RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 SHPKQ9UHJ6 478 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 RAB22AQ9UL26 194 aa2.36□□□□□ -2.03
SMC6-208ENST00000481708 ZNF706Q9Y5V0 76 aaPredicted RBP2.36□□□□□ -2.03
SMC6-208ENST00000481708 ICE1Q9Y2F5 2266 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 A0A0J9YXY3 114 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 EEF1E1-BLOC1S5C9J1V9 151 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 PHYHO14832 338 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 EEF1E1O43324 174 aaKnown RBP2.35□□□□□ -2.03
SMC6-208ENST00000481708 TBL1XO60907 577 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 CCNKO75909 580 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 F2RP25116 425 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 ZNF140P52738 457 aaPredicted RBP2.35□□□□□ -2.03
SMC6-208ENST00000481708 RAB4BP61018 213 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 PRDX4Q13162 271 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 NRF1Q16656 503 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 ZNF585BQ52M93 769 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 ZNF493Q6ZR52 646 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 ZNF550Q7Z398 422 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 CEND1Q8N111 149 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 PEBP4Q96S96 227 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 TRIM4Q9C037 500 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 JPT2Q9H910 190 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 A0A1W2PPR1 153 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 A0A1W2PRG6 482 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 WI2-2373I1.2A0A1W2PRP0 233 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 PRORSD1PA6NEY8 169 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 DNASE2O00115 360 aaPredicted RBP2.35□□□□□ -2.03
SMC6-208ENST00000481708 FAAHO00519 579 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 LMX1BO60663 402 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 TNFP01375 233 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 IL3RAP26951 378 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 GLRXP35754 106 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 CDKN2AP42771 156 aaKnown RBP2.35□□□□□ -2.03
SMC6-208ENST00000481708 NOTCH1P46531 2555 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 KIAA0040Q15053 153 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 SURF2Q15527 256 aaPredicted RBP2.35□□□□□ -2.03
SMC6-208ENST00000481708 HIST3H3Q16695 136 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 CCDC153Q494R4 210 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 ZNF497Q6ZNH5 498 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 SLC35G3Q8N808 338 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 OR2G3Q8NGZ4 309 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 OR4K3Q96R72 315 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 PHB2Q99623 299 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 TSSK6Q9BXA6 273 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 KRTAP9-8Q9BYQ0 159 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 FAM32AQ9Y421 112 aaKnown RBP2.35□□□□□ -2.03
SMC6-208ENST00000481708 SNX10Q9Y5X0 201 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 NBEAL1Q6ZS30 2694 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 ARL6IP5O75915 188 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 TTRP02766 147 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 IL3P08700 152 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 ERVFC1-1P60608 527 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 SPCS2Q15005 226 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 ZNF239Q16600 458 aaKnown RBP2.35□□□□□ -2.03
SMC6-208ENST00000481708 ADM2Q7Z4H4 148 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 UCN3Q969E3 161 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 RMND5BQ96G75 393 aaPredicted RBP2.35□□□□□ -2.03
SMC6-208ENST00000481708 SFRP2Q96HF1 295 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 CARD19Q96LW7 228 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 ENY2Q9NPA8 101 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 POLR1DQ9Y2S0 133 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 FAM215AQ9Y5M1 114 aa2.35□□□□□ -2.03
SMC6-208ENST00000481708 KIAA1109Q2LD37 5005 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 FAM72CH0Y354 149 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 IFNA1P01562 189 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 CTLA4P16410 223 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 LINC00313P59037 77 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 RPL23P62829 140 aaKnown RBP2.34□□□□□ -2.03
SMC6-208ENST00000481708 TMEM267Q0VDI3 215 aaPredicted RBP2.34□□□□□ -2.03
SMC6-208ENST00000481708 ERCC8Q13216 396 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 HIST2H3PS2Q5TEC6 136 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 FAM72AQ5TYM5 149 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 RSBN1Q5VWQ0 802 aaPredicted RBP2.34□□□□□ -2.03
SMC6-208ENST00000481708 FAM72DQ6L9T8 149 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 ZNF429Q86V71 674 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 FAM72BQ86X60 149 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 DHFR2Q86XF0 187 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 COX18Q8N8Q8 333 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 SMIM12Q96EX1 92 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 ZC2HC1AQ96GY0 325 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 RILPQ96NA2 401 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 ZNF2Q9BSG1 426 aaPredicted RBP2.34□□□□□ -2.03
SMC6-208ENST00000481708 RNF122Q9H9V4 155 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 PARVAQ9NVD7 372 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 MED29Q9NX70 200 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 TAS2R1Q9NYW7 299 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 ASB4Q9Y574 426 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 RFNGQ9Y644 331 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 TMED7-TICAM2A0A0A6YYA0 188 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 BHLHE40O14503 412 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 THBS3P49746 956 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 SLC35A2P78381 396 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 MS4A2Q01362 244 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 EMX1Q04741 257 aaPredicted RBP2.34□□□□□ -2.03
SMC6-208ENST00000481708 ADIGQ0VDE8 80 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 ARHGAP11BQ3KRB8 267 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 KRTAP24-1Q3LI83 254 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 CENPWQ5EE01 88 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 LPCAT3Q6P1A2 487 aa2.34□□□□□ -2.03
SMC6-208ENST00000481708 KCTD4Q8WVF5 259 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms