RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 NECAP1Q8NC96 275 aa18.63■□□□□ 0.57
LIME1-206ENST00000487026 BEST4Q8NFU0 473 aa18.63■□□□□ 0.57
LIME1-206ENST00000487026 SECTM1Q8WVN6 248 aa18.63■□□□□ 0.57
LIME1-206ENST00000487026 PEMTQ9UBM1 199 aa18.63■□□□□ 0.57
LIME1-206ENST00000487026 A0A1B0GW64 132 aa18.62■□□□□ 0.57
LIME1-206ENST00000487026 HLA-AP01891 365 aaKnown RBP18.62■□□□□ 0.57
LIME1-206ENST00000487026 MECP2P51608 486 aaKnown RBP18.62■□□□□ 0.57
LIME1-206ENST00000487026 GTSCR1Q86UQ5 136 aa18.62■□□□□ 0.57
LIME1-206ENST00000487026 Q8N402 240 aa18.62■□□□□ 0.57
LIME1-206ENST00000487026 TMEM167AQ8TBQ9 72 aa18.62■□□□□ 0.57
LIME1-206ENST00000487026 CITED4Q96RK1 184 aa18.62■□□□□ 0.57
LIME1-206ENST00000487026 TENM2Q9NT68 2774 aa18.61■□□□□ 0.57
LIME1-206ENST00000487026 MYOD1P15172 320 aa18.61■□□□□ 0.57
LIME1-206ENST00000487026 RPL27AP46776 148 aaKnown RBP18.61■□□□□ 0.57
LIME1-206ENST00000487026 NEDD8Q15843 81 aa18.61■□□□□ 0.57
LIME1-206ENST00000487026 HAGHQ16775 308 aa18.61■□□□□ 0.57
LIME1-206ENST00000487026 ZNF66Q6ZN08 573 aa18.61■□□□□ 0.57
LIME1-206ENST00000487026 SLC25A42Q86VD7 318 aa18.61■□□□□ 0.57
LIME1-206ENST00000487026 HOGA1Q86XE5 327 aa18.61■□□□□ 0.57
LIME1-206ENST00000487026 TUBA4BQ9H853 241 aa18.61■□□□□ 0.57
LIME1-206ENST00000487026 ZNF257Q9Y2Q1 563 aa18.61■□□□□ 0.57
LIME1-206ENST00000487026 DMRT1Q9Y5R6 373 aa18.61■□□□□ 0.57
LIME1-206ENST00000487026 S4R3C0 116 aa18.61■□□□□ 0.57
LIME1-206ENST00000487026 DPPA5A6NC42 116 aa18.6■□□□□ 0.57
LIME1-206ENST00000487026 IGHV3-23P01764 117 aa18.6■□□□□ 0.57
LIME1-206ENST00000487026 EDN2P20800 178 aa18.6■□□□□ 0.57
LIME1-206ENST00000487026 VSTM2AQ8TAG5 236 aa18.6■□□□□ 0.57
LIME1-206ENST00000487026 GAR1Q9NY12 217 aaKnown RBP18.6■□□□□ 0.57
LIME1-206ENST00000487026 FBXL7Q9UJT9 491 aa18.6■□□□□ 0.57
LIME1-206ENST00000487026 ETV7Q9Y603 341 aa18.6■□□□□ 0.57
LIME1-206ENST00000487026 NDUFB8O95169 186 aa18.59■□□□□ 0.57
LIME1-206ENST00000487026 OR2C1O95371 312 aa18.59■□□□□ 0.57
LIME1-206ENST00000487026 AREGP15514 252 aa18.59■□□□□ 0.57
LIME1-206ENST00000487026 CD300EQ496F6 205 aaPredicted RBP18.59■□□□□ 0.57
LIME1-206ENST00000487026 ZFAND6Q6FIF0 208 aa18.59■□□□□ 0.57
LIME1-206ENST00000487026 OR13F1Q8NGS4 319 aa18.59■□□□□ 0.57
LIME1-206ENST00000487026 AUNIPQ9H7T9 357 aa18.59■□□□□ 0.57
LIME1-206ENST00000487026 PALMDQ9NP74 551 aa18.59■□□□□ 0.57
LIME1-206ENST00000487026 SLC2A9Q9NRM0 540 aa18.59■□□□□ 0.57
LIME1-206ENST00000487026 NPIPB5A8MRT5 1133 aa18.58■□□□□ 0.56
LIME1-206ENST00000487026 AIREO43918 545 aa18.58■□□□□ 0.56
LIME1-206ENST00000487026 HRASP01112 189 aa18.58■□□□□ 0.56
LIME1-206ENST00000487026 ZNF735P0CB33 412 aa18.58■□□□□ 0.56
LIME1-206ENST00000487026 MAS1LP35410 378 aa18.58■□□□□ 0.56
LIME1-206ENST00000487026 FANCD2OSQ96PS1 177 aa18.58■□□□□ 0.56
LIME1-206ENST00000487026 CSMD3Q7Z407 3707 aa18.58■□□□□ 0.56
LIME1-206ENST00000487026 RYR2Q92736 4967 aa18.57■□□□□ 0.56
LIME1-206ENST00000487026 MEIS3P1A6NDR6 274 aa18.57■□□□□ 0.56
LIME1-206ENST00000487026 PPYP01298 95 aa18.57■□□□□ 0.56
LIME1-206ENST00000487026 REG1AP05451 166 aa18.57■□□□□ 0.56
LIME1-206ENST00000487026 TGFBR1P36897 503 aa18.57■□□□□ 0.56
LIME1-206ENST00000487026 SCAND1P57086 179 aa18.57■□□□□ 0.56
LIME1-206ENST00000487026 FXYD4P59646 89 aa18.57■□□□□ 0.56
LIME1-206ENST00000487026 RPL8P62917 257 aaKnown RBP18.57■□□□□ 0.56
LIME1-206ENST00000487026 SPAG16Q8N0X2 631 aa18.57■□□□□ 0.56
LIME1-206ENST00000487026 KCTD12Q96CX2 325 aaKnown RBP18.57■□□□□ 0.56
LIME1-206ENST00000487026 SPATA25Q9BR10 227 aa18.57■□□□□ 0.56
LIME1-206ENST00000487026 SLC5A7Q9GZV3 580 aa18.57■□□□□ 0.56
LIME1-206ENST00000487026 EDA2RQ9HAV5 297 aa18.57■□□□□ 0.56
LIME1-206ENST00000487026 PLEKHA3Q9HB20 300 aa18.57■□□□□ 0.56
LIME1-206ENST00000487026 DIABLOQ9NR28 239 aa18.57■□□□□ 0.56
LIME1-206ENST00000487026 SELENOKQ9Y6D0 94 aa18.57■□□□□ 0.56
LIME1-206ENST00000487026 ZNF785A8K8V0 405 aa18.56■□□□□ 0.56
LIME1-206ENST00000487026 SULT1C2O00338 296 aa18.56■□□□□ 0.56
LIME1-206ENST00000487026 GGCTO75223 188 aaKnown RBP18.56■□□□□ 0.56
LIME1-206ENST00000487026 PSMB6P28072 239 aa18.56■□□□□ 0.56
LIME1-206ENST00000487026 KIR2DS2P43631 304 aa18.56■□□□□ 0.56
LIME1-206ENST00000487026 CD81P60033 236 aa18.56■□□□□ 0.56
LIME1-206ENST00000487026 OR4A47Q6IF82 309 aa18.56■□□□□ 0.56
LIME1-206ENST00000487026 CLEC19AQ6UXS0 136 aa18.56■□□□□ 0.56
LIME1-206ENST00000487026 OR2K2Q8NGT1 345 aa18.56■□□□□ 0.56
LIME1-206ENST00000487026 STARD9Q9P2P6 4700 aa18.56■□□□□ 0.56
LIME1-206ENST00000487026 A0A0A6YYH2 397 aa18.55■□□□□ 0.56
LIME1-206ENST00000487026 A6NJ64 397 aa18.55■□□□□ 0.56
LIME1-206ENST00000487026 CGB1A6NKQ9 187 aa18.55■□□□□ 0.56
LIME1-206ENST00000487026 CRYGCP07315 174 aa18.55■□□□□ 0.56
LIME1-206ENST00000487026 FOLR2P14207 255 aa18.55■□□□□ 0.56
LIME1-206ENST00000487026 HLA-GP17693 338 aa18.55■□□□□ 0.56
LIME1-206ENST00000487026 DEFB114Q30KQ6 69 aa18.55■□□□□ 0.56
LIME1-206ENST00000487026 DYNLRB2Q8TF09 96 aa18.55■□□□□ 0.56
LIME1-206ENST00000487026 HRASLSQ9HDD0 168 aa18.55■□□□□ 0.56
LIME1-206ENST00000487026 SACSQ9NZJ4 4579 aa18.55■□□□□ 0.56
LIME1-206ENST00000487026 TRAV3A0A0B4J244 114 aa18.54■□□□□ 0.56
LIME1-206ENST00000487026 C2orf70A6NJV1 201 aa18.54■□□□□ 0.56
LIME1-206ENST00000487026 MSMO1Q15800 293 aa18.54■□□□□ 0.56
LIME1-206ENST00000487026 TIMM50Q3ZCQ8 353 aa18.54■□□□□ 0.56
LIME1-206ENST00000487026 ZBTB34Q8NCN2 500 aa18.54■□□□□ 0.56
LIME1-206ENST00000487026 ISOC1Q96CN7 298 aa18.54■□□□□ 0.56
LIME1-206ENST00000487026 CCDC140Q96MF4 163 aa18.54■□□□□ 0.56
LIME1-206ENST00000487026 NEURL2Q9BR09 285 aa18.54■□□□□ 0.56
LIME1-206ENST00000487026 CD7P09564 240 aa18.53■□□□□ 0.56
LIME1-206ENST00000487026 CTRB1P17538 263 aa18.53■□□□□ 0.56
LIME1-206ENST00000487026 ARL3P36405 182 aa18.53■□□□□ 0.56
LIME1-206ENST00000487026 GUCA2BQ16661 112 aa18.53■□□□□ 0.56
LIME1-206ENST00000487026 CTRB2Q6GPI1 263 aa18.53■□□□□ 0.56
LIME1-206ENST00000487026 ZNF818PQ6ZRF7 136 aa18.53■□□□□ 0.56
LIME1-206ENST00000487026 OR5AP2Q8NGF4 316 aa18.53■□□□□ 0.56
LIME1-206ENST00000487026 CACNG8Q8WXS5 425 aa18.53■□□□□ 0.56
LIME1-206ENST00000487026 RETNQ9HD89 108 aa18.53■□□□□ 0.56
LIME1-206ENST00000487026 BET1LQ9NYM9 111 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms