RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 COL8A2P25067 703 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 ERVK-16P61578 105 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 KCNMB1Q16558 191 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 MED12LQ86YW9 2145 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 OR52L2PQ8NGH6 319 aa10.42□□□□□ -0.74
SHROOM3-208ENST00000486758 HSBP1O75506 76 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 CDKN1AP38936 164 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 CAMPP49913 170 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 RND2P52198 227 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 TCTAP57738 103 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 Q56UQ5 140 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 MIC13Q5XKP0 118 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 CRIP3Q6Q6R5 217 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 GBGT1Q8N5D6 347 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 OR2Z1Q8NG97 314 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 ST6GALNAC6Q969X2 333 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 TECTBQ96PL2 329 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 ARL2-SNX15V9GYD0 113 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 MKRN2OSH3BPM6 223 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 S1PR2O95136 353 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 TMEM178AQ8NBL3 297 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 PLPPR1Q8TBJ4 325 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 MGAQ8IWI9 3026 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 IGLV3-32A0A0A0MS00 114 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 IGKV1-6A0A0C4DH72 117 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 SCO2A0A1W2PP80 73 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 M0QZK8 103 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 GGCTO75223 188 aaKnown RBP10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 CRYGSP22914 178 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 DLL3Q9NYJ7 618 aa10.41□□□□□ -0.74
SHROOM3-208ENST00000486758 PIGBOS1A0A0B4J2F0 54 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 SPRY3O43610 288 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 OR5G3P0C626 314 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 LMO1P25800 156 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 ZNF83P51522 516 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 HIST3H3Q16695 136 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 HLA-DRB5Q30154 266 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 CEACAM21Q3KPI0 293 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 OR1L1Q8NH94 360 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 GALMQ96C23 342 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 SLC35D1Q9NTN3 355 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 LOC102723996A0A087X1L8 192 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 FOXI3A8MTJ6 420 aaPredicted RBP10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 C9orf172C9J069 976 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 ARL14EPLP0DKL9 152 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 RNASEKQ6P5S7 137 aaKnown RBP10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 DRAM1Q8N682 238 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 BEND2Q8NDZ0 799 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 OR4P4Q8NGL7 312 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 SFRP2Q96HF1 295 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 NEU1Q99519 415 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 HIPK2Q9H2X6 1198 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 TMEM106BQ9NUM4 274 aa10.4□□□□□ -0.74
SHROOM3-208ENST00000486758 IGHV3OR15-7A0A075B7D8 119 aa10.4□□□□□ -0.75
SHROOM3-208ENST00000486758 MARCH11A6NNE9 402 aa10.4□□□□□ -0.75
SHROOM3-208ENST00000486758 OR5A2Q8NGI9 324 aa10.4□□□□□ -0.75
SHROOM3-208ENST00000486758 POLDIP2Q9Y2S7 368 aa10.4□□□□□ -0.75
SHROOM3-208ENST00000486758 IGKV1-5P01602 117 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 SP1P08047 785 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 RANP62826 216 aaKnown RBP10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 DOLPP1Q86YN1 238 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 YPEL4Q96NS1 127 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 DCTN5Q9BTE1 182 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 TMEM250H0YL14 139 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 M0R1B8 84 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 SRP14P37108 136 aaKnown RBP10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 SRSF6Q13247 344 aaKnown RBP10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 C1orf194Q5T5A4 169 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 ASPHD1Q5U4P2 390 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 ZNF596Q8TC21 504 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 WDYHV1Q96HA8 205 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 ZNF703Q9H7S9 590 aaPredicted RBP10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 OR2H2O95918 312 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 OR10J4P0C629 311 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 RAB31Q13636 194 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 TIGITQ495A1 244 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 LEAP2Q969E1 77 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 LPAR2Q9HBW0 351 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 ZNF331Q9NQX6 463 aaPredicted RBP10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 TMEM242Q9NWH2 141 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 ZNF391Q9UJN7 358 aa10.39□□□□□ -0.75
SHROOM3-208ENST00000486758 YLPM1P49750 1951 aaKnown RBP10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 ODAMA1E959 279 aa10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 ZNF503-AS2A6NEH8 195 aa10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 NEURL1O76050 574 aa10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 ZFP36L1Q07352 338 aaKnown RBP10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 TGIF2LYQ8IUE0 185 aa10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 SGK494Q96LW2 274 aa10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 PSMG3Q9BT73 122 aaPredicted RBP10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 NPCDR1Q9BY65 106 aa10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 TECRQ9NZ01 308 aaKnown RBP10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 MT-CO2P00403 227 aa10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 MBD3L1Q8WWY6 194 aa10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 RNF115Q9Y4L5 304 aa10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 TBL2Q9Y4P3 447 aaKnown RBP10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 MAP1AP78559 2803 aaPredicted RBP10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 TLN1Q9Y490 2541 aaKnown RBP10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 APOA2P02652 100 aa10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 CD1BP29016 333 aa10.38□□□□□ -0.75
SHROOM3-208ENST00000486758 FBXW9Q5XUX1 488 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms