RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 ANKRD29Q8N6D5 301 aa2.48□□□□□ -2.01
VPS26A-206ENST00000489794 OR8B12Q8NGG6 310 aa2.48□□□□□ -2.01
VPS26A-206ENST00000489794 MCFD2Q8NI22 146 aa2.48□□□□□ -2.01
VPS26A-206ENST00000489794 RNASE6Q93091 150 aaKnown RBP2.48□□□□□ -2.01
VPS26A-206ENST00000489794 IGF2BP2-AS1Q96M15 143 aa2.48□□□□□ -2.01
VPS26A-206ENST00000489794 C1QTNF6Q9BXI9 259 aa2.48□□□□□ -2.01
VPS26A-206ENST00000489794 PAQR5Q9NXK6 330 aaPredicted RBP2.48□□□□□ -2.01
VPS26A-206ENST00000489794 ANGPT4Q9Y264 503 aa2.48□□□□□ -2.01
VPS26A-206ENST00000489794 OTOFQ9HC10 1997 aa2.48□□□□□ -2.01
VPS26A-206ENST00000489794 PCNX2A6NKB5 2137 aa2.48□□□□□ -2.01
VPS26A-206ENST00000489794 TRAV26-2A0A0B4J265 109 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 hADV38S2A0JD32 116 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 A8MUN3 132 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 A8MWP6 167 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 C2orf74A8MZ97 194 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 HLA-DRB1P01911 266 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 CYBAP13498 195 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 CRYBB3P26998 211 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 ZNF140P52738 457 aaPredicted RBP2.47□□□□□ -2.01
VPS26A-206ENST00000489794 RPS20P60866 119 aaKnown RBP2.47□□□□□ -2.01
VPS26A-206ENST00000489794 HOXC5Q00444 222 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 GNA12Q03113 381 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 POU6F1Q14863 301 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 PYCR3Q53H96 274 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 SCXQ7RTU7 201 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 SLC36A1Q7Z2H8 476 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 LYZL2Q7Z4W2 148 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 SLC22A24Q8N4F4 322 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 EIF4E3Q8N5X7 224 aaKnown RBP2.47□□□□□ -2.01
VPS26A-206ENST00000489794 DAND5Q8N907 189 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 SGMS2Q8NHU3 365 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 RAD51AP1Q96B01 352 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 NMNAT3Q96T66 252 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 NIPSNAP1Q9BPW8 284 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 TMEM147Q9BVK8 224 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 RNASE7Q9H1E1 156 aaKnown RBP2.47□□□□□ -2.01
VPS26A-206ENST00000489794 CENPHQ9H3R5 247 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 TAAR3PQ9P1P4 343 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 SNX12Q9UMY4 172 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 PBRM1Q86U86 1689 aa2.47□□□□□ -2.01
VPS26A-206ENST00000489794 ZNF638Q14966 1978 aaKnown RBP2.47□□□□□ -2.01
VPS26A-206ENST00000489794 DSCAMO60469 2012 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 IGSF23A1L1A6 192 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 UBE2L6O14933 153 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 CIAO1O76071 339 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 KCNE1P15382 129 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 TSPEAR-AS2P59090 65 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 TAS2R41P59536 307 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 KRTAP12-3P60328 96 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 CAV1Q03135 178 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 GRK1Q15835 563 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 IAH1Q2TAA2 248 aaPredicted RBP2.46□□□□□ -2.02
VPS26A-206ENST00000489794 ARHGAP11BQ3KRB8 267 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 TNFAIP8L3Q5GJ75 292 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 TEX36Q5VZQ5 186 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 TRIQKQ629K1 86 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 RASL11AQ6T310 242 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 AKAP14Q86UN6 197 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 OOSP2Q86WS3 158 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 GPHB5Q86YW7 130 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 OR52L1Q8NGH7 329 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 ERMAPQ96PL5 475 aaPredicted RBP2.46□□□□□ -2.02
VPS26A-206ENST00000489794 NKX6-2Q9C056 277 aaPredicted RBP2.46□□□□□ -2.02
VPS26A-206ENST00000489794 PRTFDC1Q9NRG1 225 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 UQCC1Q9NVA1 299 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 RSL24D1Q9UHA3 163 aaKnown RBP2.46□□□□□ -2.02
VPS26A-206ENST00000489794 AK3Q9UIJ7 227 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 ZNF443Q9Y2A4 671 aaPredicted RBP2.46□□□□□ -2.02
VPS26A-206ENST00000489794 DICER1Q9UPY3 1922 aaKnown RBP2.46□□□□□ -2.02
VPS26A-206ENST00000489794 ADAMTSL1Q8N6G6 1762 aa2.46□□□□□ -2.02
VPS26A-206ENST00000489794 DOCK5Q9H7D0 1870 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 IGLV10-54A0A075B6I4 117 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 A0A0J9YY10 115 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 A0A1B0GX78 115 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 GGTLC3B5MD39 225 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 SLC17A3O00476 420 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 ATG12O94817 140 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 CRYZL1O95825 349 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 RPSAP08865 295 aaKnown RBP2.45□□□□□ -2.02
VPS26A-206ENST00000489794 SLC25A16P16260 332 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 TBPL1P62380 186 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 KRTAP25-1Q3LHN0 102 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 KRTAP6-3Q3LI67 103 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 AMTNQ6UX39 209 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 SDIM1Q6ZPB5 146 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 OR11H1Q8NG94 326 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 OR10A6Q8NH74 314 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 RPS4Y2Q8TD47 263 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 TSPAN32Q96QS1 320 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 MGLLQ99685 303 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 UPK3BQ9BT76 320 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 HIGD2AQ9BW72 106 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 C11orf1Q9H5F2 150 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 ANKRD30AQ9BXX3 1397 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 ATG2BQ96BY7 2078 aa2.45□□□□□ -2.02
VPS26A-206ENST00000489794 FBN1P35555 2871 aaKnown RBP2.44□□□□□ -2.02
VPS26A-206ENST00000489794 HECW1Q76N89 1606 aa2.44□□□□□ -2.02
VPS26A-206ENST00000489794 EXOC1LA0A1B0GW35 172 aa2.44□□□□□ -2.02
VPS26A-206ENST00000489794 C9JCJ5 164 aa2.44□□□□□ -2.02
VPS26A-206ENST00000489794 PLA2G10O15496 165 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms