RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ZNF706Q9Y5V0 76 aaPredicted RBP3.07□□□□□ -1.92
VPS41-212ENST00000482217 SLC25A15Q9Y619 301 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 HSPE1-MOB4S4R3N1 261 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 TONSLQ96HA7 1378 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 PRG4Q92954 1404 aaPredicted RBP3.07□□□□□ -1.92
VPS41-212ENST00000482217 ZFYVE16Q7Z3T8 1539 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 NLRC5Q86WI3 1866 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 MYH7BA7E2Y1 1941 aa3.07□□□□□ -1.92
VPS41-212ENST00000482217 TMEM212A6NML5 194 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 ZSWIM8A7E2V4 1837 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 F5H5P2 479 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 CCDC179H3BU77 68 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 I3L521 148 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 PIRO00625 290 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 CHD1O14646 1710 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 FSTL3O95633 263 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 ADRA2AP08913 450 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 BCL2P10415 239 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 PZPP20742 1482 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 CCR2P41597 374 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 INSL3P51460 131 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 TAS2R20P59543 309 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 RHOGP84095 191 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 GON4LQ3T8J9 2241 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 BCL2L15Q5TBC7 163 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 LYRM7Q5U5X0 104 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 TMEM244Q5VVB8 128 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 DENND4CQ5VZ89 1909 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 ZNF773Q6PK81 442 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 ZNF584Q8IVC4 421 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 MKXQ8IYA7 352 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 C1orf174Q8IYL3 243 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.06□□□□□ -1.92
VPS41-212ENST00000482217 NUP35Q8NFH5 326 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 OR11G2Q8NGC1 345 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 OR52R1Q8NGF1 315 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 NAT14Q8WUY8 206 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 TAF15Q92804 592 aaKnown RBP eCLIP3.06□□□□□ -1.92
VPS41-212ENST00000482217 PEBP4Q96S96 227 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 NMNAT3Q96T66 252 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 NRIP2Q9BQI9 281 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 PRO1933Q9H354 126 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 OTORQ9NRC9 128 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 CCL28Q9NRJ3 127 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 TMEM2Q9UHN6 1383 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 TRMT112Q9UI30 125 aaKnown RBP3.06□□□□□ -1.92
VPS41-212ENST00000482217 SCP2D1Q9UJQ7 156 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 THSD7AQ9UPZ6 1657 aa3.06□□□□□ -1.92
VPS41-212ENST00000482217 CROCCQ5TZA2 2017 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 SIGLEC1Q9BZZ2 1709 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 COL5A2P05997 1499 aaPredicted RBP3.05□□□□□ -1.92
VPS41-212ENST00000482217 CCDC18Q5T9S5 1454 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 TRBV19A0A075B6N1 114 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 TRAV8-1A0A0A6YYK1 113 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 TRAV5A0A0B4J249 113 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 RPL37AP8A6NKH3 93 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 A8MUN3 132 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 K7EPK0 472 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 M0R1X1 148 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 LST1O00453 97 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 NPFFO15130 113 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 ANGPTL7O43827 346 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 TBL1XO60907 577 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 ZNF780AO75290 641 aaPredicted RBP3.05□□□□□ -1.92
VPS41-212ENST00000482217 SNAPC5O75971 98 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 MAS1P04201 325 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 ZNF728P0DKX0 622 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 IGHV3-43DP0DP04 118 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 CTSEP14091 401 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 SPRP35270 261 aaPredicted RBP3.05□□□□□ -1.92
VPS41-212ENST00000482217 DAPP51397 102 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 CRIP2P52943 208 aaPredicted RBP3.05□□□□□ -1.92
VPS41-212ENST00000482217 S100A10P60903 97 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 RPS11P62280 158 aaKnown RBP eCLIP3.05□□□□□ -1.92
VPS41-212ENST00000482217 GRB2P62993 217 aaKnown RBP3.05□□□□□ -1.92
VPS41-212ENST00000482217 FKBP3Q00688 224 aaKnown RBP3.05□□□□□ -1.92
VPS41-212ENST00000482217 GNA12Q03113 381 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 ZNF146Q15072 292 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 ELOCQ15369 112 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 GUCA2BQ16661 112 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 COL5A1-AS1Q5SY13 56 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 ADAMTSL4-AS1Q5T5F5 129 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 TMEM14EPQ6UXP3 125 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 ZNF767PQ75MW2 155 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 WDR86Q86TI4 376 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 LINC00596Q86U02 117 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 LINC00471Q8N535 108 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 NKAPP1Q8N9T2 125 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 OR2M3Q8NG83 312 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 OR10D4PQ8NGN7 298 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 ZNF721Q8TF20 911 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 PP6455Q8WZ26 134 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 BORCS8Q96FH0 119 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 DERL3Q96Q80 235 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 GPX7Q96SL4 187 aaPredicted RBP3.05□□□□□ -1.92
VPS41-212ENST00000482217 TM2D3Q9BRN9 247 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 MRPL20Q9BYC9 149 aaKnown RBP3.05□□□□□ -1.92
VPS41-212ENST00000482217 FGF22Q9HCT0 170 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 FBXL12Q9NXK8 326 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 TP73-AS1Q9UF72 201 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms