RNA–Protein interactions for RNA: ENST00000484388.1

ABCA4-206, Transcript of ATP binding cassette subfamily A member 4, human

TSL 2

Gene ABCA4, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA4-206	ENST00000484388	HES3	Q5TGS1	186 aa		1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	TTC33	Q6PID6	262 aa	Predicted RBP	1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	PLEKHG7	Q6ZR37	379 aa		1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	TCF24	Q7RTU0	167 aa		1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	TET1	Q8NFU7	2136 aa		1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	OR5D18	Q8NGL1	313 aa		1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	OR11L1	Q8NGX0	322 aa		1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	OR4A5	Q8NH83	315 aa		1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	OR5K1	Q8NHB7	308 aa		1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	STOML3	Q8TAV4	291 aa		1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	SMIM12	Q96EX1	92 aa		1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	SLC25A44	Q96H78	314 aa	Predicted RBP	1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	ARL6	Q9H0F7	186 aa		1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	ZNF286A	Q9HBT8	521 aa		1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	TMEM216	Q9P0N5	145 aa		1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	OR5V1	Q9UGF6	321 aa		1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	PHLDA3	Q9Y5J5	127 aa		1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	LCT	P09848	1927 aa		1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	CLUH	O75153	1309 aa		1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	MYO3B	Q8WXR4	1341 aa		1.08	□□□□□ -2.24
ABCA4-206	ENST00000484388	SPAG17	Q6Q759	2223 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	VPS13C	Q709C8	3753 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	DOCK6	Q96HP0	2047 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	FABP12	A6NFH5	140 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	ITGB1BP1	O14713	200 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	FBP1	P09467	338 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	PET100	P0DJ07	73 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	LGALS3	P17931	250 aa	Known RBP	1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	F8A1	P23610	371 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	GADD45A	P24522	165 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	AGTR1	P30556	359 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	PPP1R2	P41236	205 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	PSMD7	P51665	324 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	SKP1	P63208	163 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	SRSF6	Q13247	344 aa	Known RBP	1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	PYDC2	Q56P42	97 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	CENPW	Q5EE01	88 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	SDHAF4	Q5VUM1	108 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	TCF23	Q7RTU1	214 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	LRP11	Q86VZ4	500 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	LYPD6	Q86Y78	171 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	ZBTB8OS	Q8IWT0	167 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	HS3ST5	Q8IZT8	346 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	BLID	Q8IZY5	108 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	C2orf73	Q8N5S3	287 aa	Predicted RBP	1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	OR11G2	Q8NGC1	345 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	CD200R1	Q8TD46	325 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	RAD51AP1	Q96B01	352 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	IGF2BP2-AS1	Q96M15	143 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	RBP7	Q96R05	134 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	GPR22	Q99680	433 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	C7orf50	Q9BRJ6	194 aa	Known RBP	1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	LLPH	Q9BRT6	129 aa	Known RBP	1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	HIGD2A	Q9BW72	106 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	BCL2L14	Q9BZR8	327 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	SLC19A3	Q9BZV2	496 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	HDHD2	Q9H0R4	259 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	METTL9	Q9H1A3	318 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	IMP3	Q9NV31	184 aa	Known RBP	1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	SLC23A2	Q9UGH3	650 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	ZNF230	Q9UIE0	474 aa	Predicted RBP	1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	MCTS1	Q9ULC4	181 aa	Known RBP	1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	ECM29	Q5VYK3	1845 aa		1.07	□□□□□ -2.24
ABCA4-206	ENST00000484388	TRPM6	Q9BX84	2022 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	HIVEP2	P31629	2446 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	SIPA1L1	O43166	1804 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	GOLGA4	Q13439	2230 aa	Known RBP	1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	IGLV10-54	A0A075B6I4	117 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	IGKV1-12	A0A0C4DH73	117 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	DAPL1	A0PJW8	107 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	C5orf67	F2Z3F1	127 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388		F5H5T6	163 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	KLRC4-KLRK1	H3BQV0	150 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	CCRL2	O00421	344 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	EEF1E1	O43324	174 aa	Known RBP	1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	CDS2	O95674	445 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	IGKV1D-12	P01611	117 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	TPM3	P06753	285 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	HIST1H1C	P16403	213 aa	Known RBP	1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	CFL1	P23528	166 aa	Known RBP	1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	ANP32A	P39687	249 aa	Known RBP	1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	RPL14	P50914	215 aa	Known RBP	1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	UBE2G2	P60604	165 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	SNRPF	P62306	86 aa	Known RBP	1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	DYNLL1	P63167	89 aa	Known RBP	1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	DEFB103A	P81534	67 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	MGAT3	Q09327	533 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	MED21	Q13503	144 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	APOF	Q13790	326 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	OR8G1	Q15617	311 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	TBC1D28	Q2M2D7	210 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	HCP5	Q6MZN7	132 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	EBLN2	Q6P2I7	272 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	DRAM2	Q6UX65	266 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	SCGB1D4	Q6XE38	83 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	BRD3OS	Q6XYD6	125 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	DEFB128	Q7Z7B8	93 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	CD302	Q8IX05	232 aa		1.06	□□□□□ -2.24
ABCA4-206	ENST00000484388	FAM9C	Q8IZT9	166 aa		1.06	□□□□□ -2.24

Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms