RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 SYNGR2O43760 224 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 CHST1O43916 411 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 PITX3O75364 302 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 RBMXL2O75526 392 aaKnown RBP5.64□□□□□ -1.51
BRCA1-216ENST00000484087 LY86O95711 162 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 KRASP01116 189 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 NMBP08949 121 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 IGHV4-38-2P0DP08 117 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 RRASP10301 218 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 DUTP33316 252 aaKnown RBP5.64□□□□□ -1.51
BRCA1-216ENST00000484087 THBS3P49746 956 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 EWSR1Q01844 656 aaKnown RBP eCLIP5.64□□□□□ -1.51
BRCA1-216ENST00000484087 EIF4EBP1Q13541 118 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-216ENST00000484087 OR2B11Q5JQS5 317 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 CXorf66Q5JRM2 361 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-216ENST00000484087 RUSC1-AS1Q66K80 236 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 HEPN1Q6WQI6 88 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 ZNF841Q6ZN19 808 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 LYG1Q8N1E2 194 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-216ENST00000484087 UBAC2Q8NBM4 344 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 DMBX1Q8NFW5 382 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 NEIL1Q96FI4 390 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-216ENST00000484087 CLCC1Q96S66 551 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 AIFM2Q9BRQ8 373 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 SMIM3Q9BZL3 60 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 MAGT1Q9H0U3 335 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 ESM1Q9NQ30 184 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 CYTL1Q9NRR1 136 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-216ENST00000484087 RPUSD1Q9UJJ7 312 aaKnown RBP5.64□□□□□ -1.51
BRCA1-216ENST00000484087 INSIG2Q9Y5U4 225 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 WSB1Q9Y6I7 421 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 hCG_1809904A0A1W2PP81 198 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 A0A1W2PPE2 198 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 A0A1W2PR64 198 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 A0A1W2PRV1 198 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 FAM24AA6NFZ4 105 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 FAM90A9PA6NNJ1 464 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 C17orf98A8MV24 154 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 A8MXK9 166 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 LEUTXA8MZ59 168 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 RAMP3O60896 148 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 FCGR3BO75015 233 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 FOXH1O75593 365 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 DFFBO76075 338 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 SCAF4O95104 1147 aaKnown RBP5.64□□□□□ -1.51
BRCA1-216ENST00000484087 S1PR2O95136 353 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 IGKV1-39P01597 117 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 IGKV1-5P01602 117 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 IGKV1D-39P04432 117 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 NQO2P16083 231 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 G6PCP35575 357 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 GNG10P50151 68 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 TAS2R30P59541 319 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 RPL30P62888 115 aaKnown RBP5.64□□□□□ -1.51
BRCA1-216ENST00000484087 PAX2Q02962 417 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 PRAMEF5Q5TYX0 476 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 WDR25Q64LD2 544 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-216ENST00000484087 RPL7L1Q6DKI1 246 aaKnown RBP5.64□□□□□ -1.51
BRCA1-216ENST00000484087 FAM53AQ6NSI3 398 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-216ENST00000484087 BRD3OSQ6XYD6 125 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 MRPL41Q8IXM3 137 aaKnown RBP5.64□□□□□ -1.51
BRCA1-216ENST00000484087 TMEM252Q8N6L7 170 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 OR8B3Q8NGG8 313 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 OR4S2Q8NH73 311 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 PCNPQ8WW12 178 aaKnown RBP5.64□□□□□ -1.51
BRCA1-216ENST00000484087 TMED6Q8WW62 240 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 R3HDM4Q96D70 268 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 ZNF48Q96MX3 618 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-216ENST00000484087 CIB3Q96Q77 187 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-216ENST00000484087 OR8B2Q96RD0 313 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 C19orf24Q9BVV8 132 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 IFI27L2Q9H2X8 130 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 MIOXQ9UGB7 285 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 DSCAML1Q8TD84 2053 aa5.64□□□□□ -1.51
BRCA1-216ENST00000484087 SAA2-SAA4A0A096LPE2 208 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 IGHV2-70DA0A0C4DH43 119 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 A0A0G2JRQ6 117 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 MARCH11A6NNE9 402 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 LINC00473A8K010 186 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 NUDT19A8MXV4 375 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 I3L521 148 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 TNFRSF13BO14836 293 aaPredicted RBP5.63□□□□□ -1.51
BRCA1-216ENST00000484087 NXPH3O95157 252 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 HRASP01112 189 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 FSHBP01225 129 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 IGHV3-7P01780 117 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 SEC11BP0C7V7 166 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 SAA2P0DJI9 122 aaPredicted RBP5.63□□□□□ -1.51
BRCA1-216ENST00000484087 IL3RAP26951 378 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 ZNF134P52741 427 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 HBG1P69891 147 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 HBG2P69892 147 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 RPP30P78346 268 aaKnown RBP5.63□□□□□ -1.51
BRCA1-216ENST00000484087 BLOC1S1P78537 153 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 ZNF273Q14593 569 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 RTL8BQ17RB0 113 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 MIDNQ504T8 468 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 RPL39P5Q59GN2 51 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms