RNA–Protein interactions for RNA: ENST00000489475.5

HOXB3-210, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-210ENST00000489475 Q5PR19 223 aa21.64■■□□□ 1.05
HOXB3-210ENST00000489475 PSENENQ9NZ42 101 aa21.64■■□□□ 1.05
HOXB3-210ENST00000489475 GCN1Q92616 2671 aaKnown RBP21.63■■□□□ 1.05
HOXB3-210ENST00000489475 CEBPZOSA8MTT3 80 aa21.63■■□□□ 1.05
HOXB3-210ENST00000489475 IL6RP08887 468 aaPredicted RBP21.63■■□□□ 1.05
HOXB3-210ENST00000489475 LGALS7P47929 136 aa21.63■■□□□ 1.05
HOXB3-210ENST00000489475 SPCS3P61009 180 aa21.63■■□□□ 1.05
HOXB3-210ENST00000489475 EWSR1Q01844 656 aaKnown RBP eCLIP21.63■■□□□ 1.05
HOXB3-210ENST00000489475 ZNF767PQ75MW2 155 aa21.63■■□□□ 1.05
HOXB3-210ENST00000489475 TMEM252Q8N6L7 170 aa21.63■■□□□ 1.05
HOXB3-210ENST00000489475 ZNF680Q8NEM1 530 aa21.63■■□□□ 1.05
HOXB3-210ENST00000489475 OR52E5Q8NH55 327 aa21.63■■□□□ 1.05
HOXB3-210ENST00000489475 VSTM2AQ8TAG5 236 aa21.63■■□□□ 1.05
HOXB3-210ENST00000489475 TMEM14BQ9NUH8 114 aa21.63■■□□□ 1.05
HOXB3-210ENST00000489475 NUP50Q9UKX7 468 aa21.63■■□□□ 1.05
HOXB3-210ENST00000489475 PRNDQ9UKY0 176 aa21.63■■□□□ 1.05
HOXB3-210ENST00000489475 FOXA2Q9Y261 457 aaPredicted RBP21.63■■□□□ 1.05
HOXB3-210ENST00000489475 IGSF23A1L1A6 192 aa21.62■■□□□ 1.05
HOXB3-210ENST00000489475 OOSP1A8MZH6 123 aa21.62■■□□□ 1.05
HOXB3-210ENST00000489475 UPK2O00526 184 aa21.62■■□□□ 1.05
HOXB3-210ENST00000489475 TIMM23O14925 209 aa21.62■■□□□ 1.05
HOXB3-210ENST00000489475 SPDEFO95238 335 aa21.62■■□□□ 1.05
HOXB3-210ENST00000489475 UBA52P62987 128 aaKnown RBP21.62■■□□□ 1.05
HOXB3-210ENST00000489475 CCDC144NLQ6NUI1 221 aa21.62■■□□□ 1.05
HOXB3-210ENST00000489475 PUSL1Q8N0Z8 303 aaKnown RBP21.62■■□□□ 1.05
HOXB3-210ENST00000489475 DTD1Q8TEA8 209 aa21.62■■□□□ 1.05
HOXB3-210ENST00000489475 CIB3Q96Q77 187 aaPredicted RBP21.62■■□□□ 1.05
HOXB3-210ENST00000489475 FBXL17Q9UF56 701 aa21.62■■□□□ 1.05
HOXB3-210ENST00000489475 TBL2Q9Y4P3 447 aaKnown RBP21.62■■□□□ 1.05
HOXB3-210ENST00000489475 MAP1AP78559 2803 aaPredicted RBP21.62■■□□□ 1.05
HOXB3-210ENST00000489475 H3BP45 60 aa21.62■■□□□ 1.05
HOXB3-210ENST00000489475 IFNA7P01567 189 aa21.62■■□□□ 1.05
HOXB3-210ENST00000489475 NHLH2Q02577 135 aa21.62■■□□□ 1.05
HOXB3-210ENST00000489475 CLEC9AQ6UXN8 241 aa21.62■■□□□ 1.05
HOXB3-210ENST00000489475 CSMD2Q7Z408 3487 aa21.61■■□□□ 1.05
HOXB3-210ENST00000489475 A0A096LNT2 108 aa21.61■■□□□ 1.05
HOXB3-210ENST00000489475 CFDP00746 253 aaPredicted RBP21.61■■□□□ 1.05
HOXB3-210ENST00000489475 SSX2Q16385 188 aa21.61■■□□□ 1.05
HOXB3-210ENST00000489475 VMA21Q3ZAQ7 101 aa21.61■■□□□ 1.05
HOXB3-210ENST00000489475 ZDHHC16Q969W1 377 aa21.61■■□□□ 1.05
HOXB3-210ENST00000489475 PAIP2BQ9ULR5 123 aaKnown RBP21.61■■□□□ 1.05
HOXB3-210ENST00000489475 KBTBD11O94819 623 aa21.6■■□□□ 1.05
HOXB3-210ENST00000489475 BAXQ07812 192 aa21.6■■□□□ 1.05
HOXB3-210ENST00000489475 PDLIM3Q53GG5 364 aaPredicted RBP21.6■■□□□ 1.05
HOXB3-210ENST00000489475 SPINK9Q5DT21 86 aa21.6■■□□□ 1.05
HOXB3-210ENST00000489475 C1orf159Q96HA4 380 aa21.6■■□□□ 1.05
HOXB3-210ENST00000489475 SMIM3Q9BZL3 60 aa21.6■■□□□ 1.05
HOXB3-210ENST00000489475 FKBP11Q9NYL4 201 aa21.6■■□□□ 1.05
HOXB3-210ENST00000489475 IGLV2-23P01705 113 aa21.59■■□□□ 1.05
HOXB3-210ENST00000489475 CD1BP29016 333 aa21.59■■□□□ 1.05
HOXB3-210ENST00000489475 LOXL1Q08397 574 aaPredicted RBP21.59■■□□□ 1.05
HOXB3-210ENST00000489475 PRSS57Q6UWY2 283 aa21.59■■□□□ 1.05
HOXB3-210ENST00000489475 STX12Q86Y82 276 aa21.59■■□□□ 1.05
HOXB3-210ENST00000489475 OR4A5Q8NH83 315 aa21.59■■□□□ 1.05
HOXB3-210ENST00000489475 ST8SIA2Q92186 375 aa21.59■■□□□ 1.05
HOXB3-210ENST00000489475 CLCC1Q96S66 551 aa21.59■■□□□ 1.05
HOXB3-210ENST00000489475 CYTL1Q9NRR1 136 aa21.59■■□□□ 1.05
HOXB3-210ENST00000489475 AUP1Q9Y679 476 aa21.59■■□□□ 1.05
HOXB3-210ENST00000489475 TRAV20A0A0B4J274 112 aa21.59■■□□□ 1.05
HOXB3-210ENST00000489475 LY86O95711 162 aa21.59■■□□□ 1.05
HOXB3-210ENST00000489475 HSPE1P61604 102 aaKnown RBP21.59■■□□□ 1.05
HOXB3-210ENST00000489475 EXOSC2Q13868 293 aaKnown RBP21.59■■□□□ 1.05
HOXB3-210ENST00000489475 SPANXN5Q5MJ07 72 aa21.59■■□□□ 1.05
HOXB3-210ENST00000489475 RITA1Q96K30 269 aa21.59■■□□□ 1.05
HOXB3-210ENST00000489475 TCF19Q9Y242 345 aa21.59■■□□□ 1.05
HOXB3-210ENST00000489475 OR51B2Q9Y5P1 312 aa21.59■■□□□ 1.05
HOXB3-210ENST00000489475 CST7O76096 145 aa21.58■■□□□ 1.05
HOXB3-210ENST00000489475 LINC01356Q8N9X3 169 aa21.58■■□□□ 1.05
HOXB3-210ENST00000489475 MALSU1Q96EH3 234 aa21.58■■□□□ 1.05
HOXB3-210ENST00000489475 BSCL2Q96G97 398 aaPredicted RBP21.58■■□□□ 1.05
HOXB3-210ENST00000489475 TSNAXQ99598 290 aaKnown RBP21.58■■□□□ 1.05
HOXB3-210ENST00000489475 REG4Q9BYZ8 158 aa21.58■■□□□ 1.05
HOXB3-210ENST00000489475 HIF1ANQ9NWT6 349 aa21.58■■□□□ 1.05
HOXB3-210ENST00000489475 ZNF257Q9Y2Q1 563 aa21.58■■□□□ 1.05
HOXB3-210ENST00000489475 RNF223E7ERA6 249 aa21.57■■□□□ 1.04
HOXB3-210ENST00000489475 SLC25A17O43808 307 aa21.57■■□□□ 1.04
HOXB3-210ENST00000489475 GATA3P23771 443 aa21.57■■□□□ 1.04
HOXB3-210ENST00000489475 HABP2Q14520 560 aaPredicted RBP21.57■■□□□ 1.04
HOXB3-210ENST00000489475 TMEM167AQ8TBQ9 72 aa21.57■■□□□ 1.04
HOXB3-210ENST00000489475 CFHR4Q92496 578 aa21.57■■□□□ 1.04
HOXB3-210ENST00000489475 RNF5Q99942 180 aa21.57■■□□□ 1.04
HOXB3-210ENST00000489475 VPS13CQ709C8 3753 aa21.57■■□□□ 1.04
HOXB3-210ENST00000489475 CENPVL3A0A0U1RRI6 287 aa21.57■■□□□ 1.04
HOXB3-210ENST00000489475 VENTXO95231 258 aa21.57■■□□□ 1.04
HOXB3-210ENST00000489475 FGF2P09038 288 aa21.57■■□□□ 1.04
HOXB3-210ENST00000489475 TPT1P13693 172 aaKnown RBP21.57■■□□□ 1.04
HOXB3-210ENST00000489475 SAA4P35542 130 aa21.57■■□□□ 1.04
HOXB3-210ENST00000489475 SULT1A1P50225 295 aa21.57■■□□□ 1.04
HOXB3-210ENST00000489475 RPL8P62917 257 aaKnown RBP21.57■■□□□ 1.04
HOXB3-210ENST00000489475 STOML3Q8TAV4 291 aa21.57■■□□□ 1.04
HOXB3-210ENST00000489475 C7orf69Q9H7B7 122 aa21.57■■□□□ 1.04
HOXB3-210ENST00000489475 UBQLN2Q9UHD9 624 aa21.57■■□□□ 1.04
HOXB3-210ENST00000489475 NPFFO15130 113 aa21.56■■□□□ 1.04
HOXB3-210ENST00000489475 EIF5AP63241 154 aaKnown RBP21.56■■□□□ 1.04
HOXB3-210ENST00000489475 TMEM267Q0VDI3 215 aaPredicted RBP21.56■■□□□ 1.04
HOXB3-210ENST00000489475 TMEM217Q8N7C4 229 aa21.56■■□□□ 1.04
HOXB3-210ENST00000489475 HIPK2Q9H2X6 1198 aa21.56■■□□□ 1.04
HOXB3-210ENST00000489475 JTBO76095 146 aa21.55■■□□□ 1.04
HOXB3-210ENST00000489475 PAX6P26367 422 aa21.55■■□□□ 1.04
HOXB3-210ENST00000489475 HOXA1P49639 335 aaPredicted RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms