RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 COL8A2P25067 703 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 MPV17P39210 176 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 ERVS71-1P61550 626 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 REG3AQ06141 175 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 UNC119Q13432 240 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 IL18Q14116 193 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 MAD2L1BPQ15013 274 aaPredicted RBP3.56□□□□□ -1.84
UPF3A-205ENST00000479712 RSPO1Q2MKA7 263 aaPredicted RBP3.56□□□□□ -1.84
UPF3A-205ENST00000479712 TMEM155Q4W5P6 130 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 CLEC12AQ5QGZ9 265 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 C22orf42Q6IC83 251 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 DEGS2Q6QHC5 323 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 SPATA24Q86W54 205 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 ZNF283Q8N7M2 679 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 SPERTQ8NA61 448 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 HSD17B11Q8NBQ5 300 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 CCDC54Q8NEL0 328 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 OR8G5Q8NG78 346 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 OR13G1Q8NGZ3 307 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 RNF133Q8WVZ7 376 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 MYDGFQ969H8 173 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 YIPF5Q969M3 257 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 CMBLQ96DG6 245 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 ZNF799Q96GE5 643 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 PITX2Q99697 317 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 NIPSNAP1Q9BPW8 284 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 RGCCQ9H4X1 137 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 RERGLQ9H628 205 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 ABCB9Q9NP78 766 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 ZNF391Q9UJN7 358 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 ING4Q9UNL4 249 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 A0A0B4J2A0 478 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 A0A1B0GVI7 797 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 F6UB75 175 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 H3BN98 237 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 SIRPB1O00241 398 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 ZNF593O00488 134 aaPredicted RBP3.55□□□□□ -1.84
UPF3A-205ENST00000479712 GMDSO60547 372 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 SOX14O95416 240 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 CRISP2P16562 243 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 PYCR1P32322 319 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 CD200P41217 278 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 ASIPP42127 132 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 SRP9P49458 86 aaKnown RBP3.55□□□□□ -1.84
UPF3A-205ENST00000479712 CRISP1P54107 249 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 FGF8P55075 233 aaPredicted RBP3.55□□□□□ -1.84
UPF3A-205ENST00000479712 CCL8P80075 99 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 TNFAIP6P98066 277 aaPredicted RBP3.55□□□□□ -1.84
UPF3A-205ENST00000479712 EMX1Q04741 257 aaPredicted RBP3.55□□□□□ -1.84
UPF3A-205ENST00000479712 TMED1Q13445 227 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 GINS1Q14691 196 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 TMEM255AQ5JRV8 349 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 SOHLH1Q5JUK2 328 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 KDM4DQ6B0I6 523 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 ZFP1Q6P2D0 407 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 Q6ZR03 302 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 DCXRQ7Z4W1 244 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 LRRC28Q86X40 367 aaPredicted RBP3.55□□□□□ -1.84
UPF3A-205ENST00000479712 SPICQ8N5J4 248 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 CYB561A3Q8NBI2 242 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 NPBQ8NG41 125 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 OR5B3Q8NH48 314 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 OTOSQ8NHW6 89 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 ZNF502Q8TBZ5 544 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 ASB17Q8WXJ9 295 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 SLC7A6Q92536 515 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 SLAMF6Q96DU3 332 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 CENPNQ96H22 339 aaPredicted RBP3.55□□□□□ -1.84
UPF3A-205ENST00000479712 YIPF3Q9GZM5 350 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 OR51B6Q9H340 312 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 TMEM106BQ9NUM4 274 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 TMEM100Q9NV29 134 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 PTTG3PQ9NZH4 202 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 SHPKQ9UHJ6 478 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 NUFIP1Q9UHK0 495 aaKnown RBP3.55□□□□□ -1.84
UPF3A-205ENST00000479712 AP4S1Q9Y587 144 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 TMEM14AQ9Y6G1 99 aa3.55□□□□□ -1.84
UPF3A-205ENST00000479712 LRP1BQ9NZR2 4599 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 TVP23AA6NH52 213 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 CD300LBA8K4G0 201 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 F5H5K5 113 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 G3V2T6 193 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 PHYHO14832 338 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 MRPS12O15235 138 aaKnown RBP3.54□□□□□ -1.84
UPF3A-205ENST00000479712 CHST1O43916 411 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 ZNF861PO60384 105 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 FOXH1O75593 365 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 ALOX5APP20292 161 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 CFHR2P36980 270 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 CDKN1BP46527 198 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 RAB9AP51151 201 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 DAPP51397 102 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 PTGES3Q15185 160 aaKnown RBP3.54□□□□□ -1.84
UPF3A-205ENST00000479712 OR8B8Q15620 311 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 COA6Q5JTJ3 125 aaKnown RBP3.54□□□□□ -1.84
UPF3A-205ENST00000479712 AADACL4Q5VUY2 407 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 NXNL2Q5VZ03 156 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 C12orf73Q69YU5 71 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 OR2T2Q6IF00 324 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms