RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 AADACL3Q5VUY0 350 aa13.62□□□□□ -0.23
ITGB1-215ENST00000488494 ZNF343Q6P1L6 599 aa13.62□□□□□ -0.23
ITGB1-215ENST00000488494 SNX29P2Q8IUI4 249 aa13.62□□□□□ -0.23
ITGB1-215ENST00000488494 MOB3AQ96BX8 217 aa13.62□□□□□ -0.23
ITGB1-215ENST00000488494 USMG5Q96IX5 58 aa13.62□□□□□ -0.23
ITGB1-215ENST00000488494 ZNF2Q9BSG1 426 aaPredicted RBP13.62□□□□□ -0.23
ITGB1-215ENST00000488494 AKIP1Q9NQ31 210 aa13.62□□□□□ -0.23
ITGB1-215ENST00000488494 LSM4Q9Y4Z0 139 aaKnown RBP13.62□□□□□ -0.23
ITGB1-215ENST00000488494 FAM223BA6NKX1 122 aa13.61□□□□□ -0.23
ITGB1-215ENST00000488494 RBFOX2O43251 390 aaKnown RBP eCLIP13.61□□□□□ -0.23
ITGB1-215ENST00000488494 HPGDSO60760 199 aa13.61□□□□□ -0.23
ITGB1-215ENST00000488494 NAT1P18440 290 aa13.61□□□□□ -0.23
ITGB1-215ENST00000488494 HRH1P35367 487 aa13.61□□□□□ -0.23
ITGB1-215ENST00000488494 CTF1Q16619 201 aa13.61□□□□□ -0.23
ITGB1-215ENST00000488494 C19orf35Q6ZS72 473 aa13.61□□□□□ -0.23
ITGB1-215ENST00000488494 HAPLN4Q86UW8 402 aa13.61□□□□□ -0.23
ITGB1-215ENST00000488494 ANKRD13BQ86YJ7 626 aa13.61□□□□□ -0.23
ITGB1-215ENST00000488494 FAM223AQ8IWN6 122 aa13.61□□□□□ -0.23
ITGB1-215ENST00000488494 FYTTD1Q96QD9 318 aaKnown RBP13.61□□□□□ -0.23
ITGB1-215ENST00000488494 OR4C12Q96R67 309 aa13.61□□□□□ -0.23
ITGB1-215ENST00000488494 RSRP1Q9BUV0 290 aa13.61□□□□□ -0.23
ITGB1-215ENST00000488494 FXYD6Q9H0Q3 95 aa13.61□□□□□ -0.23
ITGB1-215ENST00000488494 TNCP24821 2201 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 A0A1B0GW64 132 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 RLN1P04808 185 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 IL6RP08887 468 aaPredicted RBP13.6□□□□□ -0.23
ITGB1-215ENST00000488494 MYOD1P15172 320 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 SPNP16150 400 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 ELK1P19419 428 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 HLA-DMAP28067 261 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 GNRHRP30968 328 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 MAS1LP35410 378 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 RORCP51449 518 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 RPL8P62917 257 aaKnown RBP13.6□□□□□ -0.23
ITGB1-215ENST00000488494 GPR107Q5VW38 600 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 OR4A47Q6IF82 309 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 TTC9CQ8N5M4 171 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 OR6Q1Q8NGQ2 317 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 GPX8Q8TED1 209 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 BORCS5Q969J3 196 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 CMTM3Q96MX0 182 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 ELOVL1Q9BW60 279 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 HRASLSQ9HDD0 168 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 PEF1Q9UBV8 284 aaKnown RBP13.6□□□□□ -0.23
ITGB1-215ENST00000488494 ZNF257Q9Y2Q1 563 aa13.6□□□□□ -0.23
ITGB1-215ENST00000488494 TRBV9A0A0B4J1U6 114 aa13.59□□□□□ -0.23
ITGB1-215ENST00000488494 SMIM31A0A1B0GVY4 71 aa13.59□□□□□ -0.23
ITGB1-215ENST00000488494 DPPA5A6NC42 116 aa13.59□□□□□ -0.23
ITGB1-215ENST00000488494 E7EUB6 86 aa13.59□□□□□ -0.23
ITGB1-215ENST00000488494 S1PR2O95136 353 aa13.59□□□□□ -0.23
ITGB1-215ENST00000488494 AREGP15514 252 aa13.59□□□□□ -0.23
ITGB1-215ENST00000488494 HLA-GP17693 338 aa13.59□□□□□ -0.23
ITGB1-215ENST00000488494 SYNJ2BPP57105 145 aa13.59□□□□□ -0.23
ITGB1-215ENST00000488494 TAS2R31P59538 309 aa13.59□□□□□ -0.23
ITGB1-215ENST00000488494 KLF5Q13887 457 aaPredicted RBP13.59□□□□□ -0.23
ITGB1-215ENST00000488494 DHRS11Q6UWP2 260 aa13.59□□□□□ -0.23
ITGB1-215ENST00000488494 SLC25A42Q86VD7 318 aa13.59□□□□□ -0.23
ITGB1-215ENST00000488494 OR4A5Q8NH83 315 aa13.59□□□□□ -0.23
ITGB1-215ENST00000488494 MRPS26Q9BYN8 205 aaKnown RBP13.59□□□□□ -0.23
ITGB1-215ENST00000488494 SCPEP1Q9HB40 452 aa13.59□□□□□ -0.23
ITGB1-215ENST00000488494 BET1LQ9NYM9 111 aa13.59□□□□□ -0.23
ITGB1-215ENST00000488494 ADAM30Q9UKF2 790 aa13.59□□□□□ -0.23
ITGB1-215ENST00000488494 NPIPB5A8MRT5 1133 aa13.58□□□□□ -0.24
ITGB1-215ENST00000488494 OR2J3O76001 311 aa13.58□□□□□ -0.24
ITGB1-215ENST00000488494 ZNF735P0CB33 412 aa13.58□□□□□ -0.24
ITGB1-215ENST00000488494 RCVRNP35243 200 aa13.58□□□□□ -0.24
ITGB1-215ENST00000488494 ATP5G2Q06055 141 aa13.58□□□□□ -0.24
ITGB1-215ENST00000488494 RPEL1Q2QD12 228 aa13.58□□□□□ -0.24
ITGB1-215ENST00000488494 C15orf32Q32M92 178 aa13.58□□□□□ -0.24
ITGB1-215ENST00000488494 VAX1Q5SQQ9 334 aa13.58□□□□□ -0.24
ITGB1-215ENST00000488494 LYSMD2Q8IV50 215 aa13.58□□□□□ -0.24
ITGB1-215ENST00000488494 NECAP1Q8NC96 275 aa13.58□□□□□ -0.24
ITGB1-215ENST00000488494 OR9G4Q8NGQ1 327 aa13.58□□□□□ -0.24
ITGB1-215ENST00000488494 CD300LFQ8TDQ1 290 aa13.58□□□□□ -0.24
ITGB1-215ENST00000488494 AP3S1Q92572 193 aa13.58□□□□□ -0.24
ITGB1-215ENST00000488494 AIFM2Q9BRQ8 373 aa13.58□□□□□ -0.24
ITGB1-215ENST00000488494 FAM25AB3EWG3 89 aa13.57□□□□□ -0.24
ITGB1-215ENST00000488494 FAM25CB3EWG5 89 aa13.57□□□□□ -0.24
ITGB1-215ENST00000488494 FAM25GB3EWG6 89 aa13.57□□□□□ -0.24
ITGB1-215ENST00000488494 HPRT1P00492 218 aa13.57□□□□□ -0.24
ITGB1-215ENST00000488494 GP9P14770 177 aa13.57□□□□□ -0.24
ITGB1-215ENST00000488494 NQO2P16083 231 aa13.57□□□□□ -0.24
ITGB1-215ENST00000488494 RNASE12Q5GAN4 147 aaKnown RBP13.57□□□□□ -0.24
ITGB1-215ENST00000488494 MZT2AQ6P582 158 aa13.57□□□□□ -0.24
ITGB1-215ENST00000488494 DMBX1Q8NFW5 382 aa13.57□□□□□ -0.24
ITGB1-215ENST00000488494 OR6F1Q8NGZ6 308 aa13.57□□□□□ -0.24
ITGB1-215ENST00000488494 PLEKHA2Q9HB19 425 aa13.57□□□□□ -0.24
ITGB1-215ENST00000488494 SLC2A9Q9NRM0 540 aa13.57□□□□□ -0.24
ITGB1-215ENST00000488494 TMEM140Q9NV12 185 aa13.57□□□□□ -0.24
ITGB1-215ENST00000488494 COMMD9Q9P000 198 aa13.57□□□□□ -0.24
ITGB1-215ENST00000488494 TRAV3A0A0B4J244 114 aa13.56□□□□□ -0.24
ITGB1-215ENST00000488494 BMPR1BO00238 502 aa13.56□□□□□ -0.24
ITGB1-215ENST00000488494 PGLYRP1O75594 196 aaPredicted RBP13.56□□□□□ -0.24
ITGB1-215ENST00000488494 REG1AP05451 166 aa13.56□□□□□ -0.24
ITGB1-215ENST00000488494 RPA2P15927 270 aa13.56□□□□□ -0.24
ITGB1-215ENST00000488494 ERVK-16P61578 105 aa13.56□□□□□ -0.24
ITGB1-215ENST00000488494 POU2AF1Q16633 256 aa13.56□□□□□ -0.24
ITGB1-215ENST00000488494 GPR141Q7Z602 305 aa13.56□□□□□ -0.24
ITGB1-215ENST00000488494 CMTM1Q8IZ96 169 aa13.56□□□□□ -0.24
ITGB1-215ENST00000488494 FBXL7Q9UJT9 491 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms