RNA–Protein interactions for RNA: ENST00000488536.1

UBA7-208, Transcript of ubiquitin like modifier activating enzyme 7, human

TSL 2

Gene UBA7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA7-208	ENST00000488536	MIOX	Q9UGB7	285 aa		11.49	□□□□□ -0.57
UBA7-208	ENST00000488536	FRY	Q5TBA9	3013 aa		11.49	□□□□□ -0.57
UBA7-208	ENST00000488536	CACNA1D	Q01668	2161 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	RP1L1	Q8IWN7	2480 aa	Predicted RBP	11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	CEP295	Q9C0D2	2601 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	MEX3A	A1L020	520 aa	Known RBP	11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	MAP1LC3B2	A6NCE7	125 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	FAM74A7	A6NL05	159 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	ATXN7	O15265	892 aa	Predicted RBP	11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	MMP23A	O75900	390 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	IGHV2-70	P01814	119 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	SRP19	P09132	144 aa	Known RBP	11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	BCL2	P10415	239 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	USF1	P22415	310 aa	Predicted RBP	11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	OPRK1	P41145	380 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	NPBWR1	P48145	328 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	PRRX1	P54821	245 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	PRCD	Q00LT1	54 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	RAB31	Q13636	194 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	ICAM4	Q14773	271 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	FAM74A3	Q4VXF1	159 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	SSX9	Q7RTT3	188 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	MRPL41	Q8IXM3	137 aa	Known RBP	11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	C15orf54	Q8N8G6	183 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	SLC24A4	Q8NFF2	622 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	OR4C13	Q8NGP0	309 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	OR10X1	Q8NGY0	326 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	NEUROG1	Q92886	237 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	RAB1C	Q92928	201 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	TIMD4	Q96H15	378 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	MAP1LC3B	Q9GZQ8	125 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	MANBAL	Q9NQG1	85 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	CTSZ	Q9UBR2	303 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	VAX2	Q9UIW0	290 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	OR51B2	Q9Y5P1	312 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	USF3	Q68DE3	2245 aa		11.48	□□□□□ -0.57
UBA7-208	ENST00000488536	RAI1	Q7Z5J4	1906 aa	Predicted RBP	11.47	□□□□□ -0.57
UBA7-208	ENST00000488536		B4DEV8	164 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	SEC14L6	B5MCN3	397 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	PRSS46	E5RG02	174 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536		H0YJW9	148 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	TSPAN9	O75954	239 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	IGHV1-8	P0DP01	117 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	NPY1R	P25929	384 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	LGALS7	P47929	136 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	LINC00205	P59089	165 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	CCL20	P78556	96 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	PNRC1	Q12796	327 aa	Predicted RBP	11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	LYPD2	Q6UXB3	125 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	SLC35E3	Q7Z769	313 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	LHX4	Q969G2	390 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	ST6GALNAC6	Q969X2	333 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	FLYWCH2	Q96CP2	140 aa	Known RBP	11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	TMEM133	Q9H2Q1	129 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	PLEKHA3	Q9HB20	300 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	NPVF	Q9HCQ7	196 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	WASHC3	Q9Y3C0	194 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	POLE	Q07864	2286 aa		11.47	□□□□□ -0.57
UBA7-208	ENST00000488536	LOC105371267	A0A1B0GV96	52 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536		A0A1W2PN81	502 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536		A0A1W2PPE3	182 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536	GOSR1	O95249	250 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536	IGHV3-7	P01780	117 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536	CCL3L1	P16619	93 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536	CHRNA7	P36544	502 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536	PSMB3	P49720	205 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536	TFF3	Q07654	80 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536	FFAR4	Q5NUL3	377 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536	BEND2	Q8NDZ0	799 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536	OR8B3	Q8NGG8	313 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536	OR10G9	Q8NGN4	311 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536	OR10G7	Q8NGN6	311 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536	OR1L8	Q8NGR8	309 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536	TMEM167A	Q8TBQ9	72 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536	OR8B2	Q96RD0	313 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536	NABP2	Q9BQ15	211 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536	TXNDC17	Q9BRA2	123 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536	PRELID1	Q9Y255	219 aa		11.46	□□□□□ -0.57
UBA7-208	ENST00000488536		A0A087WWC5	75 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	SMCO3	A2RU48	225 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	PLAU	P00749	431 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	IFNA4	P05014	189 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	C1QTNF9	P0C862	333 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	ATF4	P18848	351 aa	Predicted RBP	11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	FLI1	Q01543	452 aa	Predicted RBP	11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	ZNF726P1	Q15940	193 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	HAGH	Q16775	308 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	VMA21	Q3ZAQ7	101 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	C4orf17	Q53FE4	359 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	C2orf83	Q53S99	150 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	DTX2	Q86UW9	622 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	TGIF2LX	Q8IUE1	241 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	ABHD12	Q8N2K0	398 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	RPP25L	Q8N5L8	163 aa	Known RBP	11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	HARBI1	Q96MB7	349 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	RNF5	Q99942	180 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	RARRES2	Q99969	163 aa		11.45	□□□□□ -0.58
UBA7-208	ENST00000488536	NIPSNAP3B	Q9BS92	247 aa		11.45	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms