RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 H7C2G1 150 aa1.03□□□□□ -2.24
LTN1-206ENST00000486427 REG1AP05451 166 aa1.03□□□□□ -2.24
LTN1-206ENST00000486427 COX5BP10606 129 aa1.03□□□□□ -2.24
LTN1-206ENST00000486427 CASQ1P31415 396 aa1.03□□□□□ -2.24
LTN1-206ENST00000486427 RPL28P46779 137 aaKnown RBP1.03□□□□□ -2.24
LTN1-206ENST00000486427 RAB14P61106 215 aa1.03□□□□□ -2.24
LTN1-206ENST00000486427 TNFAIP6P98066 277 aaPredicted RBP1.03□□□□□ -2.24
LTN1-206ENST00000486427 AKR1C1Q04828 323 aa1.03□□□□□ -2.24
LTN1-206ENST00000486427 PPP1R1AQ13522 171 aa1.03□□□□□ -2.24
LTN1-206ENST00000486427 CMTM5Q96DZ9 223 aa1.03□□□□□ -2.24
LTN1-206ENST00000486427 Q96M85 177 aa1.03□□□□□ -2.24
LTN1-206ENST00000486427 XAGE1AQ9HD64 81 aa1.03□□□□□ -2.24
LTN1-206ENST00000486427 DKKL1Q9UK85 242 aa1.03□□□□□ -2.24
LTN1-206ENST00000486427 TIMM9Q9Y5J7 89 aa1.03□□□□□ -2.24
LTN1-206ENST00000486427 SCAF11Q99590 1463 aaKnown RBP1.03□□□□□ -2.24
LTN1-206ENST00000486427 MALRD1Q5VYJ5 2156 aa1.03□□□□□ -2.25
LTN1-206ENST00000486427 A0A0D9SEW6 157 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 TRBV6-5A0A0K0K1A5 114 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 COL6A6A6NMZ7 2263 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 HMSDA8MTL9 139 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 F8W036 122 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 H3BT86 120 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 PLA2G10O15496 165 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 TYMSP04818 313 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 DEFA4P12838 97 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 PTPRBP23467 1997 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 FLT4P35916 1363 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 AKR1C3P42330 323 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 SMARCA4P51532 1647 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 AQP4P55087 323 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 PRB3Q04118 309 aaPredicted RBP1.02□□□□□ -2.25
LTN1-206ENST00000486427 MLLT11Q13015 90 aaPredicted RBP1.02□□□□□ -2.25
LTN1-206ENST00000486427 SLC36A2Q495M3 483 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 C5orf46Q6UWT4 87 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 ZNF705AQ6ZN79 300 aaPredicted RBP1.02□□□□□ -2.25
LTN1-206ENST00000486427 CPAMD8Q8IZJ3 1885 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 SLC22A24Q8N4F4 322 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 TMA16Q96EY4 203 aaKnown RBP1.02□□□□□ -2.25
LTN1-206ENST00000486427 ABCC11Q96J66 1382 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 MAP1LC3AQ9H492 121 aa1.02□□□□□ -2.25
LTN1-206ENST00000486427 PTPRSQ13332 1948 aa1.01□□□□□ -2.25
LTN1-206ENST00000486427 TRAV38-1A0A0B4J264 116 aa1.01□□□□□ -2.25
LTN1-206ENST00000486427 TMEM269A0A1B0GVZ9 245 aa1.01□□□□□ -2.25
LTN1-206ENST00000486427 DISC1C4P0D8 188 aa1.01□□□□□ -2.25
LTN1-206ENST00000486427 LST1O00453 97 aa1.01□□□□□ -2.25
LTN1-206ENST00000486427 SSNA1O43805 119 aa1.01□□□□□ -2.25
LTN1-206ENST00000486427 CREBL2O60519 120 aaPredicted RBP1.01□□□□□ -2.25
LTN1-206ENST00000486427 NSA2O95478 260 aaKnown RBP1.01□□□□□ -2.25
LTN1-206ENST00000486427 YEATS4O95619 227 aa1.01□□□□□ -2.25
LTN1-206ENST00000486427 TFPTP0C1Z6 253 aa1.01□□□□□ -2.25
LTN1-206ENST00000486427 NNATQ16517 81 aa1.01□□□□□ -2.25
LTN1-206ENST00000486427 TNFAIP8L3Q5GJ75 292 aa1.01□□□□□ -2.25
LTN1-206ENST00000486427 SLC36A1Q7Z2H8 476 aa1.01□□□□□ -2.25
LTN1-206ENST00000486427 CHST6Q9GZX3 395 aa1.01□□□□□ -2.25
LTN1-206ENST00000486427 HDHD2Q9H0R4 259 aa1.01□□□□□ -2.25
LTN1-206ENST00000486427 GPR84Q9NQS5 396 aa1.01□□□□□ -2.25
LTN1-206ENST00000486427 C15orf41Q9Y2V0 281 aa1.01□□□□□ -2.25
LTN1-206ENST00000486427 A0A0A6YYH2 397 aa1□□□□□ -2.25
LTN1-206ENST00000486427 IGHV1-69-2A0A0G2JMI3 117 aa1□□□□□ -2.25
LTN1-206ENST00000486427 OR51F1A6NGY5 319 aa1□□□□□ -2.25
LTN1-206ENST00000486427 A6NJ64 397 aa1□□□□□ -2.25
LTN1-206ENST00000486427 OR4C45A6NMZ5 311 aa1□□□□□ -2.25
LTN1-206ENST00000486427 PFDN6O15212 129 aa1□□□□□ -2.25
LTN1-206ENST00000486427 RPL12P30050 165 aaKnown RBP1□□□□□ -2.25
LTN1-206ENST00000486427 HIST1H4AP62805 103 aaKnown RBP1□□□□□ -2.25
LTN1-206ENST00000486427 RPL30P62888 115 aaKnown RBP1□□□□□ -2.25
LTN1-206ENST00000486427 MOGQ16653 247 aa1□□□□□ -2.25
LTN1-206ENST00000486427 UNQ6190/PRO20217Q6UXQ8 127 aa1□□□□□ -2.25
LTN1-206ENST00000486427 C7orf65Q6ZTY9 151 aa1□□□□□ -2.25
LTN1-206ENST00000486427 FP248Q71RG6 208 aaPredicted RBP1□□□□□ -2.25
LTN1-206ENST00000486427 SSX8Q7RTT4 187 aa1□□□□□ -2.25
LTN1-206ENST00000486427 ZNF550Q7Z398 422 aa1□□□□□ -2.25
LTN1-206ENST00000486427 COMMD7Q86VX2 200 aa1□□□□□ -2.25
LTN1-206ENST00000486427 RPP25LQ8N5L8 163 aaKnown RBP1□□□□□ -2.25
LTN1-206ENST00000486427 C10orf105Q8TEF2 133 aa1□□□□□ -2.25
LTN1-206ENST00000486427 MBD3L1Q8WWY6 194 aa1□□□□□ -2.25
LTN1-206ENST00000486427 OR51I2Q9H344 312 aa1□□□□□ -2.25
LTN1-206ENST00000486427 CXorf21Q9HAI6 301 aa1□□□□□ -2.25
LTN1-206ENST00000486427 AK3Q9UIJ7 227 aa1□□□□□ -2.25
LTN1-206ENST00000486427 PXMP4Q9Y6I8 212 aa1□□□□□ -2.25
LTN1-206ENST00000486427 RTTNQ86VV8 2226 aa0.99□□□□□ -2.25
LTN1-206ENST00000486427 TRAPPC2LH3BP13 241 aa0.99□□□□□ -2.25
LTN1-206ENST00000486427 CXCR6O00574 342 aa0.99□□□□□ -2.25
LTN1-206ENST00000486427 PPBPP02775 128 aa0.99□□□□□ -2.25
LTN1-206ENST00000486427 MSMBP08118 114 aa0.99□□□□□ -2.25
LTN1-206ENST00000486427 MAP3K7CLP57077 242 aa0.99□□□□□ -2.25
LTN1-206ENST00000486427 Q1T7F1 81 aa0.99□□□□□ -2.25
LTN1-206ENST00000486427 ARHGAP11BQ3KRB8 267 aa0.99□□□□□ -2.25
LTN1-206ENST00000486427 FAM151BQ6UXP7 276 aa0.99□□□□□ -2.25
LTN1-206ENST00000486427 SLC51BQ86UW2 128 aa0.99□□□□□ -2.25
LTN1-206ENST00000486427 C9orf163Q8N9P6 203 aa0.99□□□□□ -2.25
LTN1-206ENST00000486427 LLPHQ9BRT6 129 aaKnown RBP0.99□□□□□ -2.25
LTN1-206ENST00000486427 CST9LQ9H4G1 147 aa0.99□□□□□ -2.25
LTN1-206ENST00000486427 ANGPT4Q9Y264 503 aa0.99□□□□□ -2.25
LTN1-206ENST00000486427 TRAPPC13A5PLN9 417 aa0.98□□□□□ -2.25
LTN1-206ENST00000486427 MEIS3P1A6NDR6 274 aa0.98□□□□□ -2.25
LTN1-206ENST00000486427 LEPROTO15243 131 aa0.98□□□□□ -2.25
LTN1-206ENST00000486427 MRPS14O60783 128 aaKnown RBP0.98□□□□□ -2.25
LTN1-206ENST00000486427 CRPP02741 224 aa0.98□□□□□ -2.25
LTN1-206ENST00000486427 MSNP26038 577 aaKnown RBP0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms