RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 TINAGL1Q9GZM7 467 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-217ENST00000479161 ZNF430Q9H8G1 570 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-217ENST00000479161 ANKRD20A5PA0PJZ0 165 aa12.06□□□□□ -0.48
C9orf3-217ENST00000479161 M0QYG6 137 aa12.06□□□□□ -0.48
C9orf3-217ENST00000479161 TNFSF12O43508 249 aa12.06□□□□□ -0.48
C9orf3-217ENST00000479161 RAMP3O60896 148 aa12.06□□□□□ -0.48
C9orf3-217ENST00000479161 ACTL6BO94805 426 aa12.06□□□□□ -0.48
C9orf3-217ENST00000479161 DUS4LO95620 317 aaKnown RBP12.06□□□□□ -0.48
C9orf3-217ENST00000479161 AKAIN1P0CW23 69 aa12.06□□□□□ -0.48
C9orf3-217ENST00000479161 SURF2Q15527 256 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-217ENST00000479161 ZFAND1Q8TCF1 268 aa12.06□□□□□ -0.48
C9orf3-217ENST00000479161 P2RX4Q99571 388 aa12.06□□□□□ -0.48
C9orf3-217ENST00000479161 SLC2A8Q9NY64 477 aa12.06□□□□□ -0.48
C9orf3-217ENST00000479161 VSIG4Q9Y279 399 aa12.06□□□□□ -0.48
C9orf3-217ENST00000479161 MEGF8Q7Z7M0 2845 aa12.06□□□□□ -0.48
C9orf3-217ENST00000479161 A0A1W2PN81 502 aa12.05□□□□□ -0.48
C9orf3-217ENST00000479161 A0A1W2PRX2 142 aa12.05□□□□□ -0.48
C9orf3-217ENST00000479161 B3GALNT1O75752 331 aa12.05□□□□□ -0.48
C9orf3-217ENST00000479161 ZNF735P0CB33 412 aa12.05□□□□□ -0.48
C9orf3-217ENST00000479161 CHRNA7P36544 502 aa12.05□□□□□ -0.48
C9orf3-217ENST00000479161 ECSCRQ19T08 205 aa12.05□□□□□ -0.48
C9orf3-217ENST00000479161 OR2B11Q5JQS5 317 aa12.05□□□□□ -0.48
C9orf3-217ENST00000479161 KHDC1LQ5JSQ8 128 aa12.05□□□□□ -0.48
C9orf3-217ENST00000479161 HIST2H2BDQ6DRA6 164 aa12.05□□□□□ -0.48
C9orf3-217ENST00000479161 KLHL30-AS1Q8NEE0 82 aa12.05□□□□□ -0.48
C9orf3-217ENST00000479161 OR51H1Q8NH63 302 aa12.05□□□□□ -0.48
C9orf3-217ENST00000479161 ABHD5Q8WTS1 349 aa12.05□□□□□ -0.48
C9orf3-217ENST00000479161 SRSF12Q8WXF0 261 aaKnown RBP12.05□□□□□ -0.48
C9orf3-217ENST00000479161 GPHA2Q96T91 129 aa12.05□□□□□ -0.48
C9orf3-217ENST00000479161 SRSF8Q9BRL6 282 aaKnown RBP12.05□□□□□ -0.48
C9orf3-217ENST00000479161 KLK15Q9H2R5 256 aa12.05□□□□□ -0.48
C9orf3-217ENST00000479161 SLC2A9Q9NRM0 540 aa12.05□□□□□ -0.48
C9orf3-217ENST00000479161 DISC1C4P0D8 188 aa12.04□□□□□ -0.48
C9orf3-217ENST00000479161 I3L521 148 aa12.04□□□□□ -0.48
C9orf3-217ENST00000479161 PF4P02776 101 aa12.04□□□□□ -0.48
C9orf3-217ENST00000479161 RLN1P04808 185 aa12.04□□□□□ -0.48
C9orf3-217ENST00000479161 RPA2P15927 270 aa12.04□□□□□ -0.48
C9orf3-217ENST00000479161 RPL8P62917 257 aaKnown RBP12.04□□□□□ -0.48
C9orf3-217ENST00000479161 FHL3Q13643 280 aa12.04□□□□□ -0.48
C9orf3-217ENST00000479161 KLK9Q2XQG4 91 aa12.04□□□□□ -0.48
C9orf3-217ENST00000479161 ZNF585BQ52M93 769 aa12.04□□□□□ -0.48
C9orf3-217ENST00000479161 OR4A47Q6IF82 309 aa12.04□□□□□ -0.48
C9orf3-217ENST00000479161 ETV3LQ6ZN32 361 aa12.04□□□□□ -0.48
C9orf3-217ENST00000479161 IDO2Q6ZQW0 420 aa12.04□□□□□ -0.48
C9orf3-217ENST00000479161 LINC00299Q6ZSB3 139 aa12.04□□□□□ -0.48
C9orf3-217ENST00000479161 SLC25A42Q86VD7 318 aa12.04□□□□□ -0.48
C9orf3-217ENST00000479161 LINC00482Q8N8I6 264 aa12.04□□□□□ -0.48
C9orf3-217ENST00000479161 GRPEL2Q8TAA5 225 aa12.04□□□□□ -0.48
C9orf3-217ENST00000479161 PRRT1Q99946 306 aa12.04□□□□□ -0.48
C9orf3-217ENST00000479161 FAM103A1Q9BTL3 118 aaKnown RBP12.04□□□□□ -0.48
C9orf3-217ENST00000479161 KLK9Q9UKQ9 250 aa12.04□□□□□ -0.48
C9orf3-217ENST00000479161 V9GYH0 126 aa12.04□□□□□ -0.48
C9orf3-217ENST00000479161 MSGN1A6NI15 193 aa12.03□□□□□ -0.48
C9orf3-217ENST00000479161 NUDT19A8MXV4 375 aa12.03□□□□□ -0.48
C9orf3-217ENST00000479161 CCL24O00175 119 aa12.03□□□□□ -0.48
C9orf3-217ENST00000479161 MPPED1O15442 326 aa12.03□□□□□ -0.48
C9orf3-217ENST00000479161 AP3S2P59780 193 aa12.03□□□□□ -0.48
C9orf3-217ENST00000479161 TNXAQ16473 311 aa12.03□□□□□ -0.48
C9orf3-217ENST00000479161 RNASE12Q5GAN4 147 aaKnown RBP12.03□□□□□ -0.48
C9orf3-217ENST00000479161 SPANXN2Q5MJ10 180 aa12.03□□□□□ -0.48
C9orf3-217ENST00000479161 KPRPQ5T749 579 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-217ENST00000479161 ASPHD1Q5U4P2 390 aa12.03□□□□□ -0.48
C9orf3-217ENST00000479161 THOC7Q6I9Y2 204 aaKnown RBP12.03□□□□□ -0.48
C9orf3-217ENST00000479161 C8orf86Q6ZUL3 223 aa12.03□□□□□ -0.48
C9orf3-217ENST00000479161 VKORC1L1Q8N0U8 176 aa12.03□□□□□ -0.48
C9orf3-217ENST00000479161 TTC9CQ8N5M4 171 aa12.03□□□□□ -0.48
C9orf3-217ENST00000479161 OR4D10Q8NGI6 311 aa12.03□□□□□ -0.48
C9orf3-217ENST00000479161 RCC1LQ96I51 464 aaKnown RBP12.03□□□□□ -0.48
C9orf3-217ENST00000479161 THAP7Q9BT49 309 aaPredicted RBP12.03□□□□□ -0.48
C9orf3-217ENST00000479161 A0A0G2JLM5 398 aa12.02□□□□□ -0.49
C9orf3-217ENST00000479161 MARCH11A6NNE9 402 aa12.02□□□□□ -0.49
C9orf3-217ENST00000479161 UPK2O00526 184 aa12.02□□□□□ -0.49
C9orf3-217ENST00000479161 CTSDP07339 412 aaPredicted RBP12.02□□□□□ -0.49
C9orf3-217ENST00000479161 OR9G9P0C7N8 305 aa12.02□□□□□ -0.49
C9orf3-217ENST00000479161 ERVK-16P61578 105 aa12.02□□□□□ -0.49
C9orf3-217ENST00000479161 GNB1P62873 340 aa12.02□□□□□ -0.49
C9orf3-217ENST00000479161 ZNF79Q15937 498 aa12.02□□□□□ -0.49
C9orf3-217ENST00000479161 SAMD5Q5TGI4 173 aa12.02□□□□□ -0.49
C9orf3-217ENST00000479161 TBC1D26Q86UD7 250 aa12.02□□□□□ -0.49
C9orf3-217ENST00000479161 MRPL41Q8IXM3 137 aaKnown RBP12.02□□□□□ -0.49
C9orf3-217ENST00000479161 Q8N402 240 aa12.02□□□□□ -0.49
C9orf3-217ENST00000479161 CCDC71LQ8N9Z2 235 aa12.02□□□□□ -0.49
C9orf3-217ENST00000479161 ADAD2Q8NCV1 583 aaKnown RBP12.02□□□□□ -0.49
C9orf3-217ENST00000479161 OR4C16Q8NGL9 310 aa12.02□□□□□ -0.49
C9orf3-217ENST00000479161 OR6Q1Q8NGQ2 317 aa12.02□□□□□ -0.49
C9orf3-217ENST00000479161 RAX2Q96IS3 184 aa12.02□□□□□ -0.49
C9orf3-217ENST00000479161 USMG5Q96IX5 58 aa12.02□□□□□ -0.49
C9orf3-217ENST00000479161 SCGB3A2Q96PL1 93 aa12.02□□□□□ -0.49
C9orf3-217ENST00000479161 MCRIP2Q9BUT9 160 aaKnown RBP12.02□□□□□ -0.49
C9orf3-217ENST00000479161 GPR61Q9BZJ8 451 aa12.02□□□□□ -0.49
C9orf3-217ENST00000479161 NPIPB5A8MRT5 1133 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 H0Y980 276 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 S1PR2O95136 353 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 CRYGCP07315 174 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 HLA-GP17693 338 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 CD33P20138 364 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 FAUP35544 74 aaKnown RBP12.01□□□□□ -0.49
C9orf3-217ENST00000479161 LPAR6P43657 344 aa12.01□□□□□ -0.49
C9orf3-217ENST00000479161 RPL27AP46776 148 aaKnown RBP12.01□□□□□ -0.49
C9orf3-217ENST00000479161 PIGPP57054 158 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms