RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 SPTBN4Q9H254 2564 aa11.08□□□□□ -0.64
HMGN1-216ENST00000486741 SLC25A17O43808 307 aa11.07□□□□□ -0.64
HMGN1-216ENST00000486741 ASCL4Q6XD76 172 aa11.07□□□□□ -0.64
HMGN1-216ENST00000486741 RAB1CQ92928 201 aa11.07□□□□□ -0.64
HMGN1-216ENST00000486741 IDI2-AS1Q9NZ38 188 aa11.07□□□□□ -0.64
HMGN1-216ENST00000486741 PXMP4Q9Y6I8 212 aa11.07□□□□□ -0.64
HMGN1-216ENST00000486741 NDUFS6O75380 124 aaKnown RBP11.07□□□□□ -0.64
HMGN1-216ENST00000486741 IGLV3-1P01715 115 aa11.07□□□□□ -0.64
HMGN1-216ENST00000486741 KHDC3LQ587J8 217 aa11.07□□□□□ -0.64
HMGN1-216ENST00000486741 TEPPQ6URK8 271 aa11.07□□□□□ -0.64
HMGN1-216ENST00000486741 SSX7Q7RTT5 188 aa11.07□□□□□ -0.64
HMGN1-216ENST00000486741 SNRNP40Q96DI7 357 aaKnown RBP11.07□□□□□ -0.64
HMGN1-216ENST00000486741 RCC1LQ96I51 464 aaKnown RBP11.07□□□□□ -0.64
HMGN1-216ENST00000486741 SIRT7Q9NRC8 400 aa11.07□□□□□ -0.64
HMGN1-216ENST00000486741 PRRX1P54821 245 aa11.07□□□□□ -0.64
HMGN1-216ENST00000486741 TFF3Q07654 80 aa11.07□□□□□ -0.64
HMGN1-216ENST00000486741 Q6P435 159 aa11.07□□□□□ -0.64
HMGN1-216ENST00000486741 Q6ZRM9 215 aa11.07□□□□□ -0.64
HMGN1-216ENST00000486741 PRNDQ9UKY0 176 aa11.07□□□□□ -0.64
HMGN1-216ENST00000486741 ZNF343Q6P1L6 599 aa11.06□□□□□ -0.64
HMGN1-216ENST00000486741 WDR86Q86TI4 376 aa11.06□□□□□ -0.64
HMGN1-216ENST00000486741 IGHG3P01860 377 aa11.06□□□□□ -0.64
HMGN1-216ENST00000486741 TCL1AP56279 114 aa11.06□□□□□ -0.64
HMGN1-216ENST00000486741 ZNF146Q15072 292 aa11.06□□□□□ -0.64
HMGN1-216ENST00000486741 CD177Q8N6Q3 437 aa11.06□□□□□ -0.64
HMGN1-216ENST00000486741 NOTCH2Q04721 2471 aa11.06□□□□□ -0.64
HMGN1-216ENST00000486741 SCGB2A1O75556 95 aa11.06□□□□□ -0.64
HMGN1-216ENST00000486741 OR10J1P30954 320 aa11.06□□□□□ -0.64
HMGN1-216ENST00000486741 ERVFRD-1P60508 538 aa11.06□□□□□ -0.64
HMGN1-216ENST00000486741 ARF6P62330 175 aa11.06□□□□□ -0.64
HMGN1-216ENST00000486741 GCSAMQ8N6F7 178 aa11.06□□□□□ -0.64
HMGN1-216ENST00000486741 OR1B1Q8NGR6 318 aa11.06□□□□□ -0.64
HMGN1-216ENST00000486741 FKBP11Q9NYL4 201 aa11.06□□□□□ -0.64
HMGN1-216ENST00000486741 SLC25A15Q9Y619 301 aa11.06□□□□□ -0.64
HMGN1-216ENST00000486741 ANKRD11Q6UB99 2663 aaPredicted RBP11.06□□□□□ -0.64
HMGN1-216ENST00000486741 FGF16O43320 207 aa11.06□□□□□ -0.64
HMGN1-216ENST00000486741 TMPRSS3P57727 454 aa11.06□□□□□ -0.64
HMGN1-216ENST00000486741 PRR30Q53SZ7 412 aaPredicted RBP11.06□□□□□ -0.64
HMGN1-216ENST00000486741 WDR61Q9GZS3 305 aaKnown RBP11.06□□□□□ -0.64
HMGN1-216ENST00000486741 IL19Q9UHD0 177 aa11.06□□□□□ -0.64
HMGN1-216ENST00000486741 K7EM74 188 aa11.05□□□□□ -0.64
HMGN1-216ENST00000486741 NDUFB4O95168 129 aa11.05□□□□□ -0.64
HMGN1-216ENST00000486741 UBE2L3P68036 154 aaKnown RBP11.05□□□□□ -0.64
HMGN1-216ENST00000486741 MEF2BQ02080 365 aaPredicted RBP11.05□□□□□ -0.64
HMGN1-216ENST00000486741 WDR25Q64LD2 544 aaPredicted RBP11.05□□□□□ -0.64
HMGN1-216ENST00000486741 OR1L8Q8NGR8 309 aa11.05□□□□□ -0.64
HMGN1-216ENST00000486741 TMEM171Q8WVE6 324 aa11.05□□□□□ -0.64
HMGN1-216ENST00000486741 NPVFQ9HCQ7 196 aa11.05□□□□□ -0.64
HMGN1-216ENST00000486741 DNASE2O00115 360 aaPredicted RBP11.05□□□□□ -0.64
HMGN1-216ENST00000486741 IGKV1-5P01602 117 aa11.05□□□□□ -0.64
HMGN1-216ENST00000486741 BPIFB3P59826 476 aa11.05□□□□□ -0.64
HMGN1-216ENST00000486741 SPNS3Q6ZMD2 512 aa11.05□□□□□ -0.64
HMGN1-216ENST00000486741 MUC15Q8N387 334 aa11.05□□□□□ -0.64
HMGN1-216ENST00000486741 COQ2Q96H96 371 aa11.05□□□□□ -0.64
HMGN1-216ENST00000486741 PCGF1Q9BSM1 259 aa11.05□□□□□ -0.64
HMGN1-216ENST00000486741 FGF23Q9GZV9 251 aaPredicted RBP11.05□□□□□ -0.64
HMGN1-216ENST00000486741 VSIRQ9H7M9 311 aa11.05□□□□□ -0.64
HMGN1-216ENST00000486741 NAT8Q9UHE5 227 aa11.05□□□□□ -0.64
HMGN1-216ENST00000486741 CHD8Q9HCK8 2581 aa11.05□□□□□ -0.64
HMGN1-216ENST00000486741 LOC102724200A0A096LPH7 203 aaPredicted RBP11.05□□□□□ -0.64
HMGN1-216ENST00000486741 VAMP3Q15836 100 aa11.05□□□□□ -0.64
HMGN1-216ENST00000486741 LRTM2Q8N967 370 aa11.05□□□□□ -0.64
HMGN1-216ENST00000486741 OR8B3Q8NGG8 313 aa11.05□□□□□ -0.64
HMGN1-216ENST00000486741 OR8B2Q96RD0 313 aa11.05□□□□□ -0.64
HMGN1-216ENST00000486741 CXorf65A6NEN9 183 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 HSPE1P61604 102 aaKnown RBP11.04□□□□□ -0.64
HMGN1-216ENST00000486741 MMDQ15546 238 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 FAM157CP0CG43 387 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 LYZP61626 148 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 DOLPP1Q86YN1 238 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 VSTM2AQ8TAG5 236 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 TMEM106BQ9NUM4 274 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 MED12LQ86YW9 2145 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 C17orf100A8MU93 164 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 IGHV1-46P01743 117 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 SUMO1P63165 101 aaKnown RBP11.04□□□□□ -0.64
HMGN1-216ENST00000486741 MORN2Q502X0 79 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 PCSK4Q6UW60 755 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 FAM90A1Q86YD7 464 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 ZNF525Q8N782 197 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 RNF115Q9Y4L5 304 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 IGHV1-69-2A0A0G2JMI3 117 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 CEACAM18A8MTB9 384 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 FAM90A26D6RGX4 464 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 NMSQ5H8A3 153 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 Q6ZR03 302 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 DCAF16Q9NXF7 216 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 SLC45A2Q9UMX9 530 aa11.04□□□□□ -0.64
HMGN1-216ENST00000486741 KBTBD11-OT1A0A1B0GTJ5 212 aa11.03□□□□□ -0.64
HMGN1-216ENST00000486741 GATA2P23769 480 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-216ENST00000486741 ZNF124Q15973 351 aa11.03□□□□□ -0.64
HMGN1-216ENST00000486741 OR4X1Q8NH49 305 aa11.03□□□□□ -0.64
HMGN1-216ENST00000486741 SPRY4Q9C004 299 aa11.03□□□□□ -0.64
HMGN1-216ENST00000486741 IGKV3-15P01624 115 aa11.03□□□□□ -0.64
HMGN1-216ENST00000486741 RPL11P62913 178 aaKnown RBP11.03□□□□□ -0.64
HMGN1-216ENST00000486741 RPL8P62917 257 aaKnown RBP11.03□□□□□ -0.64
HMGN1-216ENST00000486741 Q6ZS92 163 aa11.03□□□□□ -0.64
HMGN1-216ENST00000486741 A0A1W2PN81 502 aa11.03□□□□□ -0.64
HMGN1-216ENST00000486741 SRRM5B3KS81 715 aa11.03□□□□□ -0.64
HMGN1-216ENST00000486741 NTF3P20783 257 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms