RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 LRRC42Q9Y546 428 aa4.55□□□□□ -1.68
CDHR3-213ENST00000488386 RBM7Q9Y580 266 aaKnown RBP4.55□□□□□ -1.68
CDHR3-213ENST00000488386 TRBV6-7A0A0A0MS04 114 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 IGKV1D-13A0A0B4J2D9 117 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 MEIS3P1A6NDR6 274 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 SSX5O60225 188 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 APOA2P02652 100 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 PRH1P02810 166 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 OR5H8P0DN80 308 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 IGKV1-13P0DP09 117 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 TPPP2P59282 170 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 RPL30P62888 115 aaKnown RBP4.54□□□□□ -1.68
CDHR3-213ENST00000488386 ZNF616Q08AN1 781 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 FXYD3Q14802 87 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 MRGPRG-AS1Q2M3A8 158 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 CDNFQ49AH0 187 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 ACTBL2Q562R1 376 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 C10orf55Q5SWW7 151 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 SFXN4Q6P4A7 337 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 C19orf35Q6ZS72 473 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 GVQW1Q8N7I0 195 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 OR4A4PQ8NGN8 299 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 OR10J5Q8NHC4 309 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 ARPC1AQ92747 370 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 PTX4Q96A99 478 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 FLYWCH2Q96CP2 140 aaKnown RBP4.54□□□□□ -1.68
CDHR3-213ENST00000488386 UBE2E2Q96LR5 201 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 HARBI1Q96MB7 349 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 GINS4Q9BRT9 223 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 CENPOQ9BU64 300 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 MCRIP2Q9BUT9 160 aaKnown RBP4.54□□□□□ -1.68
CDHR3-213ENST00000488386 TOLLIPQ9H0E2 274 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 STUB1Q9UNE7 303 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 FOXA2Q9Y261 457 aaPredicted RBP4.54□□□□□ -1.68
CDHR3-213ENST00000488386 NUBP2Q9Y5Y2 271 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 SELENOKQ9Y6D0 94 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 RYR3Q15413 4870 aa4.54□□□□□ -1.68
CDHR3-213ENST00000488386 KMT2CQ8NEZ4 4911 aaKnown RBP4.53□□□□□ -1.68
CDHR3-213ENST00000488386 METTL21EPA6NDL7 271 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 LINC01619G3V211 115 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 ITGB1BP1O14713 200 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 OVOL1O14753 267 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 SAP30O75446 220 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 CNIH1O95406 144 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 CRYZL1O95825 349 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 TRBV12-3P01733 135 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 TRGV3P03979 118 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 CRYGBP07316 175 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 LGALS1P09382 135 aaKnown RBP4.53□□□□□ -1.68
CDHR3-213ENST00000488386 MYOD1P15172 320 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 CD36P16671 472 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 MC5RP33032 325 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 DUTP33316 252 aaKnown RBP4.53□□□□□ -1.68
CDHR3-213ENST00000488386 TALDO1P37837 337 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 PSMD7P51665 324 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 LSM3P62310 102 aaKnown RBP4.53□□□□□ -1.68
CDHR3-213ENST00000488386 TNXAQ16473 311 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 IDNKQ5T6J7 187 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 C9orf66Q5T8R8 295 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 ZNF660Q6AZW8 331 aaPredicted RBP4.53□□□□□ -1.68
CDHR3-213ENST00000488386 ZNF773Q6PK81 442 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 PDPNQ86YL7 162 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 H1FOOQ8IZA3 346 aaPredicted RBP4.53□□□□□ -1.68
CDHR3-213ENST00000488386 VKORC1L1Q8N0U8 176 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 SLC25A38Q96DW6 304 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 ZNF580Q9UK33 172 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 MGAT4AQ9UM21 535 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 SSR3Q9UNL2 185 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 TNFRSF18Q9Y5U5 241 aa4.53□□□□□ -1.68
CDHR3-213ENST00000488386 TRAV18A0A075B6X5 111 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 TRIM64CA6NLI5 447 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 TNFSF12O43508 249 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 FCGR3BO75015 233 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 RBBP9O75884 186 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 OR8U8P0C7N1 319 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 SAA1P0DJI8 122 aaPredicted RBP4.52□□□□□ -1.69
CDHR3-213ENST00000488386 SPNP16150 400 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 EDN2P20800 178 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 SLC6A1P30531 599 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 FGF9P31371 208 aaPredicted RBP4.52□□□□□ -1.69
CDHR3-213ENST00000488386 CRIP2P52943 208 aaPredicted RBP4.52□□□□□ -1.69
CDHR3-213ENST00000488386 GNG2P59768 71 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 VAX1Q5SQQ9 334 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 HACD4Q5VWC8 232 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 ZNF562Q6V9R5 426 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 POC5Q8NA72 575 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 ACOT12Q8WYK0 555 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 TSNAXQ99598 290 aaKnown RBP4.52□□□□□ -1.69
CDHR3-213ENST00000488386 PHB2Q99623 299 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 B9D2Q9BPU9 175 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 DCUN1D5Q9BTE7 237 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 GPR61Q9BZJ8 451 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 Q9H521 79 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 SEPSECSQ9HD40 501 aaKnown RBP4.52□□□□□ -1.69
CDHR3-213ENST00000488386 CCL28Q9NRJ3 127 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 RHBDL2Q9NX52 303 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 COA4Q9NYJ1 87 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 TAS2R8Q9NYW2 309 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 SPATA2Q9UM82 520 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 ZNF256Q9Y2P7 627 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms