RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 BMPR1BO00238 502 aa9.23□□□□□ -0.93
SQSTM1-207ENST00000481335 TRBV12-3P01733 135 aa9.23□□□□□ -0.93
SQSTM1-207ENST00000481335 CRYGCP07315 174 aa9.23□□□□□ -0.93
SQSTM1-207ENST00000481335 ZNF735P0CB33 412 aa9.23□□□□□ -0.93
SQSTM1-207ENST00000481335 APELAP0DMC3 54 aa9.23□□□□□ -0.93
SQSTM1-207ENST00000481335 HIST1H1BP16401 226 aaKnown RBP9.23□□□□□ -0.93
SQSTM1-207ENST00000481335 RPL27AP46776 148 aaKnown RBP9.23□□□□□ -0.93
SQSTM1-207ENST00000481335 MECP2P51608 486 aaKnown RBP9.23□□□□□ -0.93
SQSTM1-207ENST00000481335 ZNF45Q02386 682 aa9.23□□□□□ -0.93
SQSTM1-207ENST00000481335 CATR1Q13166 79 aa9.23□□□□□ -0.93
SQSTM1-207ENST00000481335 C15orf32Q32M92 178 aa9.23□□□□□ -0.93
SQSTM1-207ENST00000481335 CASC10Q5T4H9 136 aa9.23□□□□□ -0.93
SQSTM1-207ENST00000481335 HAPLN4Q86UW8 402 aa9.23□□□□□ -0.93
SQSTM1-207ENST00000481335 OR13F1Q8NGS4 319 aa9.23□□□□□ -0.93
SQSTM1-207ENST00000481335 SPATA25Q9BR10 227 aa9.23□□□□□ -0.93
SQSTM1-207ENST00000481335 SRSF8Q9BRL6 282 aaKnown RBP9.23□□□□□ -0.93
SQSTM1-207ENST00000481335 SLC2A9Q9NRM0 540 aa9.23□□□□□ -0.93
SQSTM1-207ENST00000481335 DPPA5A6NC42 116 aa9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 J3QRK9 145 aa9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 LGALS9O00182 355 aa9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 GGCTO75223 188 aaKnown RBP9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 RBMXL2O75526 392 aaKnown RBP9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 PPYP01298 95 aa9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 FCGR2CP31995 323 aa9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 TAS2R31P59538 309 aa9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 RPL8P62917 257 aaKnown RBP9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 DEFA5Q01523 94 aa9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 MXD1Q05195 221 aa9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 POU2AF1Q16633 256 aa9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 OR2B11Q5JQS5 317 aa9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 C10orf55Q5SWW7 151 aa9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 IDNKQ5T6J7 187 aa9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 THOC7Q6I9Y2 204 aaKnown RBP9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 CD300LFQ8TDQ1 290 aa9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 FYTTD1Q96QD9 318 aaKnown RBP9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 TAS2R8Q9NYW2 309 aa9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 TECRQ9NZ01 308 aaKnown RBP9.22□□□□□ -0.93
SQSTM1-207ENST00000481335 TRAV18A0A075B6X5 111 aa9.21□□□□□ -0.94
SQSTM1-207ENST00000481335 LOC100506127A0A0U1RQW1 187 aa9.21□□□□□ -0.94
SQSTM1-207ENST00000481335 HPRT1P00492 218 aa9.21□□□□□ -0.94
SQSTM1-207ENST00000481335 CTRB1P17538 263 aa9.21□□□□□ -0.94
SQSTM1-207ENST00000481335 BRWD1-AS2P59051 145 aa9.21□□□□□ -0.94
SQSTM1-207ENST00000481335 CTRB2Q6GPI1 263 aa9.21□□□□□ -0.94
SQSTM1-207ENST00000481335 GPHB5Q86YW7 130 aa9.21□□□□□ -0.94
SQSTM1-207ENST00000481335 VKORC1L1Q8N0U8 176 aa9.21□□□□□ -0.94
SQSTM1-207ENST00000481335 OR5AP2Q8NGF4 316 aa9.21□□□□□ -0.94
SQSTM1-207ENST00000481335 OR5H6Q8NGV6 325 aa9.21□□□□□ -0.94
SQSTM1-207ENST00000481335 SECTM1Q8WVN6 248 aa9.21□□□□□ -0.94
SQSTM1-207ENST00000481335 GIMAP1Q8WWP7 306 aa9.21□□□□□ -0.94
SQSTM1-207ENST00000481335 ISOC1Q96CN7 298 aa9.21□□□□□ -0.94
SQSTM1-207ENST00000481335 AUNIPQ9H7T9 357 aa9.21□□□□□ -0.94
SQSTM1-207ENST00000481335 ZC4H2Q9NQZ6 224 aa9.21□□□□□ -0.94
SQSTM1-207ENST00000481335 TRBV7-1A0A0A6YYK4 115 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 A8MWP6 167 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 XRCC3O43542 346 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 OR2J3O76001 311 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 PRH1P02810 166 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 IL6RP08887 468 aaPredicted RBP9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 LYL1P12980 280 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 NQO2P16083 231 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 HLA-GP17693 338 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 PSMB6P28072 239 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 NEDD8Q15843 81 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 HSD17B13Q7Z5P4 300 aaPredicted RBP9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 CADM3Q8N126 398 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 GVQW1Q8N7I0 195 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 DYNLRB2Q8TF09 96 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 EEF1AKMT3Q96AZ1 226 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 S100A16Q96FQ6 103 aaKnown RBP9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 CXorf58Q96LI9 332 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 TUBA4BQ9H853 241 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 PLEKHA2Q9HB19 425 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 PALMDQ9NP74 551 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 SLC2A8Q9NY64 477 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 COMMD9Q9P000 198 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 FBXL7Q9UJT9 491 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 ADAM30Q9UKF2 790 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 CSMD3Q7Z407 3707 aa9.2□□□□□ -0.94
SQSTM1-207ENST00000481335 HMX3A6NHT5 357 aa9.19□□□□□ -0.94
SQSTM1-207ENST00000481335 CYB5BO43169 146 aa9.19□□□□□ -0.94
SQSTM1-207ENST00000481335 IFNA6P05013 189 aa9.19□□□□□ -0.94
SQSTM1-207ENST00000481335 CLEC2LP0C7M8 214 aa9.19□□□□□ -0.94
SQSTM1-207ENST00000481335 UBE2NLQ5JXB2 153 aa9.19□□□□□ -0.94
SQSTM1-207ENST00000481335 OR4A47Q6IF82 309 aa9.19□□□□□ -0.94
SQSTM1-207ENST00000481335 SPAG16Q8N0X2 631 aa9.19□□□□□ -0.94
SQSTM1-207ENST00000481335 FANCD2OSQ96PS1 177 aa9.19□□□□□ -0.94
SQSTM1-207ENST00000481335 SLC5A7Q9GZV3 580 aa9.19□□□□□ -0.94
SQSTM1-207ENST00000481335 RNF167Q9H6Y7 350 aa9.19□□□□□ -0.94
SQSTM1-207ENST00000481335 EDA2RQ9HAV5 297 aa9.19□□□□□ -0.94
SQSTM1-207ENST00000481335 VCX3AQ9NNX9 186 aa9.19□□□□□ -0.94
SQSTM1-207ENST00000481335 CCL28Q9NRJ3 127 aa9.19□□□□□ -0.94
SQSTM1-207ENST00000481335 THYN1Q9P016 225 aa9.19□□□□□ -0.94
SQSTM1-207ENST00000481335 ANAPC10Q9UM13 185 aa9.19□□□□□ -0.94
SQSTM1-207ENST00000481335 DMRT1Q9Y5R6 373 aa9.19□□□□□ -0.94
SQSTM1-207ENST00000481335 IGLV11-55A0A075B6I3 123 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 A0A1B0GW64 132 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 C2orf70A6NJV1 201 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 E7EUB6 86 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 TNFSF12O43508 249 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 TPPPO94811 219 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms