RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 CD300LFQ8TDQ1 290 aa9.42□□□□□ -0.9
CCM2-212ENST00000480382 SRSF12Q8WXF0 261 aaKnown RBP9.42□□□□□ -0.9
CCM2-212ENST00000480382 TRIM63Q969Q1 353 aa9.42□□□□□ -0.9
CCM2-212ENST00000480382 MRGPRFQ96AM1 343 aa9.42□□□□□ -0.9
CCM2-212ENST00000480382 OR2A7Q96R45 310 aa9.42□□□□□ -0.9
CCM2-212ENST00000480382 PHB2Q99623 299 aa9.42□□□□□ -0.9
CCM2-212ENST00000480382 THAP7Q9BT49 309 aaPredicted RBP9.42□□□□□ -0.9
CCM2-212ENST00000480382 KLK15Q9H2R5 256 aa9.42□□□□□ -0.9
CCM2-212ENST00000480382 SLC2A9Q9NRM0 540 aa9.42□□□□□ -0.9
CCM2-212ENST00000480382 ZFP57Q9NU63 452 aa9.42□□□□□ -0.9
CCM2-212ENST00000480382 MEGF8Q7Z7M0 2845 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 DISC1C4P0D8 188 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 ACTL6BO94805 426 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 PF4P02776 101 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 RPA2P15927 270 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 NQO2P16083 231 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 SPANXN2Q5MJ10 180 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 ASPHD1Q5U4P2 390 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 ETV3LQ6ZN32 361 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 ZNF695Q8IW36 515 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 Q8N402 240 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 OR13C8Q8NGS7 320 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 TERB2Q8NHR7 220 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 TMEM167AQ8TBQ9 72 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 MARCH1Q8TCQ1 289 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 MYOZ3Q8TDC0 251 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 ZNF486Q96H40 463 aaPredicted RBP9.41□□□□□ -0.9
CCM2-212ENST00000480382 DUX3Q96PT4 197 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 PLEKHA2Q9HB19 425 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 COMMD9Q9P000 198 aa9.41□□□□□ -0.9
CCM2-212ENST00000480382 MSGN1A6NI15 193 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 MARCH11A6NNE9 402 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 MYOD1P15172 320 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 PTBP1P26599 531 aaKnown RBP eCLIP9.4□□□□□ -0.9
CCM2-212ENST00000480382 ETV6P41212 452 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 LPAR6P43657 344 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 RAB9AP51151 201 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 PIGPP57054 158 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 RND3P61587 244 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 KIAA0141Q14154 515 aaPredicted RBP9.4□□□□□ -0.9
CCM2-212ENST00000480382 POU2AF1Q16633 256 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 DEFB136Q30KP8 78 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 ZNF585BQ52M93 769 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 DMBX1Q8NFW5 382 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 OR5T1Q8NG75 326 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 OR51S1Q8NGJ8 323 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 OR5M8Q8NGP6 311 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 MS4A10Q96PG2 267 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 AIFM2Q9BRQ8 373 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 SRRQ9GZT4 340 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 GNB4Q9HAV0 340 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 HRASLSQ9HDD0 168 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 TMEM140Q9NV12 185 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 BET1LQ9NYM9 111 aa9.4□□□□□ -0.9
CCM2-212ENST00000480382 TRAV3A0A0B4J244 114 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 MPPED1O15442 326 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 SLC6A1P30531 599 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 G6PCP35575 357 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 RPL27AP46776 148 aaKnown RBP9.39□□□□□ -0.91
CCM2-212ENST00000480382 CDX1P47902 265 aaPredicted RBP9.39□□□□□ -0.91
CCM2-212ENST00000480382 TPPP2P59282 170 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 ERVK-16P61578 105 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 RPL8P62917 257 aaKnown RBP9.39□□□□□ -0.91
CCM2-212ENST00000480382 DEFA5Q01523 94 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 KLF9Q13886 244 aaPredicted RBP9.39□□□□□ -0.91
CCM2-212ENST00000480382 TOMM5Q8N4H5 51 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 ZNF491Q8N8L2 437 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 OR4A5Q8NH83 315 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 ZFAND1Q8TCF1 268 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 C4orf3Q8WVX3 66 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 RAX2Q96IS3 184 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 UBE2E2Q96LR5 201 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 OR5B12Q96R08 314 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 PRRT1Q99946 306 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 ZNF355PQ9NSJ1 428 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 MCUBQ9NWR8 336 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 SLC2A8Q9NY64 477 aa9.39□□□□□ -0.91
CCM2-212ENST00000480382 A0A1B0GW64 132 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 TEX22C9J3V5 150 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 E7EUB6 86 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 UPK2O00526 184 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 KRASP01116 189 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 IGKV1-39P01597 117 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 IGKV1D-39P04432 117 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 CTSDP07339 412 aaPredicted RBP9.38□□□□□ -0.91
CCM2-212ENST00000480382 HLA-GP17693 338 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 CD40LGP29965 261 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 MAS1LP35410 378 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 ECI1P42126 302 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 CCDC71LQ8N9Z2 235 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 TMEM68Q96MH6 324 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 FYTTD1Q96QD9 318 aaKnown RBP9.38□□□□□ -0.91
CCM2-212ENST00000480382 TP53RKQ96S44 253 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 SPIN2AQ99865 258 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 SPIN2BQ9BPZ2 258 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 SLA2Q9H6Q3 261 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 FAM212BQ9NTI7 297 aaPredicted RBP9.38□□□□□ -0.91
CCM2-212ENST00000480382 COA4Q9NYJ1 87 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 COPZ2Q9P299 210 aa9.38□□□□□ -0.91
CCM2-212ENST00000480382 C14orf166Q9Y224 244 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms