RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 SPRR3Q9UBC9 169 aa10.12□□□□□ -0.79
COL3A1-206ENST00000487010 TMEM265A0A087WTH1 108 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 K7EN84 100 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 LAMTOR5O43504 91 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 GFRA3O60609 400 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 CRISP2P16562 243 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 CD33P20138 364 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 GCHFRP30047 84 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 RPL29P47914 159 aaKnown RBP10.11□□□□□ -0.79
COL3A1-206ENST00000487010 TGFBR3Q03167 851 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 HLA-DRB5Q30154 266 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 TRAT1Q6PIZ9 186 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 TOMM20LQ6UXN7 152 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 ZNF705AQ6ZN79 300 aaPredicted RBP10.11□□□□□ -0.79
COL3A1-206ENST00000487010 TEX43Q6ZNM6 134 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 MDS2Q8NDY4 140 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 Q8TCH9 128 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 TMEM68Q96MH6 324 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 C20orf144Q9BQM9 153 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 DCTN5Q9BTE1 182 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 MRPL18Q9H0U6 180 aaKnown RBP10.11□□□□□ -0.79
COL3A1-206ENST00000487010 FRYLO94915 3013 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 SLC17A3O00476 420 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 TNFSF13O75888 250 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 SERF1AO75920 110 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 LYZL6O75951 148 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 RANP62826 216 aaKnown RBP10.11□□□□□ -0.79
COL3A1-206ENST00000487010 RPL31P62899 125 aaKnown RBP10.11□□□□□ -0.79
COL3A1-206ENST00000487010 LTC4SQ16873 150 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 TPTE2P1Q5T6R2 138 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 ABHD12Q8N2K0 398 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 C1orf159Q96HA4 380 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 PARD6AQ9NPB6 346 aa10.11□□□□□ -0.79
COL3A1-206ENST00000487010 LSM4Q9Y4Z0 139 aaKnown RBP10.11□□□□□ -0.79
COL3A1-206ENST00000487010 TET2Q6N021 2002 aaPredicted RBP10.11□□□□□ -0.79
COL3A1-206ENST00000487010 IL6RP08887 468 aaPredicted RBP10.1□□□□□ -0.79
COL3A1-206ENST00000487010 LGALS4P56470 323 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 RELBQ01201 579 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 SMIM21Q3B7S5 101 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 TDRG1Q3Y452 100 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 INO80CQ6PI98 192 aaPredicted RBP10.1□□□□□ -0.79
COL3A1-206ENST00000487010 VKORC1L1Q8N0U8 176 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 OR1L6Q8NGR2 347 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 SSMEM1Q8WWF3 244 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 C11orf52Q96A22 123 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 MIEN1Q9BRT3 115 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 NPVFQ9HCQ7 196 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 LY96Q9Y6Y9 160 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 TRGV10A0A0A0MS01 117 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 TRGV5A0A0B4J1U4 118 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 TRAV3A0A0B4J244 114 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 A0A1B0GWJ7 208 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 C21orf140B9A014 251 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 C9JCJ5 164 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 M0R1X1 148 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 ZNF25P17030 456 aaPredicted RBP10.1□□□□□ -0.79
COL3A1-206ENST00000487010 ERVK-16P61578 105 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 EFNB3Q15768 340 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 MORN2Q502X0 79 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 CD177Q8N6Q3 437 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 HSPB9Q9BQS6 159 aa10.1□□□□□ -0.79
COL3A1-206ENST00000487010 SEPSECSQ9HD40 501 aaKnown RBP10.1□□□□□ -0.79
COL3A1-206ENST00000487010 A8MXE2 369 aa10.09□□□□□ -0.79
COL3A1-206ENST00000487010 MT-CO2P00403 227 aa10.09□□□□□ -0.79
COL3A1-206ENST00000487010 RHOBP62745 196 aa10.09□□□□□ -0.79
COL3A1-206ENST00000487010 Q0VG73 95 aa10.09□□□□□ -0.79
COL3A1-206ENST00000487010 EDDM3AQ14507 147 aa10.09□□□□□ -0.79
COL3A1-206ENST00000487010 LPAL2Q16609 132 aa10.09□□□□□ -0.79
COL3A1-206ENST00000487010 KRTCAP3Q53RY4 240 aa10.09□□□□□ -0.79
COL3A1-206ENST00000487010 SPATA31B1PQ5VZV4 182 aa10.09□□□□□ -0.79
COL3A1-206ENST00000487010 FAM90A1Q86YD7 464 aa10.09□□□□□ -0.79
COL3A1-206ENST00000487010 OR5AU1Q8NGC0 362 aa10.09□□□□□ -0.79
COL3A1-206ENST00000487010 PLPPR2Q96GM1 343 aa10.09□□□□□ -0.79
COL3A1-206ENST00000487010 EAF1Q96JC9 268 aaPredicted RBP10.09□□□□□ -0.79
COL3A1-206ENST00000487010 CDX2Q99626 313 aaPredicted RBP10.09□□□□□ -0.79
COL3A1-206ENST00000487010 FAM234AQ9H0X4 552 aa10.09□□□□□ -0.79
COL3A1-206ENST00000487010 GNG12Q9UBI6 72 aa10.09□□□□□ -0.79
COL3A1-206ENST00000487010 MED13Q9UHV7 2174 aa10.09□□□□□ -0.79
COL3A1-206ENST00000487010 TRGV8A0A0C4DH27 118 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 FCN1O00602 326 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 TIMM8AO60220 97 aaPredicted RBP10.08□□□□□ -0.8
COL3A1-206ENST00000487010 FOXH1O75593 365 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 RPLP1P05386 114 aaKnown RBP10.08□□□□□ -0.8
COL3A1-206ENST00000487010 CDKN1AP38936 164 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 IER3P46695 156 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 TMEM183BQ1AE95 376 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 RPEL1Q2QD12 228 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 ARSJQ5FYB0 599 aaPredicted RBP10.08□□□□□ -0.8
COL3A1-206ENST00000487010 RNFT1Q5M7Z0 435 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 BAGE3Q86Y29 109 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 BAGE2Q86Y30 109 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 STPG3Q8N7X2 389 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 UHRF2Q96PU4 802 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 TMEM140Q9NV12 185 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 JPT1Q9UK76 154 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 TCF19Q9Y242 345 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 DMDP11532 3685 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 A0A1W2PNU3 283 aaPredicted RBP10.08□□□□□ -0.8
COL3A1-206ENST00000487010 AREGP15514 252 aa10.08□□□□□ -0.8
COL3A1-206ENST00000487010 CD46P15529 392 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms