RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 SFXN4Q6P4A7 337 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 COMMD7Q86VX2 200 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 TMEM86BQ8N661 226 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 OR8J3Q8NGG0 315 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 OR52E4Q8NGH9 312 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 SLC37A2Q8TED4 501 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 GALMQ96C23 342 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 C12orf43Q96C57 262 aaKnown RBP2.27□□□□□ -2.05
SF3B1-210ENST00000482158 PPCDCQ96CD2 204 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 SMIM12Q96EX1 92 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 ANKRD36BP1Q96IX9 119 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 DKKL1Q9UK85 242 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 SLC35A3Q9Y2D2 325 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 PRELID3BQ9Y3B1 194 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 VWDEQ8N2E2 1590 aa2.27□□□□□ -2.05
SF3B1-210ENST00000482158 ITGB4P16144 1822 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 RTL9Q8NET4 1388 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 LOC102725191A0A1B0GVB3 256 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 FAM159BA6NKW6 160 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 EVPLLA8MZ36 301 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 BHLHE40O14503 412 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 OR10J4P0C629 311 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 MYL12AP19105 171 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 S100GP29377 79 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 GABRA3P34903 492 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 NAA20P61599 178 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 DEFA6Q01524 100 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 BSPH1Q075Z2 132 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 ACSBG2Q5FVE4 666 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 HIST2H3PS2Q5TEC6 136 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 FAM78BQ5VT40 261 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 XKRXQ6PP77 449 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 C4orf22Q6V702 233 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 OR4P4Q8NGL7 312 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 OR5C1Q8NGR4 320 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 OR1L8Q8NGR8 309 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 TNFAIP8L1Q8WVP5 186 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 TBX5Q99593 518 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 C2orf88Q9BSF0 95 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 CHST5Q9GZS9 411 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 COMMD9Q9P000 198 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 HSPB11Q9Y547 144 aa2.26□□□□□ -2.05
SF3B1-210ENST00000482158 PIK3C2GO75747 1445 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 SETD5Q9C0A6 1442 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 BAHCC1Q9P281 2608 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 ZNF106Q9H2Y7 1883 aaKnown RBP2.25□□□□□ -2.05
SF3B1-210ENST00000482158 EXOC1LA0A1B0GW35 172 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 TP53I11O14683 189 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 ATG12O94817 140 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 MT-CO2P00403 227 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 SERPINA7P05543 415 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 CRYGDP07320 174 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 ESDP10768 282 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 CD99P14209 185 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 HIST1H1TP22492 207 aaPredicted RBP2.25□□□□□ -2.05
SF3B1-210ENST00000482158 ERP29P30040 261 aaKnown RBP2.25□□□□□ -2.05
SF3B1-210ENST00000482158 RCVRNP35243 200 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 SMAGPQ0VAQ4 97 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 WHAMMP3Q1A5X7 153 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 CLEC12BQ2HXU8 276 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 SMIM21Q3B7S5 101 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 FAM229BQ4G0N7 80 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 CENPWQ5EE01 88 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 OR10K2Q6IF99 312 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 TNFAIP8L2Q6P589 184 aaPredicted RBP2.25□□□□□ -2.05
SF3B1-210ENST00000482158 ZNF322Q6U7Q0 402 aaPredicted RBP2.25□□□□□ -2.05
SF3B1-210ENST00000482158 RASSF6Q6ZTQ3 369 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 OR4X1Q8NH49 305 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 BTF3L4Q96K17 158 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 C12orf57Q99622 126 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 CMSS1Q9BQ75 279 aaKnown RBP2.25□□□□□ -2.05
SF3B1-210ENST00000482158 GINS3Q9BRX5 216 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 DCSTAMPQ9H295 470 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 TUBA4BQ9H853 241 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 NMNAT1Q9HAN9 279 aaPredicted RBP2.25□□□□□ -2.05
SF3B1-210ENST00000482158 ENY2Q9NPA8 101 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 IDI2-AS1Q9NZ38 188 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 OPTCQ9UBM4 332 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 SS18L2Q9UHA2 77 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.25□□□□□ -2.05
SF3B1-210ENST00000482158 LSM5Q9Y4Y9 91 aaKnown RBP2.25□□□□□ -2.05
SF3B1-210ENST00000482158 HEY1Q9Y5J3 304 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 TRIOBPQ9H2D6 2365 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 ATG2BQ96BY7 2078 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 ARAP1Q96P48 1450 aa2.25□□□□□ -2.05
SF3B1-210ENST00000482158 PLXNA3P51805 1871 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 A8MWP6 167 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 B4DEV8 164 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 K7EP13 123 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 DLEU1O43261 78 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 STK16O75716 305 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 OR7C1O76099 320 aaPredicted RBP2.24□□□□□ -2.05
SF3B1-210ENST00000482158 HTR1AP08908 422 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 FBP1P09467 338 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 OR13C7P0DN81 318 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 OGNP20774 298 aaKnown RBP2.24□□□□□ -2.05
SF3B1-210ENST00000482158 S100PP25815 95 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 S100A7P31151 101 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 AKR1C3P42330 323 aa2.24□□□□□ -2.05
SF3B1-210ENST00000482158 REG1BP48304 166 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms