RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 SFT2D2O95562 160 aa15.75■□□□□ 0.11
ACTB-210ENST00000477812 CA2P00918 260 aa15.75■□□□□ 0.11
ACTB-210ENST00000477812 OR4E1P0C645 316 aa15.75■□□□□ 0.11
ACTB-210ENST00000477812 CX3CL1P78423 397 aa15.75■□□□□ 0.11
ACTB-210ENST00000477812 DHRS2Q13268 280 aa15.75■□□□□ 0.11
ACTB-210ENST00000477812 PLGLAQ15195 96 aa15.75■□□□□ 0.11
ACTB-210ENST00000477812 OR4F5Q8NH21 305 aa15.75■□□□□ 0.11
ACTB-210ENST00000477812 VSTM2AQ8TAG5 236 aa15.75■□□□□ 0.11
ACTB-210ENST00000477812 KCNIP3Q9Y2W7 256 aa15.75■□□□□ 0.11
ACTB-210ENST00000477812 COL6A5A8TX70 2615 aa15.74■□□□□ 0.11
ACTB-210ENST00000477812 C9orf170A2RU37 121 aa15.74■□□□□ 0.11
ACTB-210ENST00000477812 H2AFB2P0C5Z0 115 aa15.74■□□□□ 0.11
ACTB-210ENST00000477812 SPNP16150 400 aa15.74■□□□□ 0.11
ACTB-210ENST00000477812 MDKP21741 143 aaPredicted RBP15.74■□□□□ 0.11
ACTB-210ENST00000477812 VAMP1P23763 118 aa15.74■□□□□ 0.11
ACTB-210ENST00000477812 ERVK-16P61578 105 aa15.74■□□□□ 0.11
ACTB-210ENST00000477812 TRIM16LQ309B1 348 aa15.74■□□□□ 0.11
ACTB-210ENST00000477812 ANKRD55Q3KP44 614 aa15.74■□□□□ 0.11
ACTB-210ENST00000477812 C9orf152Q5JTZ5 239 aa15.74■□□□□ 0.11
ACTB-210ENST00000477812 ZNF562Q6V9R5 426 aa15.74■□□□□ 0.11
ACTB-210ENST00000477812 SELENOHQ8IZQ5 122 aaKnown RBP15.74■□□□□ 0.11
ACTB-210ENST00000477812 DMBX1Q8NFW5 382 aa15.74■□□□□ 0.11
ACTB-210ENST00000477812 OR4A5Q8NH83 315 aa15.74■□□□□ 0.11
ACTB-210ENST00000477812 OR2T6Q8NHC8 308 aa15.74■□□□□ 0.11
ACTB-210ENST00000477812 RBPMSQ93062 196 aaKnown RBP15.74■□□□□ 0.11
ACTB-210ENST00000477812 IL22RA2Q969J5 263 aa15.74■□□□□ 0.11
ACTB-210ENST00000477812 CLCC1Q96S66 551 aa15.74■□□□□ 0.11
ACTB-210ENST00000477812 MMP24Q9Y5R2 645 aa15.74■□□□□ 0.11
ACTB-210ENST00000477812 TRAV3A0A0B4J244 114 aa15.73■□□□□ 0.11
ACTB-210ENST00000477812 UPK2O00526 184 aa15.73■□□□□ 0.11
ACTB-210ENST00000477812 PTTG1O95997 202 aa15.73■□□□□ 0.11
ACTB-210ENST00000477812 FGF2P09038 288 aa15.73■□□□□ 0.11
ACTB-210ENST00000477812 ANXA3P12429 323 aa15.73■□□□□ 0.11
ACTB-210ENST00000477812 SLC35E3Q7Z769 313 aa15.73■□□□□ 0.11
ACTB-210ENST00000477812 LYG2Q86SG7 212 aa15.73■□□□□ 0.11
ACTB-210ENST00000477812 LRTM2Q8N967 370 aa15.73■□□□□ 0.11
ACTB-210ENST00000477812 TMEM158Q8WZ71 300 aa15.73■□□□□ 0.11
ACTB-210ENST00000477812 WNT10AQ9GZT5 417 aa15.73■□□□□ 0.11
ACTB-210ENST00000477812 OR51J1Q9H342 316 aa15.73■□□□□ 0.11
ACTB-210ENST00000477812 BEX1Q9HBH7 125 aa15.73■□□□□ 0.11
ACTB-210ENST00000477812 ZNF580Q9UK33 172 aa15.73■□□□□ 0.11
ACTB-210ENST00000477812 FBXO7Q9Y3I1 522 aa15.73■□□□□ 0.11
ACTB-210ENST00000477812 A0A0G2JRQ6 117 aa15.72■□□□□ 0.11
ACTB-210ENST00000477812 CLPSL1A2RUU4 121 aa15.72■□□□□ 0.11
ACTB-210ENST00000477812 KCNAB3O43448 404 aa15.72■□□□□ 0.11
ACTB-210ENST00000477812 HLA-AP01891 365 aaKnown RBP15.72■□□□□ 0.11
ACTB-210ENST00000477812 IGF1P05019 195 aa15.72■□□□□ 0.11
ACTB-210ENST00000477812 EGR2P11161 476 aaPredicted RBP15.72■□□□□ 0.11
ACTB-210ENST00000477812 CRIP2P52943 208 aaPredicted RBP15.72■□□□□ 0.11
ACTB-210ENST00000477812 PROK1P58294 105 aa15.72■□□□□ 0.11
ACTB-210ENST00000477812 SRPXP78539 464 aa15.72■□□□□ 0.11
ACTB-210ENST00000477812 TMEM268Q5VZI3 342 aa15.72■□□□□ 0.11
ACTB-210ENST00000477812 MMD2Q8IY49 270 aa15.72■□□□□ 0.11
ACTB-210ENST00000477812 WIPF2Q8TF74 440 aaPredicted RBP15.72■□□□□ 0.11
ACTB-210ENST00000477812 MARVELD1Q9BSK0 173 aa15.72■□□□□ 0.11
ACTB-210ENST00000477812 ATP6V0E1O15342 81 aa15.71■□□□□ 0.11
ACTB-210ENST00000477812 CREBL2O60519 120 aaPredicted RBP15.71■□□□□ 0.11
ACTB-210ENST00000477812 OR9G9P0C7N8 305 aa15.71■□□□□ 0.11
ACTB-210ENST00000477812 VDAC2P45880 294 aaPredicted RBP15.71■□□□□ 0.11
ACTB-210ENST00000477812 COMPP49747 757 aaPredicted RBP15.71■□□□□ 0.11
ACTB-210ENST00000477812 RAB25P57735 213 aa15.71■□□□□ 0.11
ACTB-210ENST00000477812 C4orf46Q504U0 113 aa15.71■□□□□ 0.11
ACTB-210ENST00000477812 C19orf54Q5BKX5 351 aa15.71■□□□□ 0.11
ACTB-210ENST00000477812 C10orf55Q5SWW7 151 aa15.71■□□□□ 0.11
ACTB-210ENST00000477812 ZNF695Q8IW36 515 aa15.71■□□□□ 0.11
ACTB-210ENST00000477812 LGI3Q8N145 548 aa15.71■□□□□ 0.11
ACTB-210ENST00000477812 SLC35G3Q8N808 338 aa15.71■□□□□ 0.11
ACTB-210ENST00000477812 A0A0B4J2A0 478 aa15.7■□□□□ 0.1
ACTB-210ENST00000477812 A0A1B0GUS0 222 aa15.7■□□□□ 0.1
ACTB-210ENST00000477812 DUS4LO95620 317 aaKnown RBP15.7■□□□□ 0.1
ACTB-210ENST00000477812 HLA-GP17693 338 aa15.7■□□□□ 0.1
ACTB-210ENST00000477812 AKR1C2P52895 323 aa15.7■□□□□ 0.1
ACTB-210ENST00000477812 RPL8P62917 257 aaKnown RBP15.7■□□□□ 0.1
ACTB-210ENST00000477812 FOXL1Q12952 345 aa15.7■□□□□ 0.1
ACTB-210ENST00000477812 FXYD3Q14802 87 aa15.7■□□□□ 0.1
ACTB-210ENST00000477812 IZUMO4Q1ZYL8 232 aa15.7■□□□□ 0.1
ACTB-210ENST00000477812 KRTAP21-3Q3LHN1 58 aa15.7■□□□□ 0.1
ACTB-210ENST00000477812 AWAT1Q58HT5 328 aa15.7■□□□□ 0.1
ACTB-210ENST00000477812 NMSQ5H8A3 153 aa15.7■□□□□ 0.1
ACTB-210ENST00000477812 PLET1Q6UQ28 207 aa15.7■□□□□ 0.1
ACTB-210ENST00000477812 OR52B4Q8NGK2 314 aa15.7■□□□□ 0.1
ACTB-210ENST00000477812 CASTOR1Q8WTX7 329 aa15.7■□□□□ 0.1
ACTB-210ENST00000477812 ARPC1AQ92747 370 aa15.7■□□□□ 0.1
ACTB-210ENST00000477812 NOL4LQ96MY1 436 aaPredicted RBP15.7■□□□□ 0.1
ACTB-210ENST00000477812 SHPKQ9UHJ6 478 aa15.7■□□□□ 0.1
ACTB-210ENST00000477812 TENM1Q9UKZ4 2725 aa15.7■□□□□ 0.1
ACTB-210ENST00000477812 A0A1B0GW64 132 aa15.69■□□□□ 0.1
ACTB-210ENST00000477812 DBX1A6NMT0 343 aa15.69■□□□□ 0.1
ACTB-210ENST00000477812 AP4M1O00189 453 aa15.69■□□□□ 0.1
ACTB-210ENST00000477812 ATG12O94817 140 aa15.69■□□□□ 0.1
ACTB-210ENST00000477812 MYOD1P15172 320 aa15.69■□□□□ 0.1
ACTB-210ENST00000477812 MAS1LP35410 378 aa15.69■□□□□ 0.1
ACTB-210ENST00000477812 GNB1P62873 340 aa15.69■□□□□ 0.1
ACTB-210ENST00000477812 H2BFWTQ7Z2G1 175 aa15.69■□□□□ 0.1
ACTB-210ENST00000477812 LYZL2Q7Z4W2 148 aa15.69■□□□□ 0.1
ACTB-210ENST00000477812 LSM10Q969L4 123 aaKnown RBP15.69■□□□□ 0.1
ACTB-210ENST00000477812 SEC22CQ9BRL7 303 aa15.69■□□□□ 0.1
ACTB-210ENST00000477812 PARP11Q9NR21 331 aa15.69■□□□□ 0.1
ACTB-210ENST00000477812 TMEM14BQ9NUH8 114 aa15.69■□□□□ 0.1
ACTB-210ENST00000477812 RNF114Q9Y508 228 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms