RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 MMDQ15546 238 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 RNF212Q495C1 297 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 LBHQ53QV2 105 aaPredicted RBP4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 CT45A1Q5HYN5 189 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 SERTAD4-AS1Q5TG53 156 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 OR2G6Q5TZ20 316 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 ASCL4Q6XD76 172 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 ZNF497Q6ZNH5 498 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 NRARPQ7Z6K4 114 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 CCDC190Q86UF4 302 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 FAM71E2Q8N5Q1 922 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 LINC00311Q8N616 119 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 ZNF439Q8NDP4 499 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 Q8NFD4 153 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 OR52M1Q8NGK5 317 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 CT45A3Q8NHU0 189 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 GPR148Q8TDV2 347 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 CASTOR1Q8WTX7 329 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 C4orf3Q8WVX3 66 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 APH1BQ8WW43 257 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 ST6GALNAC6Q969X2 333 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 TMEM106AQ96A25 262 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 RNF125Q96EQ8 232 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 ZNF436Q9C0F3 470 aaPredicted RBP4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 ALX4Q9H161 411 aaPredicted RBP4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 PARP11Q9NR21 331 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 TRAPPC2LQ9UL33 140 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 STUB1Q9UNE7 303 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 DNAH1Q9P2D7 4330 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 LYSTQ99698 3801 aa4.89□□□□□ -1.63
TNFSF4-203ENST00000488053 LOC100130705A0A1B0GUX0 176 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 CBY3A6NI87 242 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 LINC00587B1AMM8 73 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 MCRIP1C9JLW8 97 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 C3orf84H3BNL1 204 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 ATP6V0E1O15342 81 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 SPINT2O43291 252 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 LALBAP00709 142 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 HBZP02008 142 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 RCC1P18754 421 aaPredicted RBP4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 PSMB8P28062 276 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 PSMB9P28065 219 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 BDKRB2P30411 391 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 RRAS2P62070 204 aaPredicted RBP4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 ZNF616Q08AN1 781 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 RAB40BQ12829 278 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 COTL1Q14019 142 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 GNMTQ14749 295 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 ECSCRQ19T08 205 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 KLHL22Q53GT1 634 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 NHLRC3Q5JS37 347 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 RAB12Q6IQ22 244 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 RPL22L1Q6P5R6 122 aaKnown RBP4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 SLC25A48Q6ZT89 311 aaKnown RBP4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 HSD17B13Q7Z5P4 300 aaPredicted RBP4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 TBC1D26Q86UD7 250 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 SBSPONQ8IVN8 264 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 C9orf62Q8N4C0 152 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 JAGN1Q8N5M9 183 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 ZNF491Q8N8L2 437 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 ZFP41Q8N8Y5 198 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 PRR26Q8N8Z3 221 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 OR6M1Q8NGM8 313 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 OR1N2Q8NGR9 330 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 DCUN1D4Q92564 292 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 Q96MT0 163 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 RCHY1Q96PM5 261 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 MRPL20Q9BYC9 149 aaKnown RBP4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 BANF2Q9H503 90 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 DUSP21Q9H596 190 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 ISYNA1Q9NPH2 558 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 TMEM138Q9NPI0 162 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 OR2S2Q9NQN1 319 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 IL36GQ9NZH8 169 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 KIAA1456Q9P272 454 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 MRPS28Q9Y2Q9 187 aaKnown RBP4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 SMAD5-AS1Q9Y6J3 95 aa4.88□□□□□ -1.63
TNFSF4-203ENST00000488053 EPPK1P58107 5090 aaKnown RBP4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 HYDINQ4G0P3 5121 aa4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 TRAV8-7A0A075B6U6 113 aa4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 TRAV41A0A0B4J266 112 aa4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 PTGES3LE9PB15 166 aa4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 SULT1C2O00338 296 aa4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 NUPL2O15504 423 aaKnown RBP4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 TXNL1O43396 289 aa4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 SAP30O75446 220 aa4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 MAS1P04201 325 aa4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 IGF1P05019 195 aa4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 OR8U8P0C7N1 319 aa4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 OR5H8P0DN80 308 aa4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 GTF2F2P13984 249 aa4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 PTBP1P26599 531 aaKnown RBP eCLIP4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 CHATP28329 748 aa4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 BLVRBP30043 206 aaPredicted RBP4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 PPP1CCP36873 323 aaKnown RBP4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 ACTBP60709 375 aa4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 SPCS3P61009 180 aa4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 NCS1P62166 190 aa4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 LSM3P62310 102 aaKnown RBP4.87□□□□□ -1.63
TNFSF4-203ENST00000488053 FGL1Q08830 312 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms