ENST00000489927 VSTM2AQ8TAG5 236 aa11.87□□□□□ -0.51
PLOD3-216ENST00000489927 TMEM167AQ8TBQ9 72 aa11.87□□□□□ -0.51
PLOD3-216ENST00000489927 ATG5Q9H1Y0 275 aa11.87□□□□□ -0.51
PLOD3-216ENST00000489927 LOC102724200A0A096LPH7 203 aaPredicted RBP11.86□□□□□ -0.51
PLOD3-216ENST00000489927 SLC22A5O76082 557 aa11.86□□□□□ -0.51
PLOD3-216ENST00000489927 CTXN2P0C2S0 81 aa11.86□□□□□ -0.51
PLOD3-216ENST00000489927 CRHBPP24387 322 aa11.86□□□□□ -0.51
PLOD3-216ENST00000489927 PSMB6P28072 239 aa11.86□□□□□ -0.51
PLOD3-216ENST00000489927 EIF4EBP1Q13541 118 aaPredicted RBP11.86□□□□□ -0.51
PLOD3-216ENST00000489927 CDNFQ49AH0 187 aa11.86□□□□□ -0.51
PLOD3-216ENST00000489927 FAM106AQ4KMX7 169 aa11.86□□□□□ -0.51
PLOD3-216ENST00000489927 TCTEX1D2Q8WW35 142 aa11.86□□□□□ -0.51
PLOD3-216ENST00000489927 EEF1AKMT3Q96AZ1 226 aa11.86□□□□□ -0.51
PLOD3-216ENST00000489927 SPATA2Q9UM82 520 aa11.86□□□□□ -0.51
PLOD3-216ENST00000489927 LY6G6CO95867 125 aa11.85□□□□□ -0.51
PLOD3-216ENST00000489927 DHFRP00374 187 aa11.85□□□□□ -0.51
PLOD3-216ENST00000489927 MYOD1P15172 320 aa11.85□□□□□ -0.51
PLOD3-216ENST00000489927 RAB3BP20337 219 aa11.85□□□□□ -0.51
PLOD3-216ENST00000489927 MYL9P24844 172 aa11.85□□□□□ -0.51
PLOD3-216ENST00000489927 MAS1LP35410 378 aa11.85□□□□□ -0.51
PLOD3-216ENST00000489927 PMS2P11Q13670 270 aa11.85□□□□□ -0.51
PLOD3-216ENST00000489927 ARL6IP1Q15041 203 aa11.85□□□□□ -0.51
PLOD3-216ENST00000489927 KLK9Q2XQG4 91 aa11.85□□□□□ -0.51
PLOD3-216ENST00000489927 TM4SF20Q53R12 229 aa11.85□□□□□ -0.51
PLOD3-216ENST00000489927 HACD4Q5VWC8 232 aa11.85□□□□□ -0.51
PLOD3-216ENST00000489927 BTNL8Q6UX41 500 aa11.85□□□□□ -0.51
PLOD3-216ENST00000489927 UNQ9165/PRO28630Q6UXU0 137 aa11.85□□□□□ -0.51
PLOD3-216ENST00000489927 NR2C2APQ86WQ0 139 aa11.85□□□□□ -0.51
PLOD3-216ENST00000489927 HSD17B10Q99714 261 aaKnown RBP11.85□□□□□ -0.51
PLOD3-216ENST00000489927 TAS2R8Q9NYW2 309 aa11.85□□□□□ -0.51
PLOD3-216ENST00000489927 KLK9Q9UKQ9 250 aa11.85□□□□□ -0.51
PLOD3-216ENST00000489927 CXorf65A6NEN9 183 aa11.84□□□□□ -0.51
PLOD3-216ENST00000489927 MFSD2BA6NFX1 497 aa11.84□□□□□ -0.51
PLOD3-216ENST00000489927 REG1AP05451 166 aa11.84□□□□□ -0.51
PLOD3-216ENST00000489927 CLEC3BP05452 202 aa11.84□□□□□ -0.51
PLOD3-216ENST00000489927 CTRB1P17538 263 aa11.84□□□□□ -0.51
PLOD3-216ENST00000489927 EWSR1Q01844 656 aaKnown RBP eCLIP11.84□□□□□ -0.51
PLOD3-216ENST00000489927 ANKRD55Q3KP44 614 aa11.84□□□□□ -0.51
PLOD3-216ENST00000489927 CTRB2Q6GPI1 263 aa11.84□□□□□ -0.51
PLOD3-216ENST00000489927 OR4A47Q6IF82 309 aa11.84□□□□□ -0.51
PLOD3-216ENST00000489927 CNIH2Q6PI25 160 aa11.84□□□□□ -0.51
PLOD3-216ENST00000489927 SSX9Q7RTT3 188 aa11.84□□□□□ -0.51
PLOD3-216ENST00000489927 MFSD4AQ8N468 514 aa11.84□□□□□ -0.51
PLOD3-216ENST00000489927 NUDCD2Q8WVJ2 157 aa11.84□□□□□ -0.51
PLOD3-216ENST00000489927 NRG4Q8WWG1 115 aa11.84□□□□□ -0.51
PLOD3-216ENST00000489927 GPHA2Q96T91 129 aa11.84□□□□□ -0.51
PLOD3-216ENST00000489927 DCSTAMPQ9H295 470 aa11.84□□□□□ -0.51
PLOD3-216ENST00000489927 NDUFB11Q9NX14 153 aa11.84□□□□□ -0.51
PLOD3-216ENST00000489927 KMT2AQ03164 3969 aa11.84□□□□□ -0.51
PLOD3-216ENST00000489927 IGLV11-55A0A075B6I3 123 aa11.83□□□□□ -0.52
PLOD3-216ENST00000489927 A0A0J9YWU9 116 aa11.83□□□□□ -0.52
PLOD3-216ENST00000489927 SMIM30A4D0T7 59 aa11.83□□□□□ -0.52
PLOD3-216ENST00000489927 CGB1A6NKQ9 187 aa11.83□□□□□ -0.52
PLOD3-216ENST00000489927 DEFA4P12838 97 aa11.83□□□□□ -0.52
PLOD3-216ENST00000489927 HIST1H1BP16401 226 aaKnown RBP11.83□□□□□ -0.52
PLOD3-216ENST00000489927 RPL8P62917 257 aaKnown RBP11.83□□□□□ -0.52
PLOD3-216ENST00000489927 TBCEQ15813 527 aaPredicted RBP11.83□□□□□ -0.52
PLOD3-216ENST00000489927 ZNF367Q7RTV3 350 aa11.83□□□□□ -0.52
PLOD3-216ENST00000489927 TRBV7-1A0A0A6YYK4 115 aa11.82□□□□□ -0.52
PLOD3-216ENST00000489927 TRDV1A0A1B0GX56 115 aa11.82□□□□□ -0.52
PLOD3-216ENST00000489927 TMEM235A6NFC5 223 aa11.82□□□□□ -0.52
PLOD3-216ENST00000489927 HRASP01112 189 aa11.82□□□□□ -0.52
PLOD3-216ENST00000489927 C8orf88P0DMB2 117 aa11.82□□□□□ -0.52
PLOD3-216ENST00000489927 HLA-GP17693 338 aa11.82□□□□□ -0.52
PLOD3-216ENST00000489927 ZNF585BQ52M93 769 aa11.82□□□□□ -0.52
PLOD3-216ENST00000489927 C22orf42Q6IC83 251 aa11.82□□□□□ -0.52
PLOD3-216ENST00000489927 ZNF66Q6ZN08 573 aa11.82□□□□□ -0.52
PLOD3-216ENST00000489927 RBPMS2Q6ZRY4 209 aaKnown RBP11.82□□□□□ -0.52
PLOD3-216ENST00000489927 OR1L6Q8NGR2 347 aa11.82□□□□□ -0.52
PLOD3-216ENST00000489927 CXorf58Q96LI9 332 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms