RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 GNB1P62873 340 aa12.31□□□□□ -0.44
ATG4B-220ENST00000482507 RPL39P5Q59GN2 51 aa12.31□□□□□ -0.44
ATG4B-220ENST00000482507 C1orf229Q6ZS94 237 aaPredicted RBP12.31□□□□□ -0.44
ATG4B-220ENST00000482507 TGIF2LYQ8IUE0 185 aa12.31□□□□□ -0.44
ATG4B-220ENST00000482507 SNRNP40Q96DI7 357 aaKnown RBP12.31□□□□□ -0.44
ATG4B-220ENST00000482507 TRAV3A0A0B4J244 114 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 IGHV1-18A0A0C4DH31 117 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 RRHO14718 337 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 GATCO43716 136 aaKnown RBP12.3□□□□□ -0.44
ATG4B-220ENST00000482507 CD1BP29016 333 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 HOXC12P31275 282 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 EDDM3BP56851 147 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 HTD2P86397 168 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 LRP11Q86VZ4 500 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 FAM90A1Q86YD7 464 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 OR1P1Q8NH06 330 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 TMEM170AQ8WVE7 144 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 PRO1933Q9H354 126 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 AQP7O14520 342 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 SPINT2O43291 252 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 IGLV1-44P01699 117 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 GPR12P47775 334 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 ACOT6Q3I5F7 207 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-220ENST00000482507 AARDQ4LEZ3 155 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 MORN2Q502X0 79 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 ZNF114Q8NC26 417 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 OR5B12Q96R08 314 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 PRORYQ9H606 182 aa12.3□□□□□ -0.44
ATG4B-220ENST00000482507 PATZ1Q9HBE1 687 aaKnown RBP12.3□□□□□ -0.44
ATG4B-220ENST00000482507 IGHV3OR15-7A0A075B7D8 119 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 PPP5D1E7EU14 171 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 CHRNA7P36544 502 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 RPRMLQ8N4K4 120 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 OR2Z1Q8NG97 314 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 S100PBPQ96BU1 408 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 C14orf144Q96I85 54 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 CACNA1BQ00975 2339 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 SMCO3A2RU48 225 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 XKRY2A2RUG3 117 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 PGPEP1LA6NFU8 196 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 PRSS46E5RG02 174 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 C17orf112F2Z3M2 114 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 GGCTO75223 188 aaKnown RBP12.29□□□□□ -0.44
ATG4B-220ENST00000482507 CRYABP02511 175 aaKnown RBP12.29□□□□□ -0.44
ATG4B-220ENST00000482507 ADH4P08319 380 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 FAM3BP58499 235 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-220ENST00000482507 ZNF718Q3SXZ3 478 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 DNLZQ5SXM8 178 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 LINC01551Q86U37 167 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 SARAFQ96BY9 339 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 C1orf159Q96HA4 380 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 OPN3Q9H1Y3 402 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-220ENST00000482507 GNG12Q9UBI6 72 aa12.29□□□□□ -0.44
ATG4B-220ENST00000482507 A0A1B0GWJ7 208 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 M0R1X1 148 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 GCH1P30793 250 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 VDAC2P45880 294 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-220ENST00000482507 LOXL3P58215 753 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 PAX5Q02548 391 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 COA6Q5JTJ3 125 aaKnown RBP12.28□□□□□ -0.44
ATG4B-220ENST00000482507 ACTL10Q5JWF8 245 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 PRAMEF5Q5TYX0 476 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 MBNL2Q5VZF2 373 aaKnown RBP12.28□□□□□ -0.44
ATG4B-220ENST00000482507 TREML4Q6UXN2 200 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 OR2T10Q8NGZ9 312 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 TMEM37Q8WXS4 190 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 ANAPC16Q96DE5 110 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 DUSP13Q9UII6 198 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 FUT9Q9Y231 359 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 HCFC1P51610 2035 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 COL6A6A6NMZ7 2263 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 USP24Q9UPU5 2620 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 EPG5Q9HCE0 2579 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 SLC31A2O15432 143 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 NDUFB4O95168 129 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 VENTXO95231 258 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 IFNA10P01566 189 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 DEFA6Q01524 100 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 ABHD12Q8N2K0 398 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 ZNRF1Q8ND25 227 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 C1orf162Q8NEQ5 155 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-220ENST00000482507 MGST2Q99735 147 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 IFI27L2Q9H2X8 130 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 MS4A5Q9H3V2 200 aa12.28□□□□□ -0.44
ATG4B-220ENST00000482507 TET2Q6N021 2002 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-220ENST00000482507 TNFSF13O75888 250 aa12.27□□□□□ -0.44
ATG4B-220ENST00000482507 HPRT1P00492 218 aa12.27□□□□□ -0.44
ATG4B-220ENST00000482507 GZMBP10144 247 aa12.27□□□□□ -0.44
ATG4B-220ENST00000482507 RELBQ01201 579 aa12.27□□□□□ -0.44
ATG4B-220ENST00000482507 CST9LP1Q5W188 147 aa12.27□□□□□ -0.44
ATG4B-220ENST00000482507 LEAP2Q969E1 77 aa12.27□□□□□ -0.44
ATG4B-220ENST00000482507 TMEM204Q9BSN7 226 aa12.27□□□□□ -0.44
ATG4B-220ENST00000482507 SH3BGRL2Q9UJC5 107 aa12.27□□□□□ -0.44
ATG4B-220ENST00000482507 ZFYVE26Q68DK2 2539 aa12.27□□□□□ -0.45
ATG4B-220ENST00000482507 TRBV20OR9-2A0A075B6H5 130 aa12.27□□□□□ -0.45
ATG4B-220ENST00000482507 SRRM5B3KS81 715 aa12.27□□□□□ -0.45
ATG4B-220ENST00000482507 SPCS3P61009 180 aa12.27□□□□□ -0.45
ATG4B-220ENST00000482507 JOSD1Q15040 202 aaPredicted RBP12.27□□□□□ -0.45
ATG4B-220ENST00000482507 MIC13Q5XKP0 118 aa12.27□□□□□ -0.45
ATG4B-220ENST00000482507 GCSAMQ8N6F7 178 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms