RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 MYOD1P15172 320 aa13.57□□□□□ -0.24
COL6A1-204ENST00000486023 ELK1P19419 428 aa13.57□□□□□ -0.24
COL6A1-204ENST00000486023 RHOGP84095 191 aa13.57□□□□□ -0.24
COL6A1-204ENST00000486023 ACSM6Q6P461 480 aa13.57□□□□□ -0.24
COL6A1-204ENST00000486023 C19orf35Q6ZS72 473 aa13.57□□□□□ -0.24
COL6A1-204ENST00000486023 ZBTB34Q8NCN2 500 aa13.57□□□□□ -0.24
COL6A1-204ENST00000486023 ASCL2Q99929 193 aa13.57□□□□□ -0.24
COL6A1-204ENST00000486023 ELOVL1Q9BW60 279 aa13.57□□□□□ -0.24
COL6A1-204ENST00000486023 OR2J3O76001 311 aa13.56□□□□□ -0.24
COL6A1-204ENST00000486023 APOA1P02647 267 aa13.56□□□□□ -0.24
COL6A1-204ENST00000486023 SPNP16150 400 aa13.56□□□□□ -0.24
COL6A1-204ENST00000486023 ZP3P21754 424 aa13.56□□□□□ -0.24
COL6A1-204ENST00000486023 RPL27AP46776 148 aaKnown RBP13.56□□□□□ -0.24
COL6A1-204ENST00000486023 SYNJ2BPP57105 145 aa13.56□□□□□ -0.24
COL6A1-204ENST00000486023 TSPAN5P62079 268 aa13.56□□□□□ -0.24
COL6A1-204ENST00000486023 ATP5G2Q06055 141 aa13.56□□□□□ -0.24
COL6A1-204ENST00000486023 DCTN2Q13561 401 aaKnown RBP13.56□□□□□ -0.24
COL6A1-204ENST00000486023 DYRK1AQ13627 763 aa13.56□□□□□ -0.24
COL6A1-204ENST00000486023 TMEM167AQ8TBQ9 72 aa13.56□□□□□ -0.24
COL6A1-204ENST00000486023 USMG5Q96IX5 58 aa13.56□□□□□ -0.24
COL6A1-204ENST00000486023 B9D2Q9BPU9 175 aa13.56□□□□□ -0.24
COL6A1-204ENST00000486023 AKIP1Q9NQ31 210 aa13.56□□□□□ -0.24
COL6A1-204ENST00000486023 ADAM30Q9UKF2 790 aa13.56□□□□□ -0.24
COL6A1-204ENST00000486023 E7EUB6 86 aa13.55□□□□□ -0.24
COL6A1-204ENST00000486023 IL6RP08887 468 aaPredicted RBP13.55□□□□□ -0.24
COL6A1-204ENST00000486023 GNRHRP30968 328 aa13.55□□□□□ -0.24
COL6A1-204ENST00000486023 HRH1P35367 487 aa13.55□□□□□ -0.24
COL6A1-204ENST00000486023 TAS2R46P59540 309 aa13.55□□□□□ -0.24
COL6A1-204ENST00000486023 OR4A47Q6IF82 309 aa13.55□□□□□ -0.24
COL6A1-204ENST00000486023 MZT2AQ6P582 158 aa13.55□□□□□ -0.24
COL6A1-204ENST00000486023 ANKRD13BQ86YJ7 626 aa13.55□□□□□ -0.24
COL6A1-204ENST00000486023 LYSMD2Q8IV50 215 aa13.55□□□□□ -0.24
COL6A1-204ENST00000486023 PUSL1Q8N0Z8 303 aaKnown RBP13.55□□□□□ -0.24
COL6A1-204ENST00000486023 DMBX1Q8NFW5 382 aa13.55□□□□□ -0.24
COL6A1-204ENST00000486023 OR6F1Q8NGZ6 308 aa13.55□□□□□ -0.24
COL6A1-204ENST00000486023 LSM4Q9Y4Z0 139 aaKnown RBP13.55□□□□□ -0.24
COL6A1-204ENST00000486023 HPRT1P00492 218 aa13.54□□□□□ -0.24
COL6A1-204ENST00000486023 IGHV3-23P01764 117 aa13.54□□□□□ -0.24
COL6A1-204ENST00000486023 RLN1P04808 185 aa13.54□□□□□ -0.24
COL6A1-204ENST00000486023 REG1AP05451 166 aa13.54□□□□□ -0.24
COL6A1-204ENST00000486023 RPL8P62917 257 aaKnown RBP13.54□□□□□ -0.24
COL6A1-204ENST00000486023 ZNF45Q02386 682 aa13.54□□□□□ -0.24
COL6A1-204ENST00000486023 EXOSC2Q13868 293 aaKnown RBP13.54□□□□□ -0.24
COL6A1-204ENST00000486023 MSMO1Q15800 293 aa13.54□□□□□ -0.24
COL6A1-204ENST00000486023 RPEL1Q2QD12 228 aa13.54□□□□□ -0.24
COL6A1-204ENST00000486023 VAX1Q5SQQ9 334 aa13.54□□□□□ -0.24
COL6A1-204ENST00000486023 ZNF343Q6P1L6 599 aa13.54□□□□□ -0.24
COL6A1-204ENST00000486023 DHRS11Q6UWP2 260 aa13.54□□□□□ -0.24
COL6A1-204ENST00000486023 SLC25A42Q86VD7 318 aa13.54□□□□□ -0.24
COL6A1-204ENST00000486023 TTC9CQ8N5M4 171 aa13.54□□□□□ -0.24
COL6A1-204ENST00000486023 OR6Q1Q8NGQ2 317 aa13.54□□□□□ -0.24
COL6A1-204ENST00000486023 AIFM2Q9BRQ8 373 aa13.54□□□□□ -0.24
COL6A1-204ENST00000486023 S4R3C0 116 aa13.54□□□□□ -0.24
COL6A1-204ENST00000486023 TRAV3A0A0B4J244 114 aa13.53□□□□□ -0.24
COL6A1-204ENST00000486023 TEX22C9J3V5 150 aa13.53□□□□□ -0.24
COL6A1-204ENST00000486023 PGLYRP1O75594 196 aaPredicted RBP13.53□□□□□ -0.24
COL6A1-204ENST00000486023 S1PR2O95136 353 aa13.53□□□□□ -0.24
COL6A1-204ENST00000486023 GP9P14770 177 aa13.53□□□□□ -0.24
COL6A1-204ENST00000486023 AREGP15514 252 aa13.53□□□□□ -0.24
COL6A1-204ENST00000486023 HLA-GP17693 338 aa13.53□□□□□ -0.24
COL6A1-204ENST00000486023 MAS1LP35410 378 aa13.53□□□□□ -0.24
COL6A1-204ENST00000486023 CTF1Q16619 201 aa13.53□□□□□ -0.24
COL6A1-204ENST00000486023 TATDN3Q17R31 274 aa13.53□□□□□ -0.24
COL6A1-204ENST00000486023 PHLDA2Q53GA4 152 aa13.53□□□□□ -0.24
COL6A1-204ENST00000486023 GPR141Q7Z602 305 aa13.53□□□□□ -0.24
COL6A1-204ENST00000486023 GPX8Q8TED1 209 aa13.53□□□□□ -0.24
COL6A1-204ENST00000486023 BORCS5Q969J3 196 aa13.53□□□□□ -0.24
COL6A1-204ENST00000486023 MOB3AQ96BX8 217 aa13.53□□□□□ -0.24
COL6A1-204ENST00000486023 MRPS26Q9BYN8 205 aaKnown RBP13.53□□□□□ -0.24
COL6A1-204ENST00000486023 FBXL7Q9UJT9 491 aa13.53□□□□□ -0.24
COL6A1-204ENST00000486023 FAM223BA6NKX1 122 aa13.52□□□□□ -0.25
COL6A1-204ENST00000486023 GABARAPO95166 117 aa13.52□□□□□ -0.25
COL6A1-204ENST00000486023 BRI3O95415 125 aa13.52□□□□□ -0.25
COL6A1-204ENST00000486023 DEFA4P12838 97 aa13.52□□□□□ -0.25
COL6A1-204ENST00000486023 NQO2P16083 231 aa13.52□□□□□ -0.25
COL6A1-204ENST00000486023 ZNF182P17025 639 aaPredicted RBP13.52□□□□□ -0.25
COL6A1-204ENST00000486023 NAT1P18440 290 aa13.52□□□□□ -0.25
COL6A1-204ENST00000486023 LPAR6P43657 344 aa13.52□□□□□ -0.25
COL6A1-204ENST00000486023 TAS2R31P59538 309 aa13.52□□□□□ -0.25
COL6A1-204ENST00000486023 KLF5Q13887 457 aaPredicted RBP13.52□□□□□ -0.25
COL6A1-204ENST00000486023 C15orf32Q32M92 178 aa13.52□□□□□ -0.25
COL6A1-204ENST00000486023 FAM223AQ8IWN6 122 aa13.52□□□□□ -0.25
COL6A1-204ENST00000486023 CMTM1Q8IZ96 169 aa13.52□□□□□ -0.25
COL6A1-204ENST00000486023 OR9G4Q8NGQ1 327 aa13.52□□□□□ -0.25
COL6A1-204ENST00000486023 AP3S1Q92572 193 aa13.52□□□□□ -0.25
COL6A1-204ENST00000486023 CMTM3Q96MX0 182 aa13.52□□□□□ -0.25
COL6A1-204ENST00000486023 SLC2A9Q9NRM0 540 aa13.52□□□□□ -0.25
COL6A1-204ENST00000486023 TMEM140Q9NV12 185 aa13.52□□□□□ -0.25
COL6A1-204ENST00000486023 ANAPC10Q9UM13 185 aa13.52□□□□□ -0.25
COL6A1-204ENST00000486023 SMAD5-AS1Q9Y6J3 95 aa13.52□□□□□ -0.25
COL6A1-204ENST00000486023 A0A1B0GW64 132 aa13.51□□□□□ -0.25
COL6A1-204ENST00000486023 UPK2O00526 184 aa13.51□□□□□ -0.25
COL6A1-204ENST00000486023 RBFOX2O43251 390 aaKnown RBP eCLIP13.51□□□□□ -0.25
COL6A1-204ENST00000486023 ZNF735P0CB33 412 aa13.51□□□□□ -0.25
COL6A1-204ENST00000486023 ERVK-16P61578 105 aa13.51□□□□□ -0.25
COL6A1-204ENST00000486023 NECAP1Q8NC96 275 aa13.51□□□□□ -0.25
COL6A1-204ENST00000486023 OR4A5Q8NH83 315 aa13.51□□□□□ -0.25
COL6A1-204ENST00000486023 CD300LFQ8TDQ1 290 aa13.51□□□□□ -0.25
COL6A1-204ENST00000486023 COMMD5Q9GZQ3 224 aa13.51□□□□□ -0.25
COL6A1-204ENST00000486023 FXYD6Q9H0Q3 95 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms