RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 KCTD9Q7L273 389 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 LYSMD2Q8IV50 215 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 ADAD2Q8NCV1 583 aaKnown RBP5.39□□□□□ -1.55
VPS50-218ENST00000485994 OR5T1Q8NG75 326 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 OR4S2Q8NH73 311 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 GPX8Q8TED1 209 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 ABHD5Q8WTS1 349 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 SRSF12Q8WXF0 261 aaKnown RBP5.39□□□□□ -1.55
VPS50-218ENST00000485994 SNAPC3Q92966 411 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 OR2A7Q96R45 310 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 KRTAP4-11Q9BYQ6 195 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 ZNF430Q9H8G1 570 aaPredicted RBP5.39□□□□□ -1.55
VPS50-218ENST00000485994 SCPEP1Q9HB40 452 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 CCL28Q9NRJ3 127 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 FAM212BQ9NTI7 297 aaPredicted RBP5.39□□□□□ -1.55
VPS50-218ENST00000485994 BET1LQ9NYM9 111 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 SIGLEC8Q9NYZ4 499 aa5.39□□□□□ -1.55
VPS50-218ENST00000485994 IGHV4OR15-8A0A075B7B6 117 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 A0A087WW49 117 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 C13orf42A0A1B0GVH6 325 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 FAM223BA6NKX1 122 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 F8W735 103 aaPredicted RBP5.38□□□□□ -1.55
VPS50-218ENST00000485994 KBTBD11O94819 623 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 GABARAPO95166 117 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 CRYGCP07315 174 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 ZNF735P0CB33 412 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 ZNF182P17025 639 aaPredicted RBP5.38□□□□□ -1.55
VPS50-218ENST00000485994 UCP3P55916 312 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 RAB25P57735 213 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 TPPP2P59282 170 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 TAS2R31P59538 309 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 TAS2R46P59540 309 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 VBP1P61758 197 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 NCS1P62166 190 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 LSM3P62310 102 aaKnown RBP5.38□□□□□ -1.55
VPS50-218ENST00000485994 CATR1Q13166 79 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 TNXAQ16473 311 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 TATDN3Q17R31 274 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 TMEM69Q5SWH9 247 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 LPCAT3Q6P1A2 487 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 FAM223AQ8IWN6 122 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 SAMD12Q8N8I0 201 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 GRPEL2Q8TAA5 225 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 C15orf40Q8WUR7 153 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 TCTEX1D2Q8WW35 142 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 MS4A10Q96PG2 267 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 SRSF8Q9BRL6 282 aaKnown RBP5.38□□□□□ -1.55
VPS50-218ENST00000485994 DCUN1D5Q9BTE7 237 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 SLC5A7Q9GZV3 580 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 ALX4Q9H161 411 aaPredicted RBP5.38□□□□□ -1.55
VPS50-218ENST00000485994 PLEKHA2Q9HB19 425 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 SLC2A9Q9NRM0 540 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 PEF1Q9UBV8 284 aaKnown RBP5.38□□□□□ -1.55
VPS50-218ENST00000485994 ZNF256Q9Y2P7 627 aaPredicted RBP5.38□□□□□ -1.55
VPS50-218ENST00000485994 A3GALT2U3KPV4 340 aa5.38□□□□□ -1.55
VPS50-218ENST00000485994 NPIPB5A8MRT5 1133 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 TEX22C9J3V5 150 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 J3QRK9 145 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 ACTL6BO94805 426 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 PTHLHP12272 177 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 NQO2P16083 231 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 RPL5P46777 297 aaKnown RBP5.37□□□□□ -1.55
VPS50-218ENST00000485994 RFX2P48378 723 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 MECP2P51608 486 aaKnown RBP5.37□□□□□ -1.55
VPS50-218ENST00000485994 SLURP1P55000 103 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 RPL8P62917 257 aaKnown RBP5.37□□□□□ -1.55
VPS50-218ENST00000485994 GPR107Q5VW38 600 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 MZT2AQ6P582 158 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 IL34Q6ZMJ4 242 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 ZNF818PQ6ZRF7 136 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 SPAG16Q8N0X2 631 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 NECAP1Q8NC96 275 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 OR6Q1Q8NGQ2 317 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 OR6F1Q8NGZ6 308 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 SECTM1Q8WVN6 248 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 MOB3AQ96BX8 217 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 OR5B12Q96R08 314 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 BCL7BQ9BQE9 202 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 ELOVL1Q9BW60 279 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 RBM38Q9H0Z9 239 aaKnown RBP5.37□□□□□ -1.55
VPS50-218ENST00000485994 IFT46Q9NQC8 304 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 ZNF355PQ9NSJ1 428 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 COMMD3Q9UBI1 195 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 ZNF257Q9Y2Q1 563 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 CEPT1Q9Y6K0 416 aa5.37□□□□□ -1.55
VPS50-218ENST00000485994 TENM3Q9P273 2699 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.36□□□□□ -1.55
VPS50-218ENST00000485994 A8MZ25 164 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 E7EUB6 86 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 GPR31O00270 319 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 UPK2O00526 184 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 SAP30O75446 220 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 PGLYRP1O75594 196 aaPredicted RBP5.36□□□□□ -1.55
VPS50-218ENST00000485994 DHFRP00374 187 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 IGLV1-51P01701 117 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 IGHV3-11P01762 117 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 EIF4EP06730 217 aaKnown RBP5.36□□□□□ -1.55
VPS50-218ENST00000485994 HIST1H1BP16401 226 aaKnown RBP5.36□□□□□ -1.55
VPS50-218ENST00000485994 CTRB1P17538 263 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 ELK1P19419 428 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms