RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 TBPP20226 339 aa9.86□□□□□ -0.83
HDAC6-227ENST00000485102 TAS2R46P59540 309 aa9.86□□□□□ -0.83
HDAC6-227ENST00000485102 ARPC4P59998 168 aa9.86□□□□□ -0.83
HDAC6-227ENST00000485102 PJVKQ0ZLH3 352 aa9.86□□□□□ -0.83
HDAC6-227ENST00000485102 RPEL1Q2QD12 228 aa9.86□□□□□ -0.83
HDAC6-227ENST00000485102 BVESQ8NE79 360 aa9.86□□□□□ -0.83
HDAC6-227ENST00000485102 FCAMRQ8WWV6 532 aa9.86□□□□□ -0.83
HDAC6-227ENST00000485102 BORCS5Q969J3 196 aa9.86□□□□□ -0.83
HDAC6-227ENST00000485102 SLC35D1Q9NTN3 355 aa9.86□□□□□ -0.83
HDAC6-227ENST00000485102 PEMTQ9UBM1 199 aa9.86□□□□□ -0.83
HDAC6-227ENST00000485102 MRPS7Q9Y2R9 242 aaKnown RBP9.86□□□□□ -0.83
HDAC6-227ENST00000485102 ALMS1Q8TCU4 4167 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 IGKV1-6A0A0C4DH72 117 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 TMEM235A6NFC5 223 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 FABP12A6NFH5 140 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 GABARAPH6UMI1 98 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 FABP7O15540 132 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 TRBV12-3P01733 135 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 EIF4EP06730 217 aaKnown RBP9.85□□□□□ -0.83
HDAC6-227ENST00000485102 RCVRNP35243 200 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 ZNF45Q02386 682 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 IL18Q14116 193 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 MRGPRG-AS1Q2M3A8 158 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 TMEM177Q53S58 311 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 CNIH2Q6PI25 160 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 HOGA1Q86XE5 327 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 ADAD2Q8NCV1 583 aaKnown RBP9.85□□□□□ -0.83
HDAC6-227ENST00000485102 OR10J5Q8NHC4 309 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 S100ZQ8WXG8 99 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 HDHD3Q9BSH5 251 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-227ENST00000485102 RDH8Q9NYR8 311 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 PTTG2Q9NZH5 202 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 KCNK7Q9Y2U2 307 aa9.85□□□□□ -0.83
HDAC6-227ENST00000485102 TRBV9A0A0B4J1U6 114 aa9.84□□□□□ -0.83
HDAC6-227ENST00000485102 SRRM4A7MD48 611 aaKnown RBP9.84□□□□□ -0.83
HDAC6-227ENST00000485102 ZNF785A8K8V0 405 aa9.84□□□□□ -0.83
HDAC6-227ENST00000485102 M0R1X1 148 aa9.84□□□□□ -0.83
HDAC6-227ENST00000485102 CTDSP2O14595 271 aa9.84□□□□□ -0.83
HDAC6-227ENST00000485102 RBMXL2O75526 392 aaKnown RBP9.84□□□□□ -0.83
HDAC6-227ENST00000485102 ETV6P41212 452 aa9.84□□□□□ -0.83
HDAC6-227ENST00000485102 AP3S2P59780 193 aa9.84□□□□□ -0.83
HDAC6-227ENST00000485102 PLA2G7Q13093 441 aa9.84□□□□□ -0.83
HDAC6-227ENST00000485102 FAM209BQ5JX69 171 aa9.84□□□□□ -0.83
HDAC6-227ENST00000485102 TMEM17Q86X19 198 aa9.84□□□□□ -0.83
HDAC6-227ENST00000485102 BEST4Q8NFU0 473 aa9.84□□□□□ -0.83
HDAC6-227ENST00000485102 GINS4Q9BRT9 223 aa9.84□□□□□ -0.83
HDAC6-227ENST00000485102 ST6GALNAC5Q9BVH7 336 aa9.84□□□□□ -0.83
HDAC6-227ENST00000485102 ANXA10Q9UJ72 324 aa9.84□□□□□ -0.83
HDAC6-227ENST00000485102 FAM223BA6NKX1 122 aa9.83□□□□□ -0.84
HDAC6-227ENST00000485102 HLA-DQB1P01920 261 aa9.83□□□□□ -0.84
HDAC6-227ENST00000485102 OR9G9P0C7N8 305 aa9.83□□□□□ -0.84
HDAC6-227ENST00000485102 RRASP10301 218 aa9.83□□□□□ -0.84
HDAC6-227ENST00000485102 TNFSF8P32971 234 aa9.83□□□□□ -0.84
HDAC6-227ENST00000485102 FAUP35544 74 aaKnown RBP9.83□□□□□ -0.84
HDAC6-227ENST00000485102 FAM223AQ8IWN6 122 aa9.83□□□□□ -0.84
HDAC6-227ENST00000485102 TEX45Q8NA69 505 aa9.83□□□□□ -0.84
HDAC6-227ENST00000485102 GPX8Q8TED1 209 aa9.83□□□□□ -0.84
HDAC6-227ENST00000485102 HARBI1Q96MB7 349 aa9.83□□□□□ -0.84
HDAC6-227ENST00000485102 NEURL2Q9BR09 285 aa9.83□□□□□ -0.84
HDAC6-227ENST00000485102 CABLES2Q9BTV7 478 aa9.83□□□□□ -0.84
HDAC6-227ENST00000485102 ZC4H2Q9NQZ6 224 aa9.83□□□□□ -0.84
HDAC6-227ENST00000485102 SDHAF2Q9NX18 166 aa9.83□□□□□ -0.84
HDAC6-227ENST00000485102 SLC2A8Q9NY64 477 aa9.83□□□□□ -0.84
HDAC6-227ENST00000485102 RBMY1BA6NDE4 496 aaKnown RBP9.82□□□□□ -0.84
HDAC6-227ENST00000485102 RBMY1EA6NEQ0 496 aaKnown RBP9.82□□□□□ -0.84
HDAC6-227ENST00000485102 MSGN1A6NI15 193 aa9.82□□□□□ -0.84
HDAC6-227ENST00000485102 BMPR1BO00238 502 aa9.82□□□□□ -0.84
HDAC6-227ENST00000485102 GSTZ1O43708 216 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-227ENST00000485102 RBMY1DP0C7P1 496 aaKnown RBP9.82□□□□□ -0.84
HDAC6-227ENST00000485102 NAT1P18440 290 aa9.82□□□□□ -0.84
HDAC6-227ENST00000485102 CD81P60033 236 aa9.82□□□□□ -0.84
HDAC6-227ENST00000485102 UBE2KP61086 200 aa9.82□□□□□ -0.84
HDAC6-227ENST00000485102 PRSS8Q16651 343 aa9.82□□□□□ -0.84
HDAC6-227ENST00000485102 DEFB114Q30KQ6 69 aa9.82□□□□□ -0.84
HDAC6-227ENST00000485102 CD300EQ496F6 205 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-227ENST00000485102 SNX29P2Q8IUI4 249 aa9.82□□□□□ -0.84
HDAC6-227ENST00000485102 GDPD1Q8N9F7 314 aa9.82□□□□□ -0.84
HDAC6-227ENST00000485102 OR5AP2Q8NGF4 316 aa9.82□□□□□ -0.84
HDAC6-227ENST00000485102 SMIM4Q8WVI0 70 aa9.82□□□□□ -0.84
HDAC6-227ENST00000485102 NUDCD2Q8WVJ2 157 aa9.82□□□□□ -0.84
HDAC6-227ENST00000485102 PLEKHA3Q9HB20 300 aa9.82□□□□□ -0.84
HDAC6-227ENST00000485102 RETNQ9HD89 108 aa9.82□□□□□ -0.84
HDAC6-227ENST00000485102 COA4Q9NYJ1 87 aa9.82□□□□□ -0.84
HDAC6-227ENST00000485102 ZNF230Q9UIE0 474 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-227ENST00000485102 TRBV6-7A0A0A0MS04 114 aa9.81□□□□□ -0.84
HDAC6-227ENST00000485102 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.81□□□□□ -0.84
HDAC6-227ENST00000485102 SHOXO15266 292 aa9.81□□□□□ -0.84
HDAC6-227ENST00000485102 S100GP29377 79 aa9.81□□□□□ -0.84
HDAC6-227ENST00000485102 KIR2DS2P43631 304 aa9.81□□□□□ -0.84
HDAC6-227ENST00000485102 TAS2R19P59542 299 aa9.81□□□□□ -0.84
HDAC6-227ENST00000485102 CBX3Q13185 183 aa9.81□□□□□ -0.84
HDAC6-227ENST00000485102 MEF2DQ14814 521 aa9.81□□□□□ -0.84
HDAC6-227ENST00000485102 RTL8BQ17RB0 113 aa9.81□□□□□ -0.84
HDAC6-227ENST00000485102 CNPY1Q3B7I2 92 aa9.81□□□□□ -0.84
HDAC6-227ENST00000485102 LPCAT3Q6P1A2 487 aa9.81□□□□□ -0.84
HDAC6-227ENST00000485102 OR5H2Q8NGV7 314 aa9.81□□□□□ -0.84
HDAC6-227ENST00000485102 DDB2Q92466 427 aa9.81□□□□□ -0.84
HDAC6-227ENST00000485102 ADTRPQ96IZ2 230 aa9.81□□□□□ -0.84
HDAC6-227ENST00000485102 MIXL1Q9H2W2 232 aa9.81□□□□□ -0.84
HDAC6-227ENST00000485102 AKIP1Q9NQ31 210 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms