RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 TMEM186Q96B77 213 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 MTCH1Q9NZJ7 389 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 LOC400499M0QZD8 3231 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 ACTL6BO94805 426 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 TOX4O94842 621 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 ESDP10768 282 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 CAMPP49913 170 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 NHLH1Q02575 133 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 SLAQ13239 276 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 CNN3Q15417 329 aaKnown RBP13.58□□□□□ -0.24
MCF2L-229ENST00000488765 HES3Q5TGS1 186 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 SPTSSAQ969W0 71 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 GCM1Q9NP62 436 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 PDE6DO43924 150 aa13.57□□□□□ -0.24
MCF2L-229ENST00000488765 LRRC10Q5BKY1 277 aa13.57□□□□□ -0.24
MCF2L-229ENST00000488765 BVES-AS1Q5T3Y7 98 aa13.57□□□□□ -0.24
MCF2L-229ENST00000488765 SPATA31B1PQ5VZV4 182 aa13.57□□□□□ -0.24
MCF2L-229ENST00000488765 SLC25A45Q8N413 288 aa13.57□□□□□ -0.24
MCF2L-229ENST00000488765 OR2D2Q9H210 308 aa13.57□□□□□ -0.24
MCF2L-229ENST00000488765 BMI1P35226 326 aa13.57□□□□□ -0.24
MCF2L-229ENST00000488765 ZNF585BQ52M93 769 aa13.57□□□□□ -0.24
MCF2L-229ENST00000488765 PQLC2Q6ZP29 291 aa13.57□□□□□ -0.24
MCF2L-229ENST00000488765 FER1L6-AS1Q8NA97 138 aa13.57□□□□□ -0.24
MCF2L-229ENST00000488765 CLDN23Q96B33 292 aa13.57□□□□□ -0.24
MCF2L-229ENST00000488765 SPSB1Q96BD6 273 aa13.57□□□□□ -0.24
MCF2L-229ENST00000488765 ABHD14BQ96IU4 210 aa13.57□□□□□ -0.24
MCF2L-229ENST00000488765 TIAF1O95411 115 aa13.56□□□□□ -0.24
MCF2L-229ENST00000488765 ARG2P78540 354 aa13.56□□□□□ -0.24
MCF2L-229ENST00000488765 RPL24P83731 157 aaKnown RBP13.56□□□□□ -0.24
MCF2L-229ENST00000488765 RHOGP84095 191 aa13.56□□□□□ -0.24
MCF2L-229ENST00000488765 C17orf67Q0P5P2 114 aa13.56□□□□□ -0.24
MCF2L-229ENST00000488765 MIC13Q5XKP0 118 aa13.56□□□□□ -0.24
MCF2L-229ENST00000488765 OR5A2Q8NGI9 324 aa13.56□□□□□ -0.24
MCF2L-229ENST00000488765 AKIRIN1Q9H9L7 192 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-229ENST00000488765 GJE1A6NN92 205 aa13.56□□□□□ -0.24
MCF2L-229ENST00000488765 CA6P23280 308 aa13.56□□□□□ -0.24
MCF2L-229ENST00000488765 PCSK4Q6UW60 755 aa13.56□□□□□ -0.24
MCF2L-229ENST00000488765 OR10G3Q8NGC4 313 aa13.56□□□□□ -0.24
MCF2L-229ENST00000488765 TNFRSF14Q92956 283 aa13.56□□□□□ -0.24
MCF2L-229ENST00000488765 METTL7AQ9H8H3 244 aa13.56□□□□□ -0.24
MCF2L-229ENST00000488765 LMO7DNF2Z398 122 aa13.56□□□□□ -0.24
MCF2L-229ENST00000488765 FOXA3P55318 350 aaPredicted RBP13.56□□□□□ -0.24
MCF2L-229ENST00000488765 OR2W1Q9Y3N9 320 aa13.56□□□□□ -0.24
MCF2L-229ENST00000488765 HILPDAQ9Y5L2 63 aa13.56□□□□□ -0.24
MCF2L-229ENST00000488765 DSPP15924 2871 aaKnown RBP13.55□□□□□ -0.24
MCF2L-229ENST00000488765 A0A1W2PQD3 144 aa13.55□□□□□ -0.24
MCF2L-229ENST00000488765 FAM231BA6NCW3 169 aa13.55□□□□□ -0.24
MCF2L-229ENST00000488765 OR4C46A6NHA9 309 aa13.55□□□□□ -0.24
MCF2L-229ENST00000488765 C22orf46C9J442 243 aa13.55□□□□□ -0.24
MCF2L-229ENST00000488765 PIAS2O75928 621 aa13.55□□□□□ -0.24
MCF2L-229ENST00000488765 TRIM61Q5EBN2 209 aa13.55□□□□□ -0.24
MCF2L-229ENST00000488765 SAMD13Q5VXD3 122 aa13.55□□□□□ -0.24
MCF2L-229ENST00000488765 CDC42EP3Q9UKI2 254 aa13.55□□□□□ -0.24
MCF2L-229ENST00000488765 FAM181BA6NEQ2 426 aa13.55□□□□□ -0.24
MCF2L-229ENST00000488765 CLDN15P56746 228 aa13.55□□□□□ -0.24
MCF2L-229ENST00000488765 HIST3H3Q16695 136 aa13.55□□□□□ -0.24
MCF2L-229ENST00000488765 FGFBP3Q8TAT2 258 aa13.55□□□□□ -0.24
MCF2L-229ENST00000488765 CT55Q8WUE5 264 aa13.55□□□□□ -0.24
MCF2L-229ENST00000488765 FAM168AQ92567 244 aa13.55□□□□□ -0.24
MCF2L-229ENST00000488765 ULBP2Q9BZM5 246 aa13.55□□□□□ -0.24
MCF2L-229ENST00000488765 IGHV1OR21-1A0A087WYE8 117 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 A0A1W2PR77 199 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 TMPRSS2O15393 492 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 TLX3O43711 291 aaPredicted RBP13.54□□□□□ -0.24
MCF2L-229ENST00000488765 IFI6P09912 130 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 FASLGP48023 281 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 FABP6P51161 128 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 TMEM136Q6ZRR5 245 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 LHFPL2Q6ZUX7 228 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 TMEM147Q9BVK8 224 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 C17orf112F2Z3M2 114 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 IGLV3-1P01715 115 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 CLDN18P56856 261 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.54□□□□□ -0.24
MCF2L-229ENST00000488765 SLC23A3Q6PIS1 610 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 SFXN3Q9BWM7 321 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 THYN1Q9P016 225 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 ABCA1O95477 2261 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 SYNGR1O43759 233 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 APCSP02743 223 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 CTSSP25774 331 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 CRYBB3P26998 211 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 HOXA4Q00056 320 aaPredicted RBP13.54□□□□□ -0.24
MCF2L-229ENST00000488765 C5orf17Q8NAS9 161 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 TMEM116Q8NCL8 245 aa13.54□□□□□ -0.24
MCF2L-229ENST00000488765 CXCL12P48061 93 aa13.53□□□□□ -0.24
MCF2L-229ENST00000488765 SSX8Q7RTT4 187 aa13.53□□□□□ -0.24
MCF2L-229ENST00000488765 FREM1Q5H8C1 2179 aa13.53□□□□□ -0.24
MCF2L-229ENST00000488765 C7orf71A4D174 169 aa13.53□□□□□ -0.24
MCF2L-229ENST00000488765 ZNF32P17041 273 aa13.53□□□□□ -0.24
MCF2L-229ENST00000488765 USF1P22415 310 aaPredicted RBP13.53□□□□□ -0.24
MCF2L-229ENST00000488765 LGALS7P47929 136 aa13.53□□□□□ -0.24
MCF2L-229ENST00000488765 UBE2G1P62253 170 aa13.53□□□□□ -0.24
MCF2L-229ENST00000488765 GUSBP11Q6P575 273 aa13.53□□□□□ -0.24
MCF2L-229ENST00000488765 ST8SIA1Q92185 356 aa13.53□□□□□ -0.24
MCF2L-229ENST00000488765 OXGR1Q96P68 337 aa13.53□□□□□ -0.24
MCF2L-229ENST00000488765 MRPS17Q9Y2R5 130 aaKnown RBP13.53□□□□□ -0.24
MCF2L-229ENST00000488765 TMEM131Q92545 1883 aa13.53□□□□□ -0.24
MCF2L-229ENST00000488765 H3BUT2 72 aa13.52□□□□□ -0.24
MCF2L-229ENST00000488765 DHHO43323 396 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms