RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 IFT22Q9H7X7 185 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 CBLN4Q9NTU7 201 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 INTS1Q8N201 2190 aaKnown RBP9□□□□□ -0.97
SRGAP3-207ENST00000485983 NPIPB4C9JG80 1138 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 DNLZQ5SXM8 178 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 GTSCR1Q86UQ5 136 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 TMEM54Q969K7 222 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 GPR61Q9BZJ8 451 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 V9GYH0 126 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 ZDBF2Q9HCK1 2354 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 SCN1AP35498 2009 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 IGHV3-66A0A0C4DH42 116 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 TRBV5-5A0A0J9YX44 114 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 FBLL1A6NHQ2 334 aaKnown RBP8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 TIAF1O95411 115 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 MOSP00540 346 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 IGF2P01344 180 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 RPLP1P05386 114 aaKnown RBP8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 MEF2CQ06413 473 aaPredicted RBP8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 GPR132Q9UNW8 380 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 LAMB2P55268 1798 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 TRAV20A0A0B4J274 112 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 TCRBV4S1A1TA0A5B7 111 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 C7orf66A4D0T2 115 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 GPR183P32249 361 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 C1orf100Q5SVJ3 147 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 ZNF385CQ66K41 422 aaPredicted RBP8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 VKORC1L1Q8N0U8 176 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 CYB561D1Q8N8Q1 229 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 OR13A1Q8NGR1 328 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 VGLL1Q99990 258 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 KCNE5Q9UJ90 142 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 NUP214P35658 2090 aaPredicted RBP8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 IGHV3-48P01763 117 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 CA7P43166 264 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 DSCR9P59020 149 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 NUDT10Q8NFP7 164 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 OR10AG1Q8NH19 301 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 ZNF638Q14966 1978 aaKnown RBP8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 A0A087X0M5 115 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 A0A1B0GX30 115 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 H3BRM9 83 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 AMELYQ99218 206 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 MRPL13Q9BYD1 178 aaKnown RBP8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 FAM206AQ9NX38 181 aa8.99□□□□□ -0.97
SRGAP3-207ENST00000485983 CRYBB3P26998 211 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 LIMS1P48059 325 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 ICAM4Q14773 271 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 CLEC19AQ6UXS0 136 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 ACP7Q6ZNF0 438 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 C10orf111Q8N326 155 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 MARVELD3Q96A59 401 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 LOC390937A0A1W2PQ73 354 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 TMEM250H0YL14 139 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 M0R381 172 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 ARL14EPLP0DKL9 152 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 CRYBA2P53672 197 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 LY6DQ14210 128 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 IRF3Q14653 427 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 UBE2V2Q15819 145 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 LINC00305Q7Z4B0 112 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 DTX2Q86UW9 622 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 OR4D5Q8NGN0 318 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 TRIP11Q15643 1979 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 ZNF831Q5JPB2 1677 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 C17orf100A8MU93 164 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 RFPL3SP0C7P2 107 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 MALP21145 153 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 RGP1Q92546 391 aaPredicted RBP8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 RPRMQ9NS64 109 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 TOMM7Q9P0U1 55 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 SOX21Q9Y651 276 aaPredicted RBP8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 GHRHP01286 108 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 IGHV3-11P01762 117 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 FABP2P12104 132 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 FAM209BQ5JX69 171 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 CYP2G1PQ6ZSU1 146 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 DRAM1Q8N682 238 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 Q96M66 194 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 FOXA2Q9Y261 457 aaPredicted RBP8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 IGHV2OR16-5A0A0B4J2B6 119 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 NPBWR2P48146 333 aa8.98□□□□□ -0.97
SRGAP3-207ENST00000485983 TRAV24A0A0B4J272 114 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 SMIM10L1P0DMW3 83 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 PAX1P15863 534 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 RPS11P62280 158 aaKnown RBP eCLIP8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 TMEM170BQ5T4T1 132 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 LEMD1Q68G75 181 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 TMEM105Q8N8V8 129 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 SMIM10Q96HG1 83 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 C7orf71A4D174 169 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 HSPB1P04792 205 aaKnown RBP8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 CELA3AP09093 270 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 PMCHL1Q16048 86 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 NSUN5P1Q3KNT7 163 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 LDLRAD2Q5SZI1 272 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 SIGIRRQ6IA17 410 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 OR11H7Q8NGC8 314 aa8.97□□□□□ -0.97
SRGAP3-207ENST00000485983 AQP3Q92482 292 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms