RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 MGST2Q99735 147 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 ADAMTS20P59510 1910 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 C5orf49A4QMS7 147 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 TAX1BP3O14907 124 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 RAB29O14966 203 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 NEURL1O76050 574 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 NGFP01138 241 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 LINC00205P59089 165 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 CCL7P80098 99 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 TNXAQ16473 311 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 MPV17L2Q567V2 206 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 SPATA31B1PQ5VZV4 182 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 MRPL54Q6P161 138 aaKnown RBP8.87□□□□□ -0.99
CCDC171-208ENST00000486641 H2BFWTQ7Z2G1 175 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 DOLPP1Q86YN1 238 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 PRRG4Q9BZD6 226 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 SDK2Q58EX2 2172 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 TNRC6AQ8NDV7 1962 aaKnown RBP8.86□□□□□ -0.99
CCDC171-208ENST00000486641 TRIOO75962 3097 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 MYO9BQ13459 2157 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 AMY1AP04745 511 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 SELENOVP59797 346 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 EIF4EBP1Q13541 118 aaPredicted RBP8.86□□□□□ -0.99
CCDC171-208ENST00000486641 PDLIM3Q53GG5 364 aaPredicted RBP8.86□□□□□ -0.99
CCDC171-208ENST00000486641 Q6ZS52 159 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 CORO2AQ92828 525 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 C11orf52Q96A22 123 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 NCOR1P1Q9H4R4 102 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 SEPSECSQ9HD40 501 aaKnown RBP8.86□□□□□ -0.99
CCDC171-208ENST00000486641 CABIN1Q9Y6J0 2220 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 TNRC6BQ9UPQ9 1833 aaKnown RBP8.86□□□□□ -0.99
CCDC171-208ENST00000486641 LOC102724200A0A096LPH7 203 aaPredicted RBP8.86□□□□□ -0.99
CCDC171-208ENST00000486641 FAM181BA6NEQ2 426 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 OR2T8A6NH00 312 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 CXCL13O43927 109 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 APCSP02743 223 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 GABRA2P47869 451 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 CLDN18P56856 261 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 RPS20P60866 119 aaKnown RBP8.86□□□□□ -0.99
CCDC171-208ENST00000486641 C9orf135Q5VTT2 229 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 OR4A47Q6IF82 309 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 PQLC2Q6ZP29 291 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 MOB1BQ7L9L4 216 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 SPATA12Q7Z6I5 190 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 YRDCQ86U90 279 aaKnown RBP8.86□□□□□ -0.99
CCDC171-208ENST00000486641 KMT2EQ8IZD2 1858 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 ZNF596Q8TC21 504 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 C18orf32Q8TCD1 76 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 ST6GALNAC6Q969X2 333 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 GGTLC1Q9BX51 225 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 MS4A5Q9H3V2 200 aa8.86□□□□□ -0.99
CCDC171-208ENST00000486641 AKIRIN1Q9H9L7 192 aaPredicted RBP8.86□□□□□ -0.99
CCDC171-208ENST00000486641 A0A096LPE4 126 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 A0A1W2PPZ6 126 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 HELTA6NFD8 242 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 TMEM238C9JI98 176 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 MPDU1O75352 247 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 SCRG1O75711 98 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 OR2H2O95918 312 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 HLA-DQA1P01909 254 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 OR10J4P0C629 311 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 GNG4P50150 75 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 SLAQ13239 276 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 TBR1Q16650 682 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 COX19Q49B96 90 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 CENPWQ5EE01 88 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 AMMECR1LQ6DCA0 310 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 SCCPDHQ8NBX0 429 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 OR8B3Q8NGG8 313 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 SSMEM1Q8WWF3 244 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 OR8B2Q96RD0 313 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 USF3Q68DE3 2245 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 EYSQ5T1H1 3165 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 GJE1A6NN92 205 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 CDIPTO14735 213 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 WISP2O76076 250 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 LINC00869P0C866 280 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 TMEM11P17152 192 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 OTX2P32243 289 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 B3GALT5-AS1P59052 145 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 GGNQ86UU5 652 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 SLC24A4Q8NFF2 622 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 BCL2L2Q92843 193 aaPredicted RBP8.85□□□□□ -0.99
CCDC171-208ENST00000486641 NUDT11Q96G61 164 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 POM121L2Q96KW2 1035 aa8.85□□□□□ -0.99
CCDC171-208ENST00000486641 MBNL3Q9NUK0 354 aaKnown RBP8.85□□□□□ -0.99
CCDC171-208ENST00000486641 C2orf70A6NJV1 201 aa8.84□□□□□ -0.99
CCDC171-208ENST00000486641 M0R2Z0 102 aa8.84□□□□□ -0.99
CCDC171-208ENST00000486641 CGAP01215 116 aa8.84□□□□□ -0.99
CCDC171-208ENST00000486641 CRYBB3P26998 211 aa8.84□□□□□ -0.99
CCDC171-208ENST00000486641 HYAL1Q12794 435 aa8.84□□□□□ -0.99
CCDC171-208ENST00000486641 EFNB3Q15768 340 aa8.84□□□□□ -0.99
CCDC171-208ENST00000486641 KIR3DL3Q8N743 410 aa8.84□□□□□ -0.99
CCDC171-208ENST00000486641 ZBTB34Q8NCN2 500 aa8.84□□□□□ -0.99
CCDC171-208ENST00000486641 OR52L2PQ8NGH6 319 aa8.84□□□□□ -0.99
CCDC171-208ENST00000486641 C1orf159Q96HA4 380 aa8.84□□□□□ -0.99
CCDC171-208ENST00000486641 OSTCQ9NRP0 149 aa8.84□□□□□ -0.99
CCDC171-208ENST00000486641 WASHC3Q9Y3C0 194 aa8.84□□□□□ -0.99
CCDC171-208ENST00000486641 SMIM27A0A1W2PRY6 76 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 ZNF503-AS2A6NEH8 195 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms