RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 A0A0J9YW62 118 aa1.85□□□□□ -2.11
SMC4-218ENST00000486711 TNNC2P02585 160 aa1.85□□□□□ -2.11
SMC4-218ENST00000486711 PSMB8P28062 276 aa1.85□□□□□ -2.11
SMC4-218ENST00000486711 RAB13P51153 203 aa1.85□□□□□ -2.11
SMC4-218ENST00000486711 NKX2-5P52952 324 aaPredicted RBP1.85□□□□□ -2.11
SMC4-218ENST00000486711 KRTAP12-1P59990 96 aa1.85□□□□□ -2.11
SMC4-218ENST00000486711 TMEM258P61165 79 aa1.85□□□□□ -2.11
SMC4-218ENST00000486711 GLO1Q04760 184 aa1.85□□□□□ -2.11
SMC4-218ENST00000486711 HIST2H3PS2Q5TEC6 136 aa1.85□□□□□ -2.11
SMC4-218ENST00000486711 LYZL1Q6UWQ5 148 aa1.85□□□□□ -2.11
SMC4-218ENST00000486711 ZNF705AQ6ZN79 300 aaPredicted RBP1.85□□□□□ -2.11
SMC4-218ENST00000486711 GPR32P1Q8NGA4 272 aa1.85□□□□□ -2.11
SMC4-218ENST00000486711 OR51T1Q8NGJ9 327 aa1.85□□□□□ -2.11
SMC4-218ENST00000486711 SLC7A6Q92536 515 aa1.85□□□□□ -2.11
SMC4-218ENST00000486711 OR51I1Q9H343 314 aa1.85□□□□□ -2.11
SMC4-218ENST00000486711 XAGE1AQ9HD64 81 aa1.85□□□□□ -2.11
SMC4-218ENST00000486711 ABCC12Q96J65 1359 aa1.85□□□□□ -2.11
SMC4-218ENST00000486711 PXDNLA1KZ92 1463 aa1.84□□□□□ -2.11
SMC4-218ENST00000486711 PLA2G10O15496 165 aa1.84□□□□□ -2.11
SMC4-218ENST00000486711 KCNE1P15382 129 aa1.84□□□□□ -2.11
SMC4-218ENST00000486711 TPI1P60174 286 aa1.84□□□□□ -2.11
SMC4-218ENST00000486711 RAB5BP61020 215 aa1.84□□□□□ -2.11
SMC4-218ENST00000486711 TNFAIP8L3Q5GJ75 292 aa1.84□□□□□ -2.11
SMC4-218ENST00000486711 DEFB125Q8N687 156 aa1.84□□□□□ -2.11
SMC4-218ENST00000486711 SGMS2Q8NHU3 365 aa1.84□□□□□ -2.11
SMC4-218ENST00000486711 TIMM21Q9BVV7 248 aa1.84□□□□□ -2.11
SMC4-218ENST00000486711 XPNPEP1Q9NQW7 623 aa1.84□□□□□ -2.11
SMC4-218ENST00000486711 ADCY9O60503 1353 aa1.84□□□□□ -2.12
SMC4-218ENST00000486711 ADAMTS7Q9UKP4 1686 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 KDM5BQ9UGL1 1544 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 ITGB4P16144 1822 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 TMSB15BA0A087X1C1 80 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 LST1O00453 97 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 CSN1S1P47710 185 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 TNFAIP6P98066 277 aaPredicted RBP1.83□□□□□ -2.12
SMC4-218ENST00000486711 HIST3H3Q16695 136 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 ACSM3Q53FZ2 586 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 PCOTHQ58A44 107 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 C9orf64Q5T6V5 341 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 GLT8D1Q68CQ7 371 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 SSX8Q7RTT4 187 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 LRRC28Q86X40 367 aaPredicted RBP1.83□□□□□ -2.12
SMC4-218ENST00000486711 OR51D1Q8NGF3 324 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 OR8B12Q8NGG6 310 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 OR1L8Q8NGR8 309 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 IMMP2LQ96T52 175 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 DOHHQ9BU89 302 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 RSL24D1Q9UHA3 163 aaKnown RBP1.83□□□□□ -2.12
SMC4-218ENST00000486711 ZNF532Q9HCE3 1301 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 DICER1Q9UPY3 1922 aaKnown RBP1.83□□□□□ -2.12
SMC4-218ENST00000486711 COL4A2P08572 1712 aa1.83□□□□□ -2.12
SMC4-218ENST00000486711 CHD5Q8TDI0 1954 aa1.82□□□□□ -2.12
SMC4-218ENST00000486711 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.82□□□□□ -2.12
SMC4-218ENST00000486711 A0A1B0GVG6 124 aa1.82□□□□□ -2.12
SMC4-218ENST00000486711 ZNF860A6NHJ4 632 aa1.82□□□□□ -2.12
SMC4-218ENST00000486711 SIGLEC16A6NMB1 481 aa1.82□□□□□ -2.12
SMC4-218ENST00000486711 I3L521 148 aa1.82□□□□□ -2.12
SMC4-218ENST00000486711 GPX1P07203 203 aa1.82□□□□□ -2.12
SMC4-218ENST00000486711 ZNF705DP0CH99 300 aaPredicted RBP1.82□□□□□ -2.12
SMC4-218ENST00000486711 HIST1H1EP10412 219 aaKnown RBP1.82□□□□□ -2.12
SMC4-218ENST00000486711 S100A7P31151 101 aa1.82□□□□□ -2.12
SMC4-218ENST00000486711 IDH3GP51553 393 aaPredicted RBP1.82□□□□□ -2.12
SMC4-218ENST00000486711 CEBPGP53567 150 aa1.82□□□□□ -2.12
SMC4-218ENST00000486711 OR4D2P58180 307 aa1.82□□□□□ -2.12
SMC4-218ENST00000486711 FAM201AQ5SY85 155 aa1.82□□□□□ -2.12
SMC4-218ENST00000486711 C8orf74Q6P047 294 aa1.82□□□□□ -2.12
SMC4-218ENST00000486711 SFXN4Q6P4A7 337 aa1.82□□□□□ -2.12
SMC4-218ENST00000486711 CNBD2Q96M20 576 aa1.82□□□□□ -2.12
SMC4-218ENST00000486711 RBM7Q9Y580 266 aaKnown RBP1.82□□□□□ -2.12
SMC4-218ENST00000486711 DSCAMO60469 2012 aa1.81□□□□□ -2.12
SMC4-218ENST00000486711 A8MUN3 132 aa1.81□□□□□ -2.12
SMC4-218ENST00000486711 H3BT86 120 aa1.81□□□□□ -2.12
SMC4-218ENST00000486711 NSA2O95478 260 aaKnown RBP1.81□□□□□ -2.12
SMC4-218ENST00000486711 SRP19P09132 144 aaKnown RBP1.81□□□□□ -2.12
SMC4-218ENST00000486711 MSNP26038 577 aaKnown RBP1.81□□□□□ -2.12
SMC4-218ENST00000486711 HIST1H4AP62805 103 aaKnown RBP1.81□□□□□ -2.12
SMC4-218ENST00000486711 SLC38A11Q08AI6 406 aa1.81□□□□□ -2.12
SMC4-218ENST00000486711 ITGB3BPQ13352 177 aaPredicted RBP1.81□□□□□ -2.12
SMC4-218ENST00000486711 PMAIP1Q13794 54 aa1.81□□□□□ -2.12
SMC4-218ENST00000486711 IMPG1Q17R60 797 aa1.81□□□□□ -2.12
SMC4-218ENST00000486711 ZNF791Q3KP31 576 aaPredicted RBP1.81□□□□□ -2.12
SMC4-218ENST00000486711 KTN1-AS1Q86SY8 53 aa1.81□□□□□ -2.12
SMC4-218ENST00000486711 ACOT12Q8WYK0 555 aa1.81□□□□□ -2.12
SMC4-218ENST00000486711 IMP4Q96G21 291 aaKnown RBP1.81□□□□□ -2.12
SMC4-218ENST00000486711 C8orf4Q9NR00 106 aa1.81□□□□□ -2.12
SMC4-218ENST00000486711 PAQR5Q9NXK6 330 aaPredicted RBP1.81□□□□□ -2.12
SMC4-218ENST00000486711 UBAP1Q9NZ09 502 aa1.81□□□□□ -2.12
SMC4-218ENST00000486711 NAT8Q9UHE5 227 aa1.81□□□□□ -2.12
SMC4-218ENST00000486711 DENND4BO75064 1496 aaPredicted RBP1.81□□□□□ -2.12
SMC4-218ENST00000486711 ATG2BQ96BY7 2078 aa1.81□□□□□ -2.12
SMC4-218ENST00000486711 VWDEQ8N2E2 1590 aa1.81□□□□□ -2.12
SMC4-218ENST00000486711 TRAV38-1A0A0B4J264 116 aa1.8□□□□□ -2.12
SMC4-218ENST00000486711 GOLGA6L19H0YKK7 550 aa1.8□□□□□ -2.12
SMC4-218ENST00000486711 H7C2G1 150 aa1.8□□□□□ -2.12
SMC4-218ENST00000486711 LGALS1P09382 135 aaKnown RBP1.8□□□□□ -2.12
SMC4-218ENST00000486711 TFPTP0C1Z6 253 aa1.8□□□□□ -2.12
SMC4-218ENST00000486711 OR5G3P0C626 314 aa1.8□□□□□ -2.12
SMC4-218ENST00000486711 RPL28P46779 137 aaKnown RBP1.8□□□□□ -2.12
SMC4-218ENST00000486711 SULT1A1P50225 295 aa1.8□□□□□ -2.12
SMC4-218ENST00000486711 SPCS3P61009 180 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms