RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 ANKRD20A5PA0PJZ0 165 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 MPPED1O15442 326 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 KBTBD11O94819 623 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 S1PR2O95136 353 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 IGLV1-40P01703 118 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 NQO2P16083 231 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 F2RP25116 425 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 CD40LGP29965 261 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 SLC6A1P30531 599 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 LPAR6P43657 344 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 TAS2R31P59538 309 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 ERVK-16P61578 105 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 SSBP2P81877 361 aaPredicted RBP6.85□□□□□ -1.31
SNX4-205ENST00000482965 MRGPRG-AS1Q2M3A8 158 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 SPANXN2Q5MJ10 180 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 FOXB2Q5VYV0 432 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 FAAP20Q6NZ36 180 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 C8orf86Q6ZUL3 223 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 TBC1D26Q86UD7 250 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 CCDC190Q86UF4 302 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 PUSL1Q8N0Z8 303 aaKnown RBP6.85□□□□□ -1.31
SNX4-205ENST00000482965 DMBX1Q8NFW5 382 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 OR4C16Q8NGL9 310 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 OR5M8Q8NGP6 311 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 TERB2Q8NHR7 220 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 TMEM167AQ8TBQ9 72 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 ZFAND1Q8TCF1 268 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 SRSF12Q8WXF0 261 aaKnown RBP6.85□□□□□ -1.31
SNX4-205ENST00000482965 ZNF486Q96H40 463 aaPredicted RBP6.85□□□□□ -1.31
SNX4-205ENST00000482965 TMEM68Q96MH6 324 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 THAP7Q9BT49 309 aaPredicted RBP6.85□□□□□ -1.31
SNX4-205ENST00000482965 KLK15Q9H2R5 256 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 PLEKHA2Q9HB19 425 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 HRASLSQ9HDD0 168 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 SLC2A9Q9NRM0 540 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 ZNF355PQ9NSJ1 428 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 COMMD9Q9P000 198 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 V9GYH0 126 aa6.85□□□□□ -1.31
SNX4-205ENST00000482965 MSGN1A6NI15 193 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 SOX15O60248 233 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 ZNF735P0CB33 412 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 APELAP0DMC3 54 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 RPA2P15927 270 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 PI3P19957 117 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 CD33P20138 364 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 PTBP1P26599 531 aaKnown RBP eCLIP6.84□□□□□ -1.31
SNX4-205ENST00000482965 MAS1LP35410 378 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 ECI1P42126 302 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 RPL27AP46776 148 aaKnown RBP6.84□□□□□ -1.31
SNX4-205ENST00000482965 CDX1P47902 265 aaPredicted RBP6.84□□□□□ -1.31
SNX4-205ENST00000482965 RAB9AP51151 201 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 PIGPP57054 158 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 TPPP2P59282 170 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 RND3P61587 244 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 RPL8P62917 257 aaKnown RBP6.84□□□□□ -1.31
SNX4-205ENST00000482965 POU2AF1Q16633 256 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 C10orf55Q5SWW7 151 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 OR4A47Q6IF82 309 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 Q8N402 240 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 ZNF491Q8N8L2 437 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 CCDC71LQ8N9Z2 235 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 OR5T1Q8NG75 326 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 OR6Q1Q8NGQ2 317 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 OR13C8Q8NGS7 320 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 OR4A5Q8NH83 315 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 MARCH1Q8TCQ1 289 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 MYOZ3Q8TDC0 251 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 CASTOR1Q8WTX7 329 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 MS4A10Q96PG2 267 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 SPIN2AQ99865 258 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 PRRT1Q99946 306 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 SPIN2BQ9BPZ2 258 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 TMEM140Q9NV12 185 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 MCUBQ9NWR8 336 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 BET1LQ9NYM9 111 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 COPZ2Q9P299 210 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 C14orf166Q9Y224 244 aaKnown RBP6.84□□□□□ -1.31
SNX4-205ENST00000482965 VSIG4Q9Y279 399 aa6.84□□□□□ -1.31
SNX4-205ENST00000482965 MARCH11A6NNE9 402 aa6.83□□□□□ -1.32
SNX4-205ENST00000482965 UPK2O00526 184 aa6.83□□□□□ -1.32
SNX4-205ENST00000482965 TRGV3P03979 118 aa6.83□□□□□ -1.32
SNX4-205ENST00000482965 CTSDP07339 412 aaPredicted RBP6.83□□□□□ -1.32
SNX4-205ENST00000482965 HLA-GP17693 338 aa6.83□□□□□ -1.32
SNX4-205ENST00000482965 FAUP35544 74 aaKnown RBP6.83□□□□□ -1.32
SNX4-205ENST00000482965 MYCNOSP40205 109 aa6.83□□□□□ -1.32
SNX4-205ENST00000482965 ETV6P41212 452 aa6.83□□□□□ -1.32
SNX4-205ENST00000482965 AP3S2P59780 193 aa6.83□□□□□ -1.32
SNX4-205ENST00000482965 KIAA0141Q14154 515 aaPredicted RBP6.83□□□□□ -1.32
SNX4-205ENST00000482965 ZNF79Q15937 498 aa6.83□□□□□ -1.32
SNX4-205ENST00000482965 DEFB136Q30KP8 78 aa6.83□□□□□ -1.32
SNX4-205ENST00000482965 ZNF585BQ52M93 769 aa6.83□□□□□ -1.32
SNX4-205ENST00000482965 ASPHD1Q5U4P2 390 aa6.83□□□□□ -1.32
SNX4-205ENST00000482965 ETV3LQ6ZN32 361 aa6.83□□□□□ -1.32
SNX4-205ENST00000482965 TOMM5Q8N4H5 51 aa6.83□□□□□ -1.32
SNX4-205ENST00000482965 OR51S1Q8NGJ8 323 aa6.83□□□□□ -1.32
SNX4-205ENST00000482965 C4orf3Q8WVX3 66 aa6.83□□□□□ -1.32
SNX4-205ENST00000482965 TRIM63Q969Q1 353 aa6.83□□□□□ -1.32
SNX4-205ENST00000482965 UBE2E2Q96LR5 201 aa6.83□□□□□ -1.32
SNX4-205ENST00000482965 DUX3Q96PT4 197 aa6.83□□□□□ -1.32
SNX4-205ENST00000482965 FYTTD1Q96QD9 318 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms