RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 SSX9Q7RTT3 188 aa12.1□□□□□ -0.47
PHGDH-205ENST00000482968 PDPNQ86YL7 162 aa12.1□□□□□ -0.47
PHGDH-205ENST00000482968 OR4C13Q8NGP0 309 aa12.1□□□□□ -0.47
PHGDH-205ENST00000482968 RNASE11Q8TAA1 199 aaKnown RBP12.1□□□□□ -0.47
PHGDH-205ENST00000482968 PCNPQ8WW12 178 aaKnown RBP12.1□□□□□ -0.47
PHGDH-205ENST00000482968 CFHR4Q92496 578 aa12.1□□□□□ -0.47
PHGDH-205ENST00000482968 R3HDM4Q96D70 268 aa12.1□□□□□ -0.47
PHGDH-205ENST00000482968 RITA1Q96K30 269 aa12.1□□□□□ -0.47
PHGDH-205ENST00000482968 IGKV1-5P01602 117 aa12.09□□□□□ -0.47
PHGDH-205ENST00000482968 VDAC1P21796 283 aa12.09□□□□□ -0.47
PHGDH-205ENST00000482968 CD1BP29016 333 aa12.09□□□□□ -0.47
PHGDH-205ENST00000482968 H2BFSP57053 126 aa12.09□□□□□ -0.47
PHGDH-205ENST00000482968 BPIFB3P59826 476 aa12.09□□□□□ -0.47
PHGDH-205ENST00000482968 ZNF345Q14585 488 aa12.09□□□□□ -0.47
PHGDH-205ENST00000482968 IZUMO4Q1ZYL8 232 aa12.09□□□□□ -0.47
PHGDH-205ENST00000482968 DHRS7BQ6IAN0 325 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-205ENST00000482968 IL17RELQ6ZVW7 336 aa12.09□□□□□ -0.47
PHGDH-205ENST00000482968 BCL6BQ8N143 479 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-205ENST00000482968 DMBX1Q8NFW5 382 aa12.09□□□□□ -0.47
PHGDH-205ENST00000482968 RRNAD1Q96FB5 475 aaKnown RBP12.09□□□□□ -0.47
PHGDH-205ENST00000482968 SEC22AQ96IW7 307 aa12.09□□□□□ -0.47
PHGDH-205ENST00000482968 TMED3Q9Y3Q3 217 aa12.09□□□□□ -0.47
PHGDH-205ENST00000482968 A0A0G2JRQ6 117 aa12.08□□□□□ -0.48
PHGDH-205ENST00000482968 MARCH11A6NNE9 402 aa12.08□□□□□ -0.48
PHGDH-205ENST00000482968 SRRM4A7MD48 611 aaKnown RBP12.08□□□□□ -0.48
PHGDH-205ENST00000482968 VENTXO95231 258 aa12.08□□□□□ -0.48
PHGDH-205ENST00000482968 FSHBP01225 129 aa12.08□□□□□ -0.48
PHGDH-205ENST00000482968 IGKV1D-33P01593 117 aa12.08□□□□□ -0.48
PHGDH-205ENST00000482968 IGKV1-33P01594 117 aa12.08□□□□□ -0.48
PHGDH-205ENST00000482968 CD99P14209 185 aa12.08□□□□□ -0.48
PHGDH-205ENST00000482968 NQO2P16083 231 aa12.08□□□□□ -0.48
PHGDH-205ENST00000482968 HLA-GP17693 338 aa12.08□□□□□ -0.48
PHGDH-205ENST00000482968 ARHGDIBP52566 201 aa12.08□□□□□ -0.48
PHGDH-205ENST00000482968 FLI1Q01543 452 aaPredicted RBP12.08□□□□□ -0.48
PHGDH-205ENST00000482968 HES1Q14469 280 aa12.08□□□□□ -0.48
PHGDH-205ENST00000482968 HABP2Q14520 560 aaPredicted RBP12.08□□□□□ -0.48
PHGDH-205ENST00000482968 HNF4GQ14541 408 aa12.08□□□□□ -0.48
PHGDH-205ENST00000482968 FAM120AOSQ5T036 256 aa12.08□□□□□ -0.48
PHGDH-205ENST00000482968 OR10C1Q96KK4 312 aa12.08□□□□□ -0.48
PHGDH-205ENST00000482968 CXorf58Q96LI9 332 aa12.08□□□□□ -0.48
PHGDH-205ENST00000482968 HARBI1Q96MB7 349 aa12.08□□□□□ -0.48
PHGDH-205ENST00000482968 TLN2Q9Y4G6 2542 aa12.08□□□□□ -0.48
PHGDH-205ENST00000482968 PIGBOS1A0A0B4J2F0 54 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 DUXBA0A1W2PPF3 345 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 NUDT19A8MXV4 375 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 ATG12O94817 140 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 HRASP01112 189 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 SNRNP70P08621 437 aaKnown RBP12.07□□□□□ -0.48
PHGDH-205ENST00000482968 BRS3P32247 399 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 TMEM177Q53S58 311 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 ZNF546Q86UE3 836 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 OR5M8Q8NGP6 311 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 OR1S1Q8NH92 325 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 OSR1Q8TAX0 266 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-205ENST00000482968 GPR146Q96CH1 333 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 WDR89Q96FK6 387 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-205ENST00000482968 RHOVQ96L33 236 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 PDCD10Q9BUL8 212 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 MEGF9Q9H1U4 602 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 ZFHX3Q15911 3703 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 LY6G6DO95868 133 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 FBP1P09467 338 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 SLC25A4P12235 298 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 ERVK-16P61578 105 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 SRSF4Q08170 494 aaKnown RBP12.07□□□□□ -0.48
PHGDH-205ENST00000482968 NMSQ5H8A3 153 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 H2BFWTQ7Z2G1 175 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 TMUB1Q9BVT8 246 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 GSKIPQ9P0R6 139 aa12.07□□□□□ -0.48
PHGDH-205ENST00000482968 SETXQ7Z333 2677 aaKnown RBP12.07□□□□□ -0.48
PHGDH-205ENST00000482968 MDFIC2A0A1B0GVS7 189 aa12.06□□□□□ -0.48
PHGDH-205ENST00000482968 CNTFRP26992 372 aa12.06□□□□□ -0.48
PHGDH-205ENST00000482968 FBLN7Q53RD9 439 aa12.06□□□□□ -0.48
PHGDH-205ENST00000482968 Q6ZRM9 215 aa12.06□□□□□ -0.48
PHGDH-205ENST00000482968 CLRN3Q8NCR9 226 aa12.06□□□□□ -0.48
PHGDH-205ENST00000482968 LSM10Q969L4 123 aaKnown RBP12.06□□□□□ -0.48
PHGDH-205ENST00000482968 EAF1Q96JC9 268 aaPredicted RBP12.06□□□□□ -0.48
PHGDH-205ENST00000482968 SSX3Q99909 188 aa12.06□□□□□ -0.48
PHGDH-205ENST00000482968 MMP24Q9Y5R2 645 aa12.06□□□□□ -0.48
PHGDH-205ENST00000482968 FAM90A9PA6NNJ1 464 aa12.05□□□□□ -0.48
PHGDH-205ENST00000482968 MOSP00540 346 aa12.05□□□□□ -0.48
PHGDH-205ENST00000482968 FAM106CPP0CH98 169 aa12.05□□□□□ -0.48
PHGDH-205ENST00000482968 LGALS7P47929 136 aa12.05□□□□□ -0.48
PHGDH-205ENST00000482968 IAH1Q2TAA2 248 aaPredicted RBP12.05□□□□□ -0.48
PHGDH-205ENST00000482968 DEFB112Q30KQ8 113 aa12.05□□□□□ -0.48
PHGDH-205ENST00000482968 KCNRGQ8N5I3 272 aa12.05□□□□□ -0.48
PHGDH-205ENST00000482968 TEX29Q8N6K0 151 aa12.05□□□□□ -0.48
PHGDH-205ENST00000482968 OR2T10Q8NGZ9 312 aa12.05□□□□□ -0.48
PHGDH-205ENST00000482968 ST8SIA2Q92186 375 aa12.05□□□□□ -0.48
PHGDH-205ENST00000482968 C2orf50Q96LR7 162 aa12.05□□□□□ -0.48
PHGDH-205ENST00000482968 TMEM140Q9NV12 185 aa12.05□□□□□ -0.48
PHGDH-205ENST00000482968 NSG2Q9Y328 171 aa12.05□□□□□ -0.48
PHGDH-205ENST00000482968 RAB19A4D1S5 217 aa12.05□□□□□ -0.48
PHGDH-205ENST00000482968 APOC3P02656 99 aa12.05□□□□□ -0.48
PHGDH-205ENST00000482968 SRP14P37108 136 aaKnown RBP12.05□□□□□ -0.48
PHGDH-205ENST00000482968 F2RL1P55085 397 aa12.05□□□□□ -0.48
PHGDH-205ENST00000482968 OR4A47Q6IF82 309 aa12.05□□□□□ -0.48
PHGDH-205ENST00000482968 CACNG5Q9UF02 275 aa12.05□□□□□ -0.48
PHGDH-205ENST00000482968 TRAV3A0A0B4J244 114 aa12.04□□□□□ -0.48
PHGDH-205ENST00000482968 BCL2L11O43521 198 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms