RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 F2RP25116 425 aa9.66□□□□□ -0.86
PTPRF-213ENST00000481019 ARSJQ5FYB0 599 aaPredicted RBP9.66□□□□□ -0.86
PTPRF-213ENST00000481019 TBC1D26Q86UD7 250 aa9.66□□□□□ -0.86
PTPRF-213ENST00000481019 FAM71E2Q8N5Q1 922 aa9.66□□□□□ -0.86
PTPRF-213ENST00000481019 LRTM2Q8N967 370 aa9.66□□□□□ -0.86
PTPRF-213ENST00000481019 CASTOR1Q8WTX7 329 aa9.66□□□□□ -0.86
PTPRF-213ENST00000481019 TMEM230Q96A57 120 aa9.66□□□□□ -0.86
PTPRF-213ENST00000481019 AIFM2Q9BRQ8 373 aa9.66□□□□□ -0.86
PTPRF-213ENST00000481019 TET2Q6N021 2002 aaPredicted RBP9.65□□□□□ -0.86
PTPRF-213ENST00000481019 A0A0B4J293 547 aa9.65□□□□□ -0.86
PTPRF-213ENST00000481019 M0QZK8 103 aa9.65□□□□□ -0.86
PTPRF-213ENST00000481019 SULT1A3P0DMM9 295 aa9.65□□□□□ -0.86
PTPRF-213ENST00000481019 SULT1A4P0DMN0 295 aa9.65□□□□□ -0.86
PTPRF-213ENST00000481019 ZNF695Q8IW36 515 aa9.65□□□□□ -0.86
PTPRF-213ENST00000481019 CITED2Q99967 270 aaPredicted RBP9.65□□□□□ -0.86
PTPRF-213ENST00000481019 TMEM222Q9H0R3 208 aa9.65□□□□□ -0.86
PTPRF-213ENST00000481019 ZFP57Q9NU63 452 aa9.65□□□□□ -0.86
PTPRF-213ENST00000481019 SDHAF2Q9NX18 166 aa9.65□□□□□ -0.86
PTPRF-213ENST00000481019 MGAT4CQ9UBM8 478 aa9.65□□□□□ -0.86
PTPRF-213ENST00000481019 TMED3Q9Y3Q3 217 aa9.65□□□□□ -0.86
PTPRF-213ENST00000481019 NOTCH1P46531 2555 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 M0R1X1 148 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 FBXO24O75426 580 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 IGLV2-14P01704 120 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 IGHG2P01859 326 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 IGKV1-16P04430 117 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 OR5AC1P0C628 307 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 RRASP10301 218 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 UCP1P25874 307 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 THBS3P49746 956 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 RAP2BP61225 183 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 SUPT4H1P63272 117 aaKnown RBP9.64□□□□□ -0.87
PTPRF-213ENST00000481019 FGL1Q08830 312 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 TMEM187Q14656 261 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 GSG1LQ6UXU4 331 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 ZNF329Q86UD4 541 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 OR5AU1Q8NGC0 362 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 OR5AN1Q8NGI8 311 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 OR52B4Q8NGK2 314 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 TMEM56Q96MV1 263 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 SPIN2AQ99865 258 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 SPIN2BQ9BPZ2 258 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 CACFD1Q9UGQ2 172 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 TMEM56-RWDD3S4R434 201 aa9.64□□□□□ -0.87
PTPRF-213ENST00000481019 RBFOX2O43251 390 aaKnown RBP eCLIP9.63□□□□□ -0.877e-9■■■□□ 17
PTPRF-213ENST00000481019 CDS2O95674 445 aa9.63□□□□□ -0.87
PTPRF-213ENST00000481019 GIPP09681 153 aaPredicted RBP9.63□□□□□ -0.87
PTPRF-213ENST00000481019 FCN2Q15485 313 aa9.63□□□□□ -0.87
PTPRF-213ENST00000481019 MMDQ15546 238 aa9.63□□□□□ -0.87
PTPRF-213ENST00000481019 NSUN5P1Q3KNT7 163 aa9.63□□□□□ -0.87
PTPRF-213ENST00000481019 SLC35E3Q7Z769 313 aa9.63□□□□□ -0.87
PTPRF-213ENST00000481019 CENPVQ7Z7K6 275 aaPredicted RBP9.63□□□□□ -0.87
PTPRF-213ENST00000481019 NPBQ8NG41 125 aa9.63□□□□□ -0.87
PTPRF-213ENST00000481019 GLYATL2Q8WU03 294 aa9.63□□□□□ -0.87
PTPRF-213ENST00000481019 TCTEX1D2Q8WW35 142 aa9.63□□□□□ -0.87
PTPRF-213ENST00000481019 RBPMSQ93062 196 aaKnown RBP9.63□□□□□ -0.87
PTPRF-213ENST00000481019 PDCD10Q9BUL8 212 aa9.63□□□□□ -0.87
PTPRF-213ENST00000481019 ZNF436Q9C0F3 470 aaPredicted RBP9.63□□□□□ -0.87
PTPRF-213ENST00000481019 COMMD9Q9P000 198 aa9.63□□□□□ -0.87
PTPRF-213ENST00000481019 PLXNB1O43157 2135 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 A0A1W2PRX2 142 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 C5orf51A6NDU8 294 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 DBX1A6NMT0 343 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 LINC00473A8K010 186 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 FCN1O00602 326 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 TNFSF12O43508 249 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 NDUFA3O95167 84 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 VDAC1P21796 283 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 MC5RP33032 325 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 DUTP33316 252 aaKnown RBP9.62□□□□□ -0.87
PTPRF-213ENST00000481019 NDPQ00604 133 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 CD83Q01151 205 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 RTL8BQ17RB0 113 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 TREML4Q6UXN2 200 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 C18orf65Q6ZTR6 163 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 FAM219AQ8IW50 185 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 TCTE3Q8IZS6 198 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 OR5M8Q8NGP6 311 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 OR51H1Q8NH63 302 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 FAM110DQ8TAY7 271 aaPredicted RBP9.62□□□□□ -0.87
PTPRF-213ENST00000481019 RRNAD1Q96FB5 475 aaKnown RBP9.62□□□□□ -0.87
PTPRF-213ENST00000481019 GPHA2Q96T91 129 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 RASL11BQ9BPW5 248 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 NEURL2Q9BR09 285 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 FBXL15Q9H469 300 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 TPSG1Q9NRR2 321 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 WASHC3Q9Y3C0 194 aa9.62□□□□□ -0.87
PTPRF-213ENST00000481019 PRKDCP78527 4128 aaKnown RBP9.61□□□□□ -0.87
PTPRF-213ENST00000481019 IGHV7-81A0A0B4J1V7 117 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 H7C2Y5 167 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 M0QZ24 198 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 GOSR2O14653 212 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 NBR2O15453 112 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 OR2A4O95047 310 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 HPRT1P00492 218 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 APOA2P02652 100 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 HNRNPCP07910 306 aaKnown RBP eCLIP9.61□□□□□ -0.87
PTPRF-213ENST00000481019 PET100P0DJ07 73 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 SLC25A6P12236 298 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 RPL30P62888 115 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms