RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 UBDO15205 165 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 CCL25O15444 150 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 SHOX2O60902 331 aaPredicted RBP-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 KRT7P08729 469 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 TFPTP0C1Z6 253 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 HIST1H1CP16403 213 aaKnown RBP-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 MSNP26038 577 aaKnown RBP-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 CA7P43166 264 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 FXYD7P58549 80 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 DSTNP60981 165 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 HERVK_113P63121 156 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 ASB16-AS1Q495Z4 193 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 HBMQ6B0K9 141 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 LINC00322Q6ZN03 302 aaPredicted RBP-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 ZNF550Q7Z398 422 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 LINC00311Q8N616 119 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 FBXO36Q8NEA4 188 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 TET1Q8NFU7 2136 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 CDKL2Q92772 493 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 LRRC39Q96DD0 335 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 OR8D2Q9GZM6 311 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 DCSTAMPQ9H295 470 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 NAT8Q9UHE5 227 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 TIMM22Q9Y584 194 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 V9GYY9 64 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 CCDC88AQ3V6T2 1871 aa-0.87□□□□□ -2.55
NCKAP1-204ENST00000477988 PLXNA4Q9HCM2 1894 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 OR6C6A6NF89 314 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 ZNF736B4DX44 427 aaPredicted RBP-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 KCNK1O00180 336 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 GPR171O14626 319 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 NOS1APO75052 506 aaPredicted RBP-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 DNAL4O96015 105 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 METTL15P1P0C7V9 234 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 CCL4P13236 92 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 TUBG1P23258 451 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 FKBP2P26885 142 aaKnown RBP-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 SLCO1A2P46721 670 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 FXYD2P54710 66 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 OR4D2P58180 307 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 SNAP25P60880 206 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 TRIP13Q15645 432 aaPredicted RBP-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 RAB11BQ15907 218 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 BSXQ3C1V8 233 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 C1orf137Q5JT78 98 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 SBSNQ6UWP8 590 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 LYG2Q86SG7 212 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 GPHB5Q86YW7 130 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 C10orf67Q8IYJ2 551 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 NATD1Q8N6N6 113 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 PXT1Q8NFP0 134 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 OR52K2Q8NGK3 314 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 OR6K2Q8NGY2 324 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 OR6N2Q8NGY6 317 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 FAM45AQ8TCE6 357 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 MITD1Q8WV92 249 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 ITFG2Q969R8 447 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 SLC50A1Q9BRV3 221 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 COMMD5Q9GZQ3 224 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 SYT4Q9H2B2 425 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 PROK2Q9HC23 129 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 TUBG2Q9NRH3 451 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 DMAC2Q9NW81 257 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 HPCAL4Q9UM19 191 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 SNX10Q9Y5X0 201 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 KIAA1109Q2LD37 5005 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 FANCMQ8IYD8 2048 aa-0.88□□□□□ -2.55
NCKAP1-204ENST00000477988 PHLPP2Q6ZVD8 1323 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 TGP01266 2768 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 SIP14410 1827 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 PTPRQQ9UMZ3 2332 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 TRAV1-1A0A0B4J248 108 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 C5orf67F2Z3F1 127 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 WRBO00258 174 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 MRASO14807 208 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 OR5F1O95221 314 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 NSA2O95478 260 aaKnown RBP-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 CTSDP07339 412 aaPredicted RBP-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 MIFP14174 115 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 RPA3P35244 121 aaPredicted RBP-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 ZNF80P51504 273 aaPredicted RBP-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 FXYD6P3P58550 94 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 SUPT4H1P63272 117 aaKnown RBP-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 HLA-DRB3P79483 266 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 DMTNQ08495 405 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 IL18Q14116 193 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 TRAM1Q15629 374 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 FAHD1Q6P587 224 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 PRR15Q8IV56 129 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 GPX8Q8TED1 209 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 ACOT12Q8WYK0 555 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 CIDECQ96AQ7 238 aaPredicted RBP-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 MS4A6EQ96DS6 147 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 CIB1Q99828 191 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 MAP1LC3CQ9BXW4 147 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 XAGE1AQ9HD64 81 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 RASL12Q9NYN1 266 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 MAT2BQ9NZL9 334 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 EMC3Q9P0I2 261 aa-0.89□□□□□ -2.55
NCKAP1-204ENST00000477988 CD300AQ9UGN4 299 aa-0.89□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms