RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 TGFBR1P36897 503 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 HBA1P69905 142 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 ZNF79Q15937 498 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 DEFB115Q30KQ5 88 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 Q6Q795 121 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 AMTNQ6UX39 209 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 GPHB5Q86YW7 130 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 ZNF283Q8N7M2 679 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 SPANXA2-OT1Q8N9U9 137 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 ZNF675Q8TD23 568 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 RBPMSQ93062 196 aaKnown RBP2.91□□□□□ -1.94
PTCD3-214ENST00000483925 TOMM6Q96B49 74 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 PLEKHB2Q96CS7 222 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 RMND5BQ96G75 393 aaPredicted RBP2.91□□□□□ -1.94
PTCD3-214ENST00000483925 C2orf50Q96LR7 162 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 IP6K3Q96PC2 410 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 ERMAPQ96PL5 475 aaPredicted RBP2.91□□□□□ -1.94
PTCD3-214ENST00000483925 RNF5Q99942 180 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 EFCAB11Q9BUY7 163 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 TMEM138Q9NPI0 162 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 ZNF586Q9NXT0 402 aa2.91□□□□□ -1.94
PTCD3-214ENST00000483925 KLK5Q9Y337 293 aaPredicted RBP2.91□□□□□ -1.94
PTCD3-214ENST00000483925 IGLV4-69A0A075B6H9 119 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 TMEM269A0A1B0GVZ9 245 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 TMEM150BA6NC51 233 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 RIIAD1A6NNX1 92 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 J3QRK9 145 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 PLA2G10O15496 165 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 IFNA10P01566 189 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 TFPTP0C1Z6 253 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 CISD3P0C7P0 127 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 CGB3P0DN86 165 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 CGB7P0DN87 165 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 NPPCP23582 126 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 ATP5G3P48201 142 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 RAB13P51153 203 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 CCDC153Q494R4 210 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 Q5W150 140 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 CLVS1Q8IUQ0 354 aaPredicted RBP2.9□□□□□ -1.95
PTCD3-214ENST00000483925 C12orf45Q8N5I9 185 aaPredicted RBP2.9□□□□□ -1.95
PTCD3-214ENST00000483925 C3orf22Q8N5N4 141 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 OR9Q1Q8NGQ5 310 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 SLC25A40Q8TBP6 338 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 MBD3L1Q8WWY6 194 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 HIST1H2BAQ96A08 127 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 IGF2BP2-AS1Q96M15 143 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 TSC22D3Q99576 134 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 HSPB9Q9BQS6 159 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 IMUPQ9GZP8 106 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 C11orf68Q9H3H3 251 aaKnown RBP2.9□□□□□ -1.95
PTCD3-214ENST00000483925 PDFQ9HBH1 243 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 LAMTOR3Q9UHA4 124 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 SNX12Q9UMY4 172 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 KIF25-AS1Q9Y6Z4 181 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 TET2Q6N021 2002 aaPredicted RBP2.9□□□□□ -1.95
PTCD3-214ENST00000483925 SCN2AQ99250 2005 aa2.9□□□□□ -1.95
PTCD3-214ENST00000483925 ZCCHC11Q5TAX3 1644 aaKnown RBP2.9□□□□□ -1.95
PTCD3-214ENST00000483925 PIKFYVEQ9Y2I7 2098 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 NID2Q14112 1375 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 TRBV24-1A0A075B6N3 115 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 A8MWP4 228 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 UBE2L6O14933 153 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 CCNKO75909 580 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 GADD45GO95257 159 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 FAM107AO95990 144 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 LINC00869P0C866 280 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 SMIM17P0DL12 118 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 EMP1P54849 157 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 DHRS2Q13268 280 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 SPCS2Q15005 226 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 OR8G1Q15617 311 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 BRMS1LQ5PSV4 323 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 LYRM7Q5U5X0 104 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 ZFAND6Q6FIF0 208 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 KMT2EQ8IZD2 1858 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 ZFAND2AQ8N6M9 145 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 OR13C4Q8NGS5 318 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 OR5J2Q8NH18 312 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 CD200R1Q8TD46 325 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 LMX1AQ8TE12 382 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 PLA2G2FQ9BZM2 168 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 EFCAB1Q9HAE3 211 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 CELA1Q9UNI1 258 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 CYSLTR1Q9Y271 337 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 LINC00588Q9Y4M8 146 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 NEO1Q92859 1461 aa2.89□□□□□ -1.95
PTCD3-214ENST00000483925 FMN1Q68DA7 1419 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 UHRF1BP1Q6BDS2 1440 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 A6NED7 52 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 SH2D1AO60880 128 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 BANF1O75531 89 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 NDUFB2O95178 105 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 IGKV1D-33P01593 117 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 IGKV1-33P01594 117 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 TRGV3P03979 118 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 IGHV3-30-3P0DP02 117 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 CRABP2P29373 138 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 BLVRBP30043 206 aaPredicted RBP2.88□□□□□ -1.95
PTCD3-214ENST00000483925 PSMD8P48556 350 aa2.88□□□□□ -1.95
PTCD3-214ENST00000483925 AP1S1P61966 158 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms