RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ADARB2-AS1A8MUL3 147 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 ACTL6BO94805 426 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 KBTBD11O94819 623 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 OR2A4O95047 310 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 HRASP01112 189 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 CRYGBP07316 175 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 PF4V1P10720 104 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 SSBP2P81877 361 aaPredicted RBP5.4□□□□□ -1.54
BRCA1-215ENST00000478531 CFHR3Q02985 330 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 PRSS8Q16651 343 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 TMEM65Q6PI78 240 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 ZNF562Q6V9R5 426 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 C18orf65Q6ZTR6 163 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 LHFPL1Q86WI0 220 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 TEX45Q8NA69 505 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 KLHL30-AS1Q8NEE0 82 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 DMBX1Q8NFW5 382 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 OR51S1Q8NGJ8 323 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 OR13C8Q8NGS7 320 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 MARCH1Q8TCQ1 289 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 TRIM63Q969Q1 353 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 OR2A7Q96R45 310 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 HRASLSQ9HDD0 168 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 MPPED1O15442 326 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 RBFOX2O43251 390 aaKnown RBP eCLIP5.4□□□□□ -1.55
BRCA1-215ENST00000478531 CREBL2O60519 120 aaPredicted RBP5.4□□□□□ -1.55
BRCA1-215ENST00000478531 HPRT1P00492 218 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 IGHG4P01861 327 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 PF4P02776 101 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 EGR2P11161 476 aaPredicted RBP5.4□□□□□ -1.55
BRCA1-215ENST00000478531 NQO2P16083 231 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 F2RP25116 425 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 UCP3P55916 312 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 PIGPP57054 158 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 TAS2R31P59538 309 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 ERVK-16P61578 105 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 RPL23AP62750 156 aaKnown RBP5.4□□□□□ -1.55
BRCA1-215ENST00000478531 TMEM267Q0VDI3 215 aaPredicted RBP5.4□□□□□ -1.55
BRCA1-215ENST00000478531 FOXE3Q13461 319 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 C10orf55Q5SWW7 151 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 ZNF57Q68EA5 555 aaPredicted RBP5.4□□□□□ -1.55
BRCA1-215ENST00000478531 TOMM5Q8N4H5 51 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 COMMD1Q8N668 190 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 OR4F17Q8NGA8 305 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 TERB2Q8NHR7 220 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 VSTM2AQ8TAG5 236 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 CD300LFQ8TDQ1 290 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 OR4F4Q96R69 305 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 PRRT1Q99946 306 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 ZNF355PQ9NSJ1 428 aa5.4□□□□□ -1.55
BRCA1-215ENST00000478531 FOXA2Q9Y261 457 aaPredicted RBP5.4□□□□□ -1.55
BRCA1-215ENST00000478531 MARCH11A6NNE9 402 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 KRASP01116 189 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 ELANEP08246 267 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 ZNF735P0CB33 412 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 PTBP1P26599 531 aaKnown RBP eCLIP5.39□□□□□ -1.551e-7■■■■■ 45.2
BRCA1-215ENST00000478531 PSMB8P28062 276 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 PPIFP30405 207 aaKnown RBP5.39□□□□□ -1.55
BRCA1-215ENST00000478531 FAUP35544 74 aaKnown RBP5.39□□□□□ -1.55
BRCA1-215ENST00000478531 G6PCP35575 357 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 ETV6P41212 452 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 LPAR6P43657 344 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 INPP1P49441 399 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 CRIP2P52943 208 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-215ENST00000478531 AP3S2P59780 193 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 MRGPRG-AS1Q2M3A8 158 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 DEFB136Q30KP8 78 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 CNPY1Q3B7I2 92 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 TRIQKQ629K1 86 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 OR4A47Q6IF82 309 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 C8orf86Q6ZUL3 223 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 MMD2Q8IY49 270 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 OR5T1Q8NG75 326 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 ZFAND1Q8TCF1 268 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 SRSF12Q8WXF0 261 aaKnown RBP5.39□□□□□ -1.55
BRCA1-215ENST00000478531 MRGPRFQ96AM1 343 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 ZNF486Q96H40 463 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-215ENST00000478531 MS4A10Q96PG2 267 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 DUX3Q96PT4 197 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 OR5B12Q96R08 314 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 SRRQ9GZT4 340 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 KLK15Q9H2R5 256 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 PLEKHA2Q9HB19 425 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 TMEM140Q9NV12 185 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 COMMD9Q9P000 198 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 COPZ2Q9P299 210 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 SCP2D1Q9UJQ7 156 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 ZNF580Q9UK33 172 aa5.39□□□□□ -1.55
BRCA1-215ENST00000478531 C14orf166Q9Y224 244 aaKnown RBP5.39□□□□□ -1.55
BRCA1-215ENST00000478531 A6NHS1 94 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 MSGN1A6NI15 193 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 SOX15O60248 233 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 IGLV1-40P01703 118 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 SERPINE2P07093 398 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 MYOD1P15172 320 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 TPPP2P59282 170 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 RPL8P62917 257 aaKnown RBP5.38□□□□□ -1.55
BRCA1-215ENST00000478531 DEFA5Q01523 94 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 KLF9Q13886 244 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-215ENST00000478531 LINC01559Q495D7 138 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms