RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 SPATA2Q9UM82 520 aa10.99□□□□□ -0.65
SMARCE1-209ENST00000478349 OR2J3O76001 311 aa10.98□□□□□ -0.65
SMARCE1-209ENST00000478349 DEFA4P12838 97 aa10.98□□□□□ -0.65
SMARCE1-209ENST00000478349 CBX5P45973 191 aa10.98□□□□□ -0.65
SMARCE1-209ENST00000478349 CD81P60033 236 aa10.98□□□□□ -0.65
SMARCE1-209ENST00000478349 RPL8P62917 257 aaKnown RBP10.98□□□□□ -0.65
SMARCE1-209ENST00000478349 HAGHQ16775 308 aa10.98□□□□□ -0.65
SMARCE1-209ENST00000478349 SLC16A13Q7RTY0 426 aa10.98□□□□□ -0.65
SMARCE1-209ENST00000478349 MFSD4AQ8N468 514 aa10.98□□□□□ -0.65
SMARCE1-209ENST00000478349 BEST4Q8NFU0 473 aa10.98□□□□□ -0.65
SMARCE1-209ENST00000478349 EEF1AKMT3Q96AZ1 226 aa10.98□□□□□ -0.65
SMARCE1-209ENST00000478349 FYTTD1Q96QD9 318 aaKnown RBP10.98□□□□□ -0.65
SMARCE1-209ENST00000478349 DIABLOQ9NR28 239 aa10.98□□□□□ -0.65
SMARCE1-209ENST00000478349 SLC2A9Q9NRM0 540 aa10.98□□□□□ -0.65
SMARCE1-209ENST00000478349 TAS2R8Q9NYW2 309 aa10.98□□□□□ -0.65
SMARCE1-209ENST00000478349 FBXL7Q9UJT9 491 aa10.98□□□□□ -0.65
SMARCE1-209ENST00000478349 ELF5Q9UKW6 265 aaPredicted RBP10.98□□□□□ -0.65
SMARCE1-209ENST00000478349 LGALS9O00182 355 aa10.97□□□□□ -0.65
SMARCE1-209ENST00000478349 RBFOX2O43251 390 aaKnown RBP eCLIP10.97□□□□□ -0.65
SMARCE1-209ENST00000478349 PRH1P02810 166 aa10.97□□□□□ -0.65
SMARCE1-209ENST00000478349 ZNF45Q02386 682 aa10.97□□□□□ -0.65
SMARCE1-209ENST00000478349 FAM106AQ4KMX7 169 aa10.97□□□□□ -0.65
SMARCE1-209ENST00000478349 C10orf55Q5SWW7 151 aa10.97□□□□□ -0.65
SMARCE1-209ENST00000478349 OR4A47Q6IF82 309 aa10.97□□□□□ -0.65
SMARCE1-209ENST00000478349 PUSL1Q8N0Z8 303 aaKnown RBP10.97□□□□□ -0.65
SMARCE1-209ENST00000478349 OR13F1Q8NGS4 319 aa10.97□□□□□ -0.65
SMARCE1-209ENST00000478349 CD300LFQ8TDQ1 290 aa10.97□□□□□ -0.65
SMARCE1-209ENST00000478349 CXorf58Q96LI9 332 aa10.97□□□□□ -0.65
SMARCE1-209ENST00000478349 THAP7Q9BT49 309 aaPredicted RBP10.97□□□□□ -0.65
SMARCE1-209ENST00000478349 THYN1Q9P016 225 aa10.97□□□□□ -0.65
SMARCE1-209ENST00000478349 CEPT1Q9Y6K0 416 aa10.97□□□□□ -0.65
SMARCE1-209ENST00000478349 IGKV1D-13A0A0B4J2D9 117 aa10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 ZNF735P0CB33 412 aa10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 IGKV1-13P0DP09 117 aa10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 HLA-GP17693 338 aa10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 FCGR2CP31995 323 aa10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 SDC2P34741 201 aa10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 ARL3P36405 182 aa10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 RPL30P62888 115 aaKnown RBP10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 TIMM50Q3ZCQ8 353 aa10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 CD300EQ496F6 205 aaPredicted RBP10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 THOC7Q6I9Y2 204 aaKnown RBP10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 ZNF773Q6PK81 442 aa10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 CROCCP3Q8IVE0 287 aa10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 VKORC1L1Q8N0U8 176 aa10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 SECTM1Q8WVN6 248 aa10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 NEURL2Q9BR09 285 aa10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 EDA2RQ9HAV5 297 aa10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 HRASLSQ9HDD0 168 aa10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 BET1LQ9NYM9 111 aa10.96□□□□□ -0.65
SMARCE1-209ENST00000478349 TRAV18A0A075B6X5 111 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 TRBV7-1A0A0A6YYK4 115 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 LCE6AA0A183 80 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 HMX3A6NHT5 357 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 TEX22C9J3V5 150 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 SSX5O60225 188 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 PPYP01298 95 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 IGLV2-14P01704 120 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 FGF2P09038 288 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 PSMB6P28072 239 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 TAS2R31P59538 309 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 GUCA2BQ16661 112 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 ANKRD55Q3KP44 614 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 IDNKQ5T6J7 187 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 ZFAND6Q6FIF0 208 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 HOGA1Q86XE5 327 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 GPHB5Q86YW7 130 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 SPAG16Q8N0X2 631 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 SRSF8Q9BRL6 282 aaKnown RBP10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 COMMD5Q9GZQ3 224 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 SLC5A7Q9GZV3 580 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 PLEKHA3Q9HB20 300 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 ADAM30Q9UKF2 790 aa10.95□□□□□ -0.66
SMARCE1-209ENST00000478349 LOC100506127A0A0U1RQW1 187 aa10.94□□□□□ -0.66
SMARCE1-209ENST00000478349 C2orf70A6NJV1 201 aa10.94□□□□□ -0.66
SMARCE1-209ENST00000478349 RBMXL2O75526 392 aaKnown RBP10.94□□□□□ -0.66
SMARCE1-209ENST00000478349 ATP6V1G2O95670 118 aa10.94□□□□□ -0.66
SMARCE1-209ENST00000478349 HPRT1P00492 218 aa10.94□□□□□ -0.66
SMARCE1-209ENST00000478349 CRYGCP07315 174 aa10.94□□□□□ -0.66
SMARCE1-209ENST00000478349 FOLR2P14207 255 aa10.94□□□□□ -0.66
SMARCE1-209ENST00000478349 NQO2P16083 231 aa10.94□□□□□ -0.66
SMARCE1-209ENST00000478349 MECP2P51608 486 aaKnown RBP10.94□□□□□ -0.66
SMARCE1-209ENST00000478349 HERV-K104P61576 105 aa10.94□□□□□ -0.66
SMARCE1-209ENST00000478349 ERVK-16P61578 105 aa10.94□□□□□ -0.66
SMARCE1-209ENST00000478349 MXD1Q05195 221 aa10.94□□□□□ -0.66
SMARCE1-209ENST00000478349 EIF4EBP1Q13541 118 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-209ENST00000478349 SSX9Q7RTT3 188 aa10.94□□□□□ -0.66
SMARCE1-209ENST00000478349 HSD17B13Q7Z5P4 300 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-209ENST00000478349 MARC2Q969Z3 335 aa10.94□□□□□ -0.66
SMARCE1-209ENST00000478349 IFT46Q9NQC8 304 aa10.94□□□□□ -0.66
SMARCE1-209ENST00000478349 ZC4H2Q9NQZ6 224 aa10.94□□□□□ -0.66
SMARCE1-209ENST00000478349 ZNF320A2RRD8 509 aa10.93□□□□□ -0.66
SMARCE1-209ENST00000478349 IZUMO1RA6ND01 250 aa10.93□□□□□ -0.66
SMARCE1-209ENST00000478349 A8MWP6 167 aa10.93□□□□□ -0.66
SMARCE1-209ENST00000478349 PPP5D1E7EU14 171 aa10.93□□□□□ -0.66
SMARCE1-209ENST00000478349 TNFSF12O43508 249 aa10.93□□□□□ -0.66
SMARCE1-209ENST00000478349 JTBO76095 146 aa10.93□□□□□ -0.66
SMARCE1-209ENST00000478349 OR2C1O95371 312 aa10.93□□□□□ -0.66
SMARCE1-209ENST00000478349 IL6RP08887 468 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-209ENST00000478349 CTRB1P17538 263 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms