RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 TPTE2P1Q5T6R2 138 aa13.58□□□□□ -0.24
VIM-205ENST00000485947 OR8H3Q8N146 312 aa13.58□□□□□ -0.24
VIM-205ENST00000485947 ZNF383Q8NA42 475 aa13.58□□□□□ -0.24
VIM-205ENST00000485947 DRAXINQ8NBI3 349 aaPredicted RBP13.58□□□□□ -0.24
VIM-205ENST00000485947 OR5AN1Q8NGI8 311 aa13.58□□□□□ -0.24
VIM-205ENST00000485947 LSM10Q969L4 123 aaKnown RBP13.58□□□□□ -0.24
VIM-205ENST00000485947 ST6GAL2Q96JF0 529 aa13.58□□□□□ -0.24
VIM-205ENST00000485947 OR2A7Q96R45 310 aa13.58□□□□□ -0.24
VIM-205ENST00000485947 PLEKHA2Q9HB19 425 aa13.58□□□□□ -0.24
VIM-205ENST00000485947 SLC35D1Q9NTN3 355 aa13.58□□□□□ -0.24
VIM-205ENST00000485947 ADAP1O75689 374 aa13.57□□□□□ -0.24
VIM-205ENST00000485947 HOXB5P09067 269 aa13.57□□□□□ -0.24
VIM-205ENST00000485947 PAX6P26367 422 aa13.57□□□□□ -0.24
VIM-205ENST00000485947 MC5RP33032 325 aa13.57□□□□□ -0.24
VIM-205ENST00000485947 RAB13P51153 203 aa13.57□□□□□ -0.24
VIM-205ENST00000485947 BRWD1-AS2P59051 145 aa13.57□□□□□ -0.24
VIM-205ENST00000485947 RAP2BP61225 183 aa13.57□□□□□ -0.24
VIM-205ENST00000485947 CYCSP99999 105 aaKnown RBP13.57□□□□□ -0.24
VIM-205ENST00000485947 OR2B11Q5JQS5 317 aa13.57□□□□□ -0.24
VIM-205ENST00000485947 GGNBP1Q5YKI7 109 aa13.57□□□□□ -0.24
VIM-205ENST00000485947 LYZL2Q7Z4W2 148 aa13.57□□□□□ -0.24
VIM-205ENST00000485947 PDPNQ86YL7 162 aa13.57□□□□□ -0.24
VIM-205ENST00000485947 FAM219AQ8IW50 185 aa13.57□□□□□ -0.24
VIM-205ENST00000485947 TCTE3Q8IZS6 198 aa13.57□□□□□ -0.24
VIM-205ENST00000485947 SPIN2AQ99865 258 aa13.57□□□□□ -0.24
VIM-205ENST00000485947 SPIN2BQ9BPZ2 258 aa13.57□□□□□ -0.24
VIM-205ENST00000485947 PDCD10Q9BUL8 212 aa13.57□□□□□ -0.24
VIM-205ENST00000485947 ZNF702PQ9H963 129 aa13.57□□□□□ -0.24
VIM-205ENST00000485947 WNK1Q9H4A3 2382 aa13.56□□□□□ -0.24
VIM-205ENST00000485947 C5orf51A6NDU8 294 aa13.56□□□□□ -0.24
VIM-205ENST00000485947 H0YJW9 148 aa13.56□□□□□ -0.24
VIM-205ENST00000485947 M0QZK8 103 aa13.56□□□□□ -0.24
VIM-205ENST00000485947 CCSO14618 274 aa13.56□□□□□ -0.24
VIM-205ENST00000485947 RAMP3O60896 148 aa13.56□□□□□ -0.24
VIM-205ENST00000485947 S1PR2O95136 353 aa13.56□□□□□ -0.24
VIM-205ENST00000485947 IGKV1-39P01597 117 aa13.56□□□□□ -0.24
VIM-205ENST00000485947 IGKV1D-39P04432 117 aa13.56□□□□□ -0.24
VIM-205ENST00000485947 H2BFSP57053 126 aa13.56□□□□□ -0.24
VIM-205ENST00000485947 KLHDC1Q8N7A1 406 aa13.56□□□□□ -0.24
VIM-205ENST00000485947 AIFM2Q9BRQ8 373 aa13.56□□□□□ -0.24
VIM-205ENST00000485947 RANGRFQ9HD47 186 aaPredicted RBP13.56□□□□□ -0.24
VIM-205ENST00000485947 IGHV1-3A0A0C4DH29 117 aa13.55□□□□□ -0.24
VIM-205ENST00000485947 FAM25EA8MYX2 175 aa13.55□□□□□ -0.24
VIM-205ENST00000485947 SIX6O95475 246 aa13.55□□□□□ -0.24
VIM-205ENST00000485947 SLC25A6P12236 298 aa13.55□□□□□ -0.24
VIM-205ENST00000485947 REG1BP48304 166 aa13.55□□□□□ -0.24
VIM-205ENST00000485947 AKR1C2P52895 323 aa13.55□□□□□ -0.24
VIM-205ENST00000485947 LINC00205P59089 165 aa13.55□□□□□ -0.24
VIM-205ENST00000485947 DIAPH2-AS1Q14236 149 aa13.55□□□□□ -0.24
VIM-205ENST00000485947 NMSQ5H8A3 153 aa13.55□□□□□ -0.24
VIM-205ENST00000485947 THNSL2Q86YJ6 484 aa13.55□□□□□ -0.24
VIM-205ENST00000485947 RNASE11Q8TAA1 199 aaKnown RBP13.55□□□□□ -0.24
VIM-205ENST00000485947 OSR1Q8TAX0 266 aaPredicted RBP13.55□□□□□ -0.24
VIM-205ENST00000485947 RRNAD1Q96FB5 475 aaKnown RBP13.55□□□□□ -0.24
VIM-205ENST00000485947 SEC22AQ96IW7 307 aa13.55□□□□□ -0.24
VIM-205ENST00000485947 C2orf50Q96LR7 162 aa13.55□□□□□ -0.24
VIM-205ENST00000485947 NMES1Q9C002 83 aa13.55□□□□□ -0.24
VIM-205ENST00000485947 SERTAD4Q9NUC0 356 aa13.55□□□□□ -0.24
VIM-205ENST00000485947 WASHC3Q9Y3C0 194 aa13.55□□□□□ -0.24
VIM-205ENST00000485947 C13orf42A0A1B0GVH6 325 aa13.54□□□□□ -0.24
VIM-205ENST00000485947 A0A1W2PPI3 338 aa13.54□□□□□ -0.24
VIM-205ENST00000485947 OR2F2O95006 317 aa13.54□□□□□ -0.24
VIM-205ENST00000485947 CRYZL1O95825 349 aa13.54□□□□□ -0.24
VIM-205ENST00000485947 HRASP01112 189 aa13.54□□□□□ -0.24
VIM-205ENST00000485947 FAM106CPP0CH98 169 aa13.54□□□□□ -0.24
VIM-205ENST00000485947 NQO2P16083 231 aa13.54□□□□□ -0.24
VIM-205ENST00000485947 ERVK-16P61578 105 aa13.54□□□□□ -0.24
VIM-205ENST00000485947 TMEM177Q53S58 311 aa13.54□□□□□ -0.24
VIM-205ENST00000485947 THOC7Q6I9Y2 204 aaKnown RBP13.54□□□□□ -0.24
VIM-205ENST00000485947 R3HDM4Q96D70 268 aa13.54□□□□□ -0.24
VIM-205ENST00000485947 WNT10AQ9GZT5 417 aa13.54□□□□□ -0.24
VIM-205ENST00000485947 SIGLEC9Q9Y336 463 aa13.54□□□□□ -0.24
VIM-205ENST00000485947 A0A1B0GU03 582 aa13.53□□□□□ -0.24
VIM-205ENST00000485947 MARCH11A6NNE9 402 aa13.53□□□□□ -0.24
VIM-205ENST00000485947 FAM90A9PA6NNJ1 464 aa13.53□□□□□ -0.24
VIM-205ENST00000485947 H7C2Y5 167 aa13.53□□□□□ -0.24
VIM-205ENST00000485947 IGKV1-5P01602 117 aa13.53□□□□□ -0.24
VIM-205ENST00000485947 CD1BP29016 333 aa13.53□□□□□ -0.24
VIM-205ENST00000485947 DEFA6Q01524 100 aa13.53□□□□□ -0.24
VIM-205ENST00000485947 HABP2Q14520 560 aaPredicted RBP13.53□□□□□ -0.24
VIM-205ENST00000485947 POU2AF1Q16633 256 aa13.53□□□□□ -0.24
VIM-205ENST00000485947 IAH1Q2TAA2 248 aaPredicted RBP13.53□□□□□ -0.24
VIM-205ENST00000485947 MOB3BQ86TA1 216 aa13.53□□□□□ -0.24
VIM-205ENST00000485947 TMEM219Q86XT9 240 aa13.53□□□□□ -0.24
VIM-205ENST00000485947 ZBTB8BQ8NAP8 495 aaPredicted RBP13.53□□□□□ -0.24
VIM-205ENST00000485947 WIPF2Q8TF74 440 aaPredicted RBP13.53□□□□□ -0.24
VIM-205ENST00000485947 OR10C1Q96KK4 312 aa13.53□□□□□ -0.24
VIM-205ENST00000485947 RBM14Q96PK6 669 aaKnown RBP13.53□□□□□ -0.24
VIM-205ENST00000485947 FYTTD1Q96QD9 318 aaKnown RBP13.53□□□□□ -0.24
VIM-205ENST00000485947 MPTX1A8MV57 137 aa13.52□□□□□ -0.25
VIM-205ENST00000485947 P0C879 139 aa13.52□□□□□ -0.25
VIM-205ENST00000485947 FGL1Q08830 312 aa13.52□□□□□ -0.25
VIM-205ENST00000485947 FLYWCH2Q96CP2 140 aaKnown RBP13.52□□□□□ -0.25
VIM-205ENST00000485947 COA4Q9NYJ1 87 aa13.52□□□□□ -0.25
VIM-205ENST00000485947 FBXO24O75426 580 aa13.51□□□□□ -0.25
VIM-205ENST00000485947 KRASP01116 189 aa13.51□□□□□ -0.25
VIM-205ENST00000485947 G6PCP35575 357 aa13.51□□□□□ -0.25
VIM-205ENST00000485947 VDAC2P45880 294 aaPredicted RBP13.51□□□□□ -0.25
VIM-205ENST00000485947 BLCAPP62952 87 aa13.51□□□□□ -0.25
VIM-205ENST00000485947 SMCO1Q147U7 214 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms