RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 OR4A5Q8NH83 315 aa17.73■□□□□ 0.43
SDF4-206ENST00000478938 CA1P00915 261 aaPredicted RBP17.73■□□□□ 0.43
SDF4-206ENST00000478938 CGAP01215 116 aa17.73■□□□□ 0.43
SDF4-206ENST00000478938 GDF1P27539 372 aa17.73■□□□□ 0.43
SDF4-206ENST00000478938 G6PCP35575 357 aa17.73■□□□□ 0.43
SDF4-206ENST00000478938 RPL8P62917 257 aaKnown RBP17.73■□□□□ 0.43
SDF4-206ENST00000478938 C1orf61Q13536 156 aa17.73■□□□□ 0.43
SDF4-206ENST00000478938 TSTD1Q8NFU3 115 aa17.73■□□□□ 0.43
SDF4-206ENST00000478938 GUCD1Q96NT3 240 aa17.73■□□□□ 0.43
SDF4-206ENST00000478938 SCRT2Q9NQ03 307 aa17.73■□□□□ 0.43
SDF4-206ENST00000478938 MYO15AQ9UKN7 3530 aa17.73■□□□□ 0.43
SDF4-206ENST00000478938 PATE4P0C8F1 98 aa17.72■□□□□ 0.43
SDF4-206ENST00000478938 STAG3L2P0CL84 134 aa17.72■□□□□ 0.43
SDF4-206ENST00000478938 STAG3L3P0CL85 134 aa17.72■□□□□ 0.43
SDF4-206ENST00000478938 HIST1H1AQ02539 215 aaPredicted RBP17.72■□□□□ 0.43
SDF4-206ENST00000478938 STPG3Q8N7X2 389 aa17.72■□□□□ 0.43
SDF4-206ENST00000478938 LIN7CQ9NUP9 197 aaKnown RBP17.72■□□□□ 0.43
SDF4-206ENST00000478938 ZNF835Q9Y2P0 537 aa17.72■□□□□ 0.43
SDF4-206ENST00000478938 CXorf1O96002 111 aa17.72■□□□□ 0.43
SDF4-206ENST00000478938 CEACAM3P40198 252 aa17.72■□□□□ 0.43
SDF4-206ENST00000478938 COX19Q49B96 90 aa17.72■□□□□ 0.43
SDF4-206ENST00000478938 RNFT1Q5M7Z0 435 aa17.72■□□□□ 0.43
SDF4-206ENST00000478938 PQLC2Q6ZP29 291 aa17.72■□□□□ 0.43
SDF4-206ENST00000478938 MCRIP2Q9BUT9 160 aaKnown RBP17.72■□□□□ 0.43
SDF4-206ENST00000478938 PRDM6Q9NQX0 595 aa17.72■□□□□ 0.43
SDF4-206ENST00000478938 TRGV10A0A0A0MS01 117 aa17.71■□□□□ 0.43
SDF4-206ENST00000478938 SNAI2O43623 268 aa17.71■□□□□ 0.43
SDF4-206ENST00000478938 GPR183P32249 361 aa17.71■□□□□ 0.43
SDF4-206ENST00000478938 GNG4P50150 75 aa17.71■□□□□ 0.43
SDF4-206ENST00000478938 TFF2Q03403 129 aa17.71■□□□□ 0.43
SDF4-206ENST00000478938 OR10W1Q8NGF6 305 aa17.71■□□□□ 0.43
SDF4-206ENST00000478938 K7EP34 96 aa17.71■□□□□ 0.43
SDF4-206ENST00000478938 RAB9AP51151 201 aa17.71■□□□□ 0.43
SDF4-206ENST00000478938 ZXDAP98168 799 aa17.71■□□□□ 0.43
SDF4-206ENST00000478938 SHISA6Q6ZSJ9 500 aa17.71■□□□□ 0.43
SDF4-206ENST00000478938 SERTAD4Q9NUC0 356 aa17.71■□□□□ 0.43
SDF4-206ENST00000478938 KLRF1Q9NZS2 232 aa17.71■□□□□ 0.43
SDF4-206ENST00000478938 IGHV3-15A0A0B4J1V0 119 aa17.7■□□□□ 0.42
SDF4-206ENST00000478938 H3BUT2 72 aa17.7■□□□□ 0.42
SDF4-206ENST00000478938 PLP1P60201 277 aa17.7■□□□□ 0.42
SDF4-206ENST00000478938 FAM120AOSQ5T036 256 aa17.7■□□□□ 0.42
SDF4-206ENST00000478938 PCDH15Q96QU1 1955 aa17.7■□□□□ 0.42
SDF4-206ENST00000478938 SPINK2P20155 84 aa17.7■□□□□ 0.42
SDF4-206ENST00000478938 WDR82Q6UXN9 313 aa17.7■□□□□ 0.42
SDF4-206ENST00000478938 AP1S3Q96PC3 154 aa17.7■□□□□ 0.42
SDF4-206ENST00000478938 WDR83OSQ9Y284 106 aa17.7■□□□□ 0.42
SDF4-206ENST00000478938 LY96Q9Y6Y9 160 aa17.7■□□□□ 0.42
SDF4-206ENST00000478938 TRAV26-1A0A087WT03 109 aa17.69■□□□□ 0.42
SDF4-206ENST00000478938 hCG_38984A0A1B0GV85 526 aa17.69■□□□□ 0.42
SDF4-206ENST00000478938 DHHO43323 396 aa17.69■□□□□ 0.42
SDF4-206ENST00000478938 SCGB1A1P11684 91 aa17.69■□□□□ 0.42
SDF4-206ENST00000478938 C10orf128Q5T292 105 aa17.69■□□□□ 0.42
SDF4-206ENST00000478938 SPATA31B1PQ5VZV4 182 aa17.69■□□□□ 0.42
SDF4-206ENST00000478938 C11orf52Q96A22 123 aa17.69■□□□□ 0.42
SDF4-206ENST00000478938 PLSCR4Q9NRQ2 329 aa17.69■□□□□ 0.42
SDF4-206ENST00000478938 GCHFRP30047 84 aa17.69■□□□□ 0.42
SDF4-206ENST00000478938 SUMO3P55854 103 aaPredicted RBP17.69■□□□□ 0.42
SDF4-206ENST00000478938 GDF5OSQ5U4N7 250 aa17.69■□□□□ 0.42
SDF4-206ENST00000478938 MIC13Q5XKP0 118 aa17.69■□□□□ 0.42
SDF4-206ENST00000478938 ZNF331Q9NQX6 463 aaPredicted RBP17.69■□□□□ 0.42
SDF4-206ENST00000478938 MTCH1Q9NZJ7 389 aa17.69■□□□□ 0.42
SDF4-206ENST00000478938 LRRC30A6NM36 301 aa17.68■□□□□ 0.42
SDF4-206ENST00000478938 SYS1-DBNDD2H3BUS1 97 aa17.68■□□□□ 0.42
SDF4-206ENST00000478938 SYNGR3O43761 229 aa17.68■□□□□ 0.42
SDF4-206ENST00000478938 OR10J4P0C629 311 aa17.68■□□□□ 0.42
SDF4-206ENST00000478938 ZNF816Q0VGE8 651 aaPredicted RBP17.68■□□□□ 0.42
SDF4-206ENST00000478938 DEFB118Q96PH6 123 aa17.68■□□□□ 0.42
SDF4-206ENST00000478938 NPFFR1Q9GZQ6 430 aa17.68■□□□□ 0.42
SDF4-206ENST00000478938 EXPH5Q8NEV8 1989 aa17.68■□□□□ 0.42
SDF4-206ENST00000478938 EN2P19622 333 aaPredicted RBP17.68■□□□□ 0.42
SDF4-206ENST00000478938 CD1BP29016 333 aa17.68■□□□□ 0.42
SDF4-206ENST00000478938 STXBP6Q8NFX7 210 aa17.68■□□□□ 0.42
SDF4-206ENST00000478938 SIGMAR1Q99720 223 aa17.68■□□□□ 0.42
SDF4-206ENST00000478938 SSBP4Q9BWG4 385 aaPredicted RBP17.68■□□□□ 0.42
SDF4-206ENST00000478938 KIR2DS5A0A0G2JLQ3 304 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 A0A0G2JNG1 304 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 FAM90A10PA6NDY2 464 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 FAM90A18PA6NE21 464 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 FAM90A16PA6NEW6 464 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 FAM90A20PA6NIJ5 464 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 FAM90A8PA6NJQ4 464 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 FAM90A7PA6NKC0 464 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 FAM90A22PA8MWA6 464 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 FAM90A12PA8MX19 464 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 FAM90A5PA8MXJ8 464 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 FAM90A23PA8MXZ1 464 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 KIR2DS3K7RE56 304 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 FOXH1O75593 365 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 APOA2P02652 100 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 FAM90A15PP0C7V4 464 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 FAM90A13PP0C7W8 464 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 FAM90A14PP0C7W9 464 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 FAM90A24PP0C7X0 464 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 HTR1DP28221 377 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 FGF12P61328 243 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 KIR2DS5Q14953 304 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 SLC35E4Q6ICL7 350 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 WDR74Q6RFH5 385 aaPredicted RBP17.67■□□□□ 0.42
SDF4-206ENST00000478938 C2orf91Q6ZV80 131 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 URB1-AS1Q96HZ7 61 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms