RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 CGB7P0DN87 165 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 IGKV1-13P0DP09 117 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 PI3P19957 117 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 S100GP29377 79 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 GPR12P47775 334 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 MECP2P51608 486 aaKnown RBP7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 UCP3P55916 312 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 UBE2MP61081 183 aaKnown RBP7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 GNB1P62873 340 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 PMS2P11Q13670 270 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 FAM53AQ6NSI3 398 aaPredicted RBP7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 HAPLN4Q86UW8 402 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 THNSL2Q86YJ6 484 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 CCDC71LQ8N9Z2 235 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 OR52M1Q8NGK5 317 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 DLX4Q92988 240 aaPredicted RBP7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 ZNF486Q96H40 463 aaPredicted RBP7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 NABP2Q9BQ15 211 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 ABHD14AQ9BUJ0 271 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 SLC5A7Q9GZV3 580 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 TOLLIPQ9H0E2 274 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 PARP12Q9H0J9 701 aaKnown RBP7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 OR2D2Q9H210 308 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 C5orf66Q9H5L9 145 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 TUBA4BQ9H853 241 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 GNB4Q9HAV0 340 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 ALG5Q9Y673 324 aa7.47□□□□□ -1.21
SMARCB1-206ENST00000477836 C7orf66A4D0T2 115 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 CXorf65A6NEN9 183 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 LY6LH3BQJ8 138 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 TOR1AO14656 332 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 HSD17B6O14756 317 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 YPEL1O60688 119 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 HLA-AP01891 365 aaKnown RBP7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 IL5P05113 134 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 OR8U9P0C7N5 309 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 AKR1C4P17516 323 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 VAMP1P23763 118 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 GNG10P50151 68 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 RAB7AP51149 207 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 SLURP1P55000 103 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 CBX3Q13185 183 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 HLA-DRB5Q30154 266 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 PHLDA2Q53GA4 152 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 ACSM6Q6P461 480 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 GLDNQ6ZMI3 551 aaPredicted RBP7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 SLC25A42Q86VD7 318 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 CMTM1Q8IZ96 169 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 ADAD2Q8NCV1 583 aaKnown RBP7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 ARPC1AQ92747 370 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 LEAP2Q969E1 77 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 YPEL2Q96QA6 119 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 RSRP1Q9BUV0 290 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 HIPK2Q9H2X6 1198 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 SLC2A9Q9NRM0 540 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 GPR132Q9UNW8 380 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 PKD1P98161 4303 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 KIAA2026Q5HYC2 2103 aa7.46□□□□□ -1.22
SMARCB1-206ENST00000477836 TEX13DA0A0J9YY54 714 aaPredicted RBP7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 NCBP2LA6PVI3 153 aaKnown RBP7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 OOSP1A8MZH6 123 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 GPR31O00270 319 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 ITGB1BP1O14713 200 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 ST8SIA5O15466 376 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 SSNA1O43805 119 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 CREBL2O60519 120 aaPredicted RBP7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 SLC22A5O76082 557 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 IGKV1D-33P01593 117 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 IGKV1-33P01594 117 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 IGHG4P01861 327 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 OR4E1P0C645 316 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 ANXA3P12429 323 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 VDAC1P21796 283 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 PSMB8P28062 276 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 GNRHRP30968 328 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 PIGPP57054 158 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 RND3P61587 244 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 CFHR3Q02985 330 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 DHRS2Q13268 280 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 PPP1R1AQ13522 171 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 MSMO1Q15800 293 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 Q3ZCU0 254 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 MORN2Q502X0 79 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 TMEM128Q5BJH2 165 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 LY6G6FQ5SQ64 297 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 LYG2Q86SG7 212 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 ZNF645Q8N7E2 425 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 RTN4IP1Q8WWV3 396 aaPredicted RBP7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 TMEM230Q96A57 120 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 RPEQ96AT9 228 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 UBE2E2Q96LR5 201 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 OR4C12Q96R67 309 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 SEC22CQ9BRL7 303 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 RTBDNQ9BSG5 229 aaPredicted RBP7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 ALX4Q9H161 411 aaPredicted RBP7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 IFI27L2Q9H2X8 130 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 CCL28Q9NRJ3 127 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 PSG11Q9UQ72 335 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 TNCP24821 2201 aa7.45□□□□□ -1.22
SMARCB1-206ENST00000477836 A0A087X0M5 115 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms