RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 LINC00588Q9Y4M8 146 aa8.56□□□□□ -1.04
HDAC8-217ENST00000478743 IGHV3-21A0A0B4J1V1 117 aa8.55□□□□□ -1.04
HDAC8-217ENST00000478743 DPPA5A6NC42 116 aa8.55□□□□□ -1.04
HDAC8-217ENST00000478743 ACTL6BO94805 426 aa8.55□□□□□ -1.04
HDAC8-217ENST00000478743 ZNF735P0CB33 412 aa8.55□□□□□ -1.04
HDAC8-217ENST00000478743 GSTT2P0CG29 244 aa8.55□□□□□ -1.04
HDAC8-217ENST00000478743 GSTT2BP0CG30 244 aa8.55□□□□□ -1.04
HDAC8-217ENST00000478743 ZBTB25P24278 435 aa8.55□□□□□ -1.04
HDAC8-217ENST00000478743 MAS1LP35410 378 aa8.55□□□□□ -1.04
HDAC8-217ENST00000478743 RPL27AP46776 148 aaKnown RBP8.55□□□□□ -1.04
HDAC8-217ENST00000478743 PPP3R1P63098 170 aa8.55□□□□□ -1.04
HDAC8-217ENST00000478743 RTL8BQ17RB0 113 aa8.55□□□□□ -1.04
HDAC8-217ENST00000478743 AWAT2Q6E213 333 aa8.55□□□□□ -1.04
HDAC8-217ENST00000478743 LHFPL3Q86UP9 236 aa8.55□□□□□ -1.04
HDAC8-217ENST00000478743 MMD2Q8IY49 270 aa8.55□□□□□ -1.04
HDAC8-217ENST00000478743 LILRB2Q8N423 598 aa8.55□□□□□ -1.04
HDAC8-217ENST00000478743 CANT1Q8WVQ1 401 aa8.55□□□□□ -1.04
HDAC8-217ENST00000478743 THTPAQ9BU02 230 aa8.55□□□□□ -1.04
HDAC8-217ENST00000478743 KCNK15Q9H427 330 aa8.55□□□□□ -1.04
HDAC8-217ENST00000478743 CHMP1AQ9HD42 196 aaPredicted RBP8.55□□□□□ -1.04
HDAC8-217ENST00000478743 IGHV7-4-1A0A0J9YVY3 117 aa8.54□□□□□ -1.04
HDAC8-217ENST00000478743 KRTAP9-6A0A140TA67 174 aa8.54□□□□□ -1.04
HDAC8-217ENST00000478743 HMGB1P1B2RPK0 211 aaPredicted RBP8.54□□□□□ -1.04
HDAC8-217ENST00000478743 NDUFA4O00483 81 aa8.54□□□□□ -1.04
HDAC8-217ENST00000478743 CMC4P56277 68 aaPredicted RBP8.54□□□□□ -1.04
HDAC8-217ENST00000478743 SNRPGP62308 76 aaKnown RBP8.54□□□□□ -1.04
HDAC8-217ENST00000478743 GPR176Q14439 515 aa8.54□□□□□ -1.04
HDAC8-217ENST00000478743 IRF3Q14653 427 aa8.54□□□□□ -1.04
HDAC8-217ENST00000478743 LIPKQ5VXJ0 399 aa8.54□□□□□ -1.04
HDAC8-217ENST00000478743 JAGN1Q8N5M9 183 aa8.54□□□□□ -1.04
HDAC8-217ENST00000478743 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.54□□□□□ -1.04
HDAC8-217ENST00000478743 OR6M1Q8NGM8 313 aa8.54□□□□□ -1.04
HDAC8-217ENST00000478743 CXorf58Q96LI9 332 aa8.54□□□□□ -1.04
HDAC8-217ENST00000478743 K7EMT4 169 aa8.53□□□□□ -1.04
HDAC8-217ENST00000478743 RAB27BO00194 218 aa8.53□□□□□ -1.04
HDAC8-217ENST00000478743 SPART-AS1P0CW21 52 aa8.53□□□□□ -1.04
HDAC8-217ENST00000478743 SPP1P10451 314 aa8.53□□□□□ -1.04
HDAC8-217ENST00000478743 CBX3Q13185 183 aa8.53□□□□□ -1.04
HDAC8-217ENST00000478743 OR2G6Q5TZ20 316 aa8.53□□□□□ -1.04
HDAC8-217ENST00000478743 FAM222AQ5U5X8 452 aa8.53□□□□□ -1.04
HDAC8-217ENST00000478743 OR10K2Q6IF99 312 aa8.53□□□□□ -1.04
HDAC8-217ENST00000478743 Q6ZRN7 208 aaPredicted RBP8.53□□□□□ -1.04
HDAC8-217ENST00000478743 MFSD4AQ8N468 514 aa8.53□□□□□ -1.04
HDAC8-217ENST00000478743 TMEM116Q8NCL8 245 aa8.53□□□□□ -1.04
HDAC8-217ENST00000478743 MS4A6AQ9H2W1 248 aa8.53□□□□□ -1.04
HDAC8-217ENST00000478743 DKK2Q9UBU2 259 aa8.53□□□□□ -1.04
HDAC8-217ENST00000478743 NUPL2O15504 423 aaKnown RBP8.52□□□□□ -1.05
HDAC8-217ENST00000478743 APOHP02749 345 aaPredicted RBP8.52□□□□□ -1.05
HDAC8-217ENST00000478743 HIST1H1BP16401 226 aaKnown RBP8.52□□□□□ -1.05
HDAC8-217ENST00000478743 DUTP33316 252 aaKnown RBP8.52□□□□□ -1.05
HDAC8-217ENST00000478743 TMEM41BQ5BJD5 291 aa8.52□□□□□ -1.05
HDAC8-217ENST00000478743 OR2B11Q5JQS5 317 aa8.52□□□□□ -1.05
HDAC8-217ENST00000478743 TCF24Q7RTU0 167 aa8.52□□□□□ -1.05
HDAC8-217ENST00000478743 DNAJC9Q8WXX5 260 aa8.52□□□□□ -1.05
HDAC8-217ENST00000478743 A0A0A6YYD4 124 aa8.51□□□□□ -1.05
HDAC8-217ENST00000478743 FAM107AO95990 144 aa8.51□□□□□ -1.05
HDAC8-217ENST00000478743 DNAH10OSP0CZ25 163 aa8.51□□□□□ -1.05
HDAC8-217ENST00000478743 DEFA4P12838 97 aa8.51□□□□□ -1.05
HDAC8-217ENST00000478743 PTBP1P26599 531 aaKnown RBP eCLIP8.51□□□□□ -1.05
HDAC8-217ENST00000478743 HTR2CP28335 458 aa8.51□□□□□ -1.05
HDAC8-217ENST00000478743 PSMD7P51665 324 aa8.51□□□□□ -1.05
HDAC8-217ENST00000478743 TMED1Q13445 227 aa8.51□□□□□ -1.05
HDAC8-217ENST00000478743 MOB1BQ7L9L4 216 aa8.51□□□□□ -1.05
HDAC8-217ENST00000478743 ACBD7Q8N6N7 88 aa8.51□□□□□ -1.05
HDAC8-217ENST00000478743 C15orf53Q8NAA6 179 aa8.51□□□□□ -1.05
HDAC8-217ENST00000478743 OSR1Q8TAX0 266 aaPredicted RBP8.51□□□□□ -1.05
HDAC8-217ENST00000478743 GPR148Q8TDV2 347 aa8.51□□□□□ -1.05
HDAC8-217ENST00000478743 NIPSNAP3BQ9BS92 247 aa8.51□□□□□ -1.05
HDAC8-217ENST00000478743 XCL2Q9UBD3 114 aa8.51□□□□□ -1.05
HDAC8-217ENST00000478743 AK3Q9UIJ7 227 aa8.51□□□□□ -1.05
HDAC8-217ENST00000478743 IGHV3-66A0A0C4DH42 116 aa8.5□□□□□ -1.05
HDAC8-217ENST00000478743 C15orf62A8K5M9 175 aa8.5□□□□□ -1.05
HDAC8-217ENST00000478743 KBTBD11O94819 623 aa8.5□□□□□ -1.05
HDAC8-217ENST00000478743 CD2P06729 351 aa8.5□□□□□ -1.05
HDAC8-217ENST00000478743 RRASP10301 218 aa8.5□□□□□ -1.05
HDAC8-217ENST00000478743 PLA2G7Q13093 441 aa8.5□□□□□ -1.05
HDAC8-217ENST00000478743 ACTL10Q5JWF8 245 aa8.5□□□□□ -1.05
HDAC8-217ENST00000478743 UBE2UQ5VVX9 321 aa8.5□□□□□ -1.05
HDAC8-217ENST00000478743 OR8J1Q8NGP2 316 aa8.5□□□□□ -1.05
HDAC8-217ENST00000478743 ST8SIA2Q92186 375 aa8.5□□□□□ -1.05
HDAC8-217ENST00000478743 CCDC124Q96CT7 223 aaKnown RBP8.5□□□□□ -1.05
HDAC8-217ENST00000478743 LGALS12Q96DT0 336 aa8.5□□□□□ -1.05
HDAC8-217ENST00000478743 Q9N2K0 584 aa8.5□□□□□ -1.05
HDAC8-217ENST00000478743 PGPEP1Q9NXJ5 209 aa8.5□□□□□ -1.05
HDAC8-217ENST00000478743 TRBV6-6A0A0A6YYG2 114 aa8.49□□□□□ -1.05
HDAC8-217ENST00000478743 A0A1W2PPK0 400 aa8.49□□□□□ -1.05
HDAC8-217ENST00000478743 IGLC7A0M8Q6 106 aa8.49□□□□□ -1.05
HDAC8-217ENST00000478743 CREBL2O60519 120 aaPredicted RBP8.49□□□□□ -1.05
HDAC8-217ENST00000478743 DFFBO76075 338 aa8.49□□□□□ -1.05
HDAC8-217ENST00000478743 ZNF688P0C7X2 276 aa8.49□□□□□ -1.05
HDAC8-217ENST00000478743 MNAT1P51948 309 aa8.49□□□□□ -1.05
HDAC8-217ENST00000478743 PUSL1Q8N0Z8 303 aaKnown RBP8.49□□□□□ -1.05
HDAC8-217ENST00000478743 SYS1Q8N2H4 156 aa8.49□□□□□ -1.05
HDAC8-217ENST00000478743 BSCL2Q96G97 398 aaPredicted RBP8.49□□□□□ -1.05
HDAC8-217ENST00000478743 OR51E2Q9H255 320 aa8.49□□□□□ -1.05
HDAC8-217ENST00000478743 PTTG2Q9NZH5 202 aa8.49□□□□□ -1.05
HDAC8-217ENST00000478743 EXOGQ9Y2C4 368 aaKnown RBP8.49□□□□□ -1.05
HDAC8-217ENST00000478743 TNXBP22105 4242 aa8.49□□□□□ -1.05
HDAC8-217ENST00000478743 RPS10-NUDT3A0A1W2PQS6 291 aa8.48□□□□□ -1.05
HDAC8-217ENST00000478743 B2RBV5 119 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms