RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TP53TG1Q9Y2A0 90 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 PRELID3BQ9Y3B1 194 aa4.97□□□□□ -1.61
RTFDC1-206ENST00000477485 TRBV6-7A0A0A0MS04 114 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 TRAV25A0A0B4J276 109 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 MFSD2BA6NFX1 497 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 NPIPB5A8MRT5 1133 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 TEX22C9J3V5 150 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 PTGES3LE9PB15 166 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 UBE2CO00762 179 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 XRCC3O43542 346 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 KBTBD11O94819 623 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 CLEC3BP05452 202 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 AREGP15514 252 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 RPA2P15927 270 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 HIST1H1BP16401 226 aaKnown RBP4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 GNB3P16520 340 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 CD36P16671 472 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 CTRB1P17538 263 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 FCGR2BP31994 310 aaPredicted RBP4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 C2orf76Q3KRA6 126 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 LIPKQ5VXJ0 399 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 CTRB2Q6GPI1 263 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 PLET1Q6UQ28 207 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 UNQ9165/PRO28630Q6UXU0 137 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 WFDC3Q8IUB2 231 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 FAM89BQ8N5H3 189 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 ZNF645Q8N7E2 425 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 OR4S2Q8NH73 311 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 VSTM2AQ8TAG5 236 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 C11orf45Q8TAV5 145 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 UFD1Q92890 307 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 FAM3DQ96BQ1 224 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 RNF183Q96D59 192 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 OR2A7Q96R45 310 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 CABLES2Q9BTV7 478 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 C20orf24Q9BUV8 137 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 C6orf62Q9GZU0 229 aaPredicted RBP4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 OR51E2Q9H255 320 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 HRASLSQ9HDD0 168 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 MRPL27Q9P0M9 148 aaKnown RBP4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 PSORS1C1Q9UIG5 152 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 SPATA2Q9UM82 520 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 UFC1Q9Y3C8 167 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 DMRT1Q9Y5R6 373 aa4.96□□□□□ -1.62
RTFDC1-206ENST00000477485 IGKV3-7A0A075B6H7 116 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 IGHV3OR16-8A0A075B7F1 116 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 TRBV7-1A0A0A6YYK4 115 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 TMEM272A0A1B0GTI8 110 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 OR4C46A6NHA9 309 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 FOXI3A8MTJ6 420 aaPredicted RBP4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 E7EUB6 86 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 DEFB4AO15263 64 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 ZNF207O43670 478 aaKnown RBP4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 ARL6IP5O75915 188 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 IL6RP08887 468 aaPredicted RBP4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 GNAO1P09471 354 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 UCHL1P09936 223 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 MYOD1P15172 320 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 NFYAP23511 347 aaPredicted RBP4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 CALRP27797 417 aaKnown RBP4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 PSMB6P28072 239 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 TFPI2P48307 235 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 PLA2G7Q13093 441 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 SPHARQ15513 63 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 LAMTOR1Q6IAA8 161 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 APRG1Q8IVJ8 170 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 H1FOOQ8IZA3 346 aaPredicted RBP4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 UBAC2Q8NBM4 344 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 OR10R2Q8NGX6 335 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 CD300LFQ8TDQ1 290 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 C2CD4CQ8TF44 421 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 MARC2Q969Z3 335 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 GALNT14Q96FL9 552 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 CXorf58Q96LI9 332 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 GFI1Q99684 422 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 SPAG8Q99932 426 aaPredicted RBP4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 RARRES2Q99969 163 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 MFFQ9GZY8 342 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 SLC2A9Q9NRM0 540 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 TAS2R8Q9NYW2 309 aa4.95□□□□□ -1.62
RTFDC1-206ENST00000477485 IGHV3-21A0A0B4J1V1 117 aa4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 OR2T8A6NH00 312 aa4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 IGLL5B9A064 214 aa4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 TGOLN2O43493 480 aa4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 TNFSF12O43508 249 aa4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 S1PR2O95136 353 aa4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 HRASP01112 189 aa4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 CDK1P06493 297 aa4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 MAS1LP35410 378 aa4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 RANBP1P43487 201 aa4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 RPS25P62851 125 aaKnown RBP4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 RPL30P62888 115 aaKnown RBP4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 RPL8P62917 257 aaKnown RBP4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 ZNF124Q15973 351 aa4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 ODF3L2Q3SX64 289 aa4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 FANCD2OSQ96PS1 177 aa4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 GPHA2Q96T91 129 aa4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 CCDC90BQ9GZT6 254 aa4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 ATG5Q9H1Y0 275 aa4.94□□□□□ -1.62
RTFDC1-206ENST00000477485 C5orf66Q9H5L9 145 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms