RNA–Protein interactions for RNA: ENST00000479309.6

SPC25-204, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 510 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-204ENST00000479309 RPS19BP1Q86WX3 136 aaKnown RBP0.62□□□□□ -2.31
SPC25-204ENST00000479309 TMEM86AQ8N2M4 240 aa0.62□□□□□ -2.31
SPC25-204ENST00000479309 MBD3L1Q8WWY6 194 aa0.62□□□□□ -2.31
SPC25-204ENST00000479309 CMTM5Q96DZ9 223 aa0.62□□□□□ -2.31
SPC25-204ENST00000479309 GNPNAT1Q96EK6 184 aaPredicted RBP0.62□□□□□ -2.31
SPC25-204ENST00000479309 IMMP2LQ96T52 175 aa0.62□□□□□ -2.31
SPC25-204ENST00000479309 UPF3BQ9BZI7 483 aaKnown RBP0.62□□□□□ -2.31
SPC25-204ENST00000479309 HDHD2Q9H0R4 259 aa0.62□□□□□ -2.31
SPC25-204ENST00000479309 ANAPC10Q9UM13 185 aa0.62□□□□□ -2.31
SPC25-204ENST00000479309 PRELID1Q9Y255 219 aa0.62□□□□□ -2.31
SPC25-204ENST00000479309 SOX21Q9Y651 276 aaPredicted RBP0.62□□□□□ -2.31
SPC25-204ENST00000479309 SCN9AQ15858 1988 aa0.62□□□□□ -2.31
SPC25-204ENST00000479309 SMARCA4P51532 1647 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 NAV1Q8NEY1 1877 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 ABCC11Q96J66 1382 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 IGKV2-40A0A087WW87 121 aaPredicted RBP0.61□□□□□ -2.31
SPC25-204ENST00000479309 A0A0A6YYH2 397 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 IGKV3D-7A0A0C4DH55 119 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 IGKV3OR2-268A0A0C4DH90 116 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 IGHV1-69-2A0A0G2JMI3 117 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 C1orf232A0A0U1RR37 186 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 A6NJ64 397 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 IGKV2D-40P01614 121 aaPredicted RBP0.61□□□□□ -2.31
SPC25-204ENST00000479309 HLA-DRAP01903 254 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 CRPP02741 224 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 OCM2P0CE71 109 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 C8orf88P0DMB2 117 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 LYNX1P0DP58 116 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 MYL12AP19105 171 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 MSNP26038 577 aaKnown RBP0.61□□□□□ -2.31
SPC25-204ENST00000479309 RPL28P46779 137 aaKnown RBP0.61□□□□□ -2.31
SPC25-204ENST00000479309 PPP1R1AQ13522 171 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 ELOBQ15370 118 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 SLC36A2Q495M3 483 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 ACSM3Q53FZ2 586 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 SAPCD1Q5SSQ6 148 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 C9orf64Q5T6V5 341 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 DYNAPQ8N1N2 210 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 UMODL1-AS1Q8N2C9 162 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 SLC22A24Q8N4F4 322 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 PACRGLQ8N7B6 248 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 TMEM161BQ8NDZ6 487 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 OR2T27Q8NH04 317 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 C10orf105Q8TEF2 133 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 RETNLBQ9BQ08 111 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 CHST6Q9GZX3 395 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 OR51I2Q9H344 312 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 GPR84Q9NQS5 396 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 AK3Q9UIJ7 227 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 DKKL1Q9UK85 242 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 C15orf41Q9Y2V0 281 aa0.61□□□□□ -2.31
SPC25-204ENST00000479309 RBM7Q9Y580 266 aaKnown RBP0.61□□□□□ -2.31
SPC25-204ENST00000479309 SCAF11Q99590 1463 aaKnown RBP0.61□□□□□ -2.31
SPC25-204ENST00000479309 PIK3R4Q99570 1358 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 IGKV1D-43A0A0B4J1Z2 117 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 A0A0D9SEW6 157 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 TMEM269A0A1B0GVZ9 245 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 TRAPPC13A5PLN9 417 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 MEIS3P1A6NDR6 274 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 OR4C45A6NMZ5 311 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 H3BT86 120 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 PFDN6O15212 129 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 PLA2G10O15496 165 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 COCHO43405 550 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 MRPS14O60783 128 aaKnown RBP0.6□□□□□ -2.31
SPC25-204ENST00000479309 PPBPP02775 128 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 TYMSP04818 313 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 MSMBP08118 114 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 RPSAP08865 295 aaKnown RBP0.6□□□□□ -2.31
SPC25-204ENST00000479309 UCHL3P15374 230 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 CCR7P32248 378 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 G6PCP35575 357 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 EVX1P49640 407 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 RAB13P51153 203 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 AQP4P55087 323 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 MAP3K7CLP57077 242 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 RAB14P61106 215 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 RPL30P62888 115 aaKnown RBP0.6□□□□□ -2.31
SPC25-204ENST00000479309 OGFRL1Q5TC84 451 aaPredicted RBP0.6□□□□□ -2.31
SPC25-204ENST00000479309 UNQ6190/PRO20217Q6UXQ8 127 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 C7orf65Q6ZTY9 151 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 HIST2H3AQ71DI3 136 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 FP248Q71RG6 208 aaPredicted RBP0.6□□□□□ -2.31
SPC25-204ENST00000479309 SSX8Q7RTT4 187 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 SLC36A1Q7Z2H8 476 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 RPP25LQ8N5L8 163 aaKnown RBP0.6□□□□□ -2.31
SPC25-204ENST00000479309 TBC1D19Q8N5T2 526 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 Q96M85 177 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 DRC3Q9H069 523 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 MAP1LC3AQ9H492 121 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 CXorf21Q9HAI6 301 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 MED9Q9NWA0 146 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 RSL24D1Q9UHA3 163 aaKnown RBP0.6□□□□□ -2.31
SPC25-204ENST00000479309 COQ4Q9Y3A0 265 aa0.6□□□□□ -2.31
SPC25-204ENST00000479309 CPAMD8Q8IZJ3 1885 aa0.59□□□□□ -2.31
SPC25-204ENST00000479309 IGKV3-7A0A075B6H7 116 aa0.59□□□□□ -2.31
SPC25-204ENST00000479309 OR51F1A6NGY5 319 aa0.59□□□□□ -2.31
SPC25-204ENST00000479309 LST1O00453 97 aa0.59□□□□□ -2.31
SPC25-204ENST00000479309 ORC5O43913 435 aa0.59□□□□□ -2.31
SPC25-204ENST00000479309 NSA2O95478 260 aaKnown RBP0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms