RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 SLC25A38Q96DW6 304 aa3.59□□□□□ -1.83
RTN4-213ENST00000485749 HYLS1Q96M11 299 aa3.59□□□□□ -1.83
RTN4-213ENST00000485749 TSPAN32Q96QS1 320 aa3.59□□□□□ -1.83
RTN4-213ENST00000485749 S100A13Q99584 98 aa3.59□□□□□ -1.83
RTN4-213ENST00000485749 EIF5A2Q9GZV4 153 aaKnown RBP3.59□□□□□ -1.83
RTN4-213ENST00000485749 TCEAL2Q9H3H9 227 aaPredicted RBP3.59□□□□□ -1.83
RTN4-213ENST00000485749 JPT2Q9H910 190 aa3.59□□□□□ -1.83
RTN4-213ENST00000485749 EXOSC3Q9NQT5 275 aaKnown RBP3.59□□□□□ -1.83
RTN4-213ENST00000485749 ZNF586Q9NXT0 402 aa3.59□□□□□ -1.83
RTN4-213ENST00000485749 TAS2R8Q9NYW2 309 aa3.59□□□□□ -1.83
RTN4-213ENST00000485749 POMPQ9Y244 141 aa3.59□□□□□ -1.83
RTN4-213ENST00000485749 ZNF257Q9Y2Q1 563 aa3.59□□□□□ -1.83
RTN4-213ENST00000485749 SHANK3Q9BYB0 1731 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 KIF13AQ9H1H9 1805 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 NAV1Q8NEY1 1877 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 A0A087WXM4 84 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 IGLV9-49A0A0B4J1Y8 123 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 PLAC8L1A1L4L8 177 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 E9PLD3 99 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 H3BP45 60 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 APOC4-APOC2K7ER74 178 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 OVOL1O14753 267 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 NPFFO15130 113 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 NDUFS5O43920 106 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 NPIPB7O75200 414 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 MPC2O95563 127 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 DUS4LO95620 317 aaKnown RBP3.58□□□□□ -1.84
RTN4-213ENST00000485749 ZNF682O95780 498 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 APOC2P02655 101 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 APOC3P02656 99 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 OR5AC1P0C628 307 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 ZSCAN5DPP0CG00 497 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 OR12D1P0DN82 309 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 LAMP1P11279 417 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 ZNF19P17023 458 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 RPL22P35268 128 aaKnown RBP3.58□□□□□ -1.84
RTN4-213ENST00000485749 AKR1C2P52895 323 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 FABP5Q01469 135 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 DEFA5Q01523 94 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 PAX8Q06710 450 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 IQCJQ1A5X6 159 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 FAM74A1Q5RGS3 127 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 SLC25A30Q5SVS4 291 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 IGFL2Q6UWQ7 119 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 ZNF440Q8IYI8 595 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 DEFB107AQ8IZN7 70 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 C5orf17Q8NAS9 161 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 STARD4Q96DR4 205 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 MCEEQ96PE7 176 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 NMNAT3Q96T66 252 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 SOSTQ9BQB4 213 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 KRTAP1-5Q9BYS1 174 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 SLIRPQ9GZT3 109 aaKnown RBP3.58□□□□□ -1.84
RTN4-213ENST00000485749 CALYQ9NYX4 217 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 KLK11Q9UBX7 282 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 RIMS3Q9UJD0 308 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 VSIG4Q9Y279 399 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 ZNF256Q9Y2P7 627 aaPredicted RBP3.58□□□□□ -1.84
RTN4-213ENST00000485749 FIS1Q9Y3D6 152 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 KCNE3Q9Y6H6 103 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 PXMP4Q9Y6I8 212 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 MYH1P12882 1939 aa3.58□□□□□ -1.84
RTN4-213ENST00000485749 LOC100130705A0A1B0GUX0 176 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 C7orf71A4D174 169 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 RBMY1BA6NDE4 496 aaKnown RBP3.57□□□□□ -1.84
RTN4-213ENST00000485749 RBMY1EA6NEQ0 496 aaKnown RBP3.57□□□□□ -1.84
RTN4-213ENST00000485749 GGT3PA6NGU5 568 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 ZNF724A8MTY0 619 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 ZNF705EA8MWA4 302 aaPredicted RBP3.57□□□□□ -1.84
RTN4-213ENST00000485749 GGTLC3B5MD39 225 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 SOCS2O14508 198 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 CDC42EP2O14613 210 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 PHLPP1O60346 1717 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 CA2P00918 260 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 MT-ND4LP03901 98 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 CD14P08571 375 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 FCGR3AP08637 254 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 RBMY1DP0C7P1 496 aaKnown RBP3.57□□□□□ -1.84
RTN4-213ENST00000485749 RBMY1A1P0DJD3 496 aaKnown RBP3.57□□□□□ -1.84
RTN4-213ENST00000485749 ERGP11308 486 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 CSRP1P21291 193 aaKnown RBP3.57□□□□□ -1.84
RTN4-213ENST00000485749 GADD45AP24522 165 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 PRSS3P35030 304 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 TGFBR1P36897 503 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 CCR2P41597 374 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 LPAR6P43657 344 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 ATP5G3P48201 142 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 NUDT2P50583 147 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 NUP98P52948 1817 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 SLC25A1P53007 311 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 NDUFA6P56556 154 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 TAS2R46P59540 309 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 CACNG7P62955 275 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 HES1Q14469 280 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 Q499Y3 187 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 PRR30Q53SZ7 412 aaPredicted RBP3.57□□□□□ -1.84
RTN4-213ENST00000485749 LRRC10Q5BKY1 277 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 DDX60LQ5H9U9 1706 aaKnown RBP3.57□□□□□ -1.84
RTN4-213ENST00000485749 MEIG1Q5JSS6 88 aa3.57□□□□□ -1.84
RTN4-213ENST00000485749 TSPO2Q5TGU0 170 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms